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Results: 19

1.

Stage-dependent and locus-specific role of histone demethylase Jumonji D3 (JMJD3) in the embryonic stages of lung development.

Li Q, Wang HY, Chepelev I, Zhu Q, Wei G, Zhao K, Wang RF.

PLoS Genet. 2014 Jul 31;10(7):e1004524. doi: 10.1371/journal.pgen.1004524. eCollection 2014 Jul.

PMID:
25079229
[PubMed - in process]
Free PMC Article
2.

Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition.

Maunakea AK, Chepelev I, Cui K, Zhao K.

Cell Res. 2013 Nov;23(11):1256-69. doi: 10.1038/cr.2013.110. Epub 2013 Aug 13.

PMID:
23938295
[PubMed - in process]
Free PMC Article
3.

Alternative splicing switching in stem cell lineages.

Chepelev I, Chen X.

Front Biol (Beijing). 2013 Feb 1;8(1):50-59.

PMID:
23399987
[PubMed]
Free PMC Article
4.

Common inversion polymorphism at 17q21.31 affects expression of multiple genes in tissue-specific manner.

de Jong S, Chepelev I, Janson E, Strengman E, van den Berg LH, Veldink JH, Ophoff RA.

BMC Genomics. 2012 Sep 6;13:458. doi: 10.1186/1471-2164-13-458.

PMID:
22950410
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins.

LeRoy G, Chepelev I, DiMaggio PA, Blanco MA, Zee BM, Zhao K, Garcia BA.

Genome Biol. 2012 Aug 16;13(8):R68. doi: 10.1186/gb-2012-13-8-r68.

PMID:
22897906
[PubMed - in process]
Free PMC Article
6.

Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization.

Chepelev I, Wei G, Wangsa D, Tang Q, Zhao K.

Cell Res. 2012 Mar;22(3):490-503. doi: 10.1038/cr.2012.15. Epub 2012 Jan 24.

PMID:
22270183
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Detection of RNA editing events in human cells using high-throughput sequencing.

Chepelev I.

Methods Mol Biol. 2012;815:91-102. doi: 10.1007/978-1-61779-424-7_8.

PMID:
22130986
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A barrier-only boundary element delimits the formation of facultative heterochromatin in Drosophila melanogaster and vertebrates.

Lin N, Li X, Cui K, Chepelev I, Tie F, Liu B, Li G, Harte P, Zhao K, Huang S, Zhou L.

Mol Cell Biol. 2011 Jul;31(13):2729-41. doi: 10.1128/MCB.05165-11. Epub 2011 Apr 25.

PMID:
21518956
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription.

Xu Z, Wei G, Chepelev I, Zhao K, Felsenfeld G.

Nat Struct Mol Biol. 2011 Mar;18(3):372-8. doi: 10.1038/nsmb.1993. Epub 2011 Feb 20.

PMID:
21336277
[PubMed - indexed for MEDLINE]
10.

Tissue-specific expression of IL-15RA alternative splicing transcripts and its regulation by DNA methylation.

Diniz SN, Pendeloski KP, Morgun A, Chepelev I, Gerbase-DeLima M, Shulzhenko N.

Eur Cytokine Netw. 2010 Dec;21(4):308-18. doi: 10.1684/ecn.2010.0218. Epub 2010 Nov 24.

PMID:
21097393
[PubMed - indexed for MEDLINE]
11.

Cell fate determination factor Dachshund reprograms breast cancer stem cell function.

Wu K, Jiao X, Li Z, Katiyar S, Casimiro MC, Yang W, Zhang Q, Willmarth NE, Chepelev I, Crosariol M, Wei Z, Hu J, Zhao K, Pestell RG.

J Biol Chem. 2011 Jan 21;286(3):2132-42. doi: 10.1074/jbc.M110.148395. Epub 2010 Oct 11.

PMID:
20937839
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Prediction of quantitative phenotypes based on genetic networks: a case study in yeast sporulation.

Shen L, Chepelev I, Liu J, Wang W.

BMC Syst Biol. 2010 Sep 10;4:128. doi: 10.1186/1752-0509-4-128.

PMID:
20828418
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Epigenome mapping in normal and disease States.

Maunakea AK, Chepelev I, Zhao K.

Circ Res. 2010 Aug 6;107(3):327-39. doi: 10.1161/CIRCRESAHA.110.222463. Review.

PMID:
20689072
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq.

Gan Q, Chepelev I, Wei G, Tarayrah L, Cui K, Zhao K, Chen X.

Cell Res. 2010 Jul;20(7):763-83. doi: 10.1038/cr.2010.64. Epub 2010 May 4.

PMID:
20440302
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes.

Barski A, Chepelev I, Liko D, Cuddapah S, Fleming AB, Birch J, Cui K, White RJ, Zhao K.

Nat Struct Mol Biol. 2010 May;17(5):629-34. doi: 10.1038/nsmb.1806. Epub 2010 Apr 25.

PMID:
20418881
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Attenuation of Forkhead signaling by the retinal determination factor DACH1.

Zhou J, Wang C, Wang Z, Dampier W, Wu K, Casimiro MC, Chepelev I, Popov VM, Quong A, Tozeren A, Zhao K, Lisanti MP, Pestell RG.

Proc Natl Acad Sci U S A. 2010 Apr 13;107(15):6864-9. doi: 10.1073/pnas.1002746107. Epub 2010 Mar 29.

PMID:
20351289
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq.

Chepelev I, Wei G, Tang Q, Zhao K.

Nucleic Acids Res. 2009 Sep;37(16):e106. doi: 10.1093/nar/gkp507. Epub 2009 Jun 15.

PMID:
19528076
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Prediction of regulatory elements in mammalian genomes using chromatin signatures.

Won KJ, Chepelev I, Ren B, Wang W.

BMC Bioinformatics. 2008 Dec 18;9:547. doi: 10.1186/1471-2105-9-547.

PMID:
19094206
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

High-resolution profiling of histone methylations in the human genome.

Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K.

Cell. 2007 May 18;129(4):823-37.

PMID:
17512414
[PubMed - indexed for MEDLINE]
Free Article

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