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Results: 1 to 20 of 37

1.

Modelling nutrition across organizational levels: From individuals to superorganisms.

Lihoreau M, Buhl J, Charleston MA, Sword GA, Raubenheimer D, Simpson SJ.

J Insect Physiol. 2014 Mar 28. pii: S0022-1910(14)00045-6. doi: 10.1016/j.jinsphys.2014.03.004. [Epub ahead of print]

PMID:
24681322
[PubMed - as supplied by publisher]
2.

A simple model explains the dynamics of preferential host switching among mammal RNA viruses.

Cuthill JH, Charleston MA.

Evolution. 2013 Apr;67(4):980-90. doi: 10.1111/evo.12064. Epub 2013 Feb 19.

PMID:
23550750
[PubMed - indexed for MEDLINE]
3.

Active subnetwork recovery with a mechanism-dependent scoring function; with application to angiogenesis and organogenesis studies.

Lichtenstein I, Charleston MA, Caetano TS, Gamble JR, Vadas MA.

BMC Bioinformatics. 2013 Feb 21;14:59. doi: 10.1186/1471-2105-14-59.

PMID:
23432934
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies.

Cuthill JH, Charleston M.

PLoS One. 2012;7(5):e36464. doi: 10.1371/journal.pone.0036464. Epub 2012 May 7.

PMID:
22586474
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Verification of phylogenetic inference programs using metamorphic testing.

Sadi MS, Kuo FC, Ho JW, Charleston MA, Chen TY.

J Bioinform Comput Biol. 2011 Dec;9(6):729-47.

PMID:
22084011
[PubMed - indexed for MEDLINE]
6.

Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species.

Nascimento FF, Gongora J, Charleston M, Tristem M, Lowden S, Moran C.

BMC Evol Biol. 2011 May 24;11:139. doi: 10.1186/1471-2148-11-139.

PMID:
21609472
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Hierarchical kernel mixture models for the prediction of AIDS disease progression using HIV structural gp120 profiles.

Yoo PD, Shwen Ho Y, Ng J, Charleston M, Saksena NK, Yang P, Zomaya AY.

BMC Genomics. 2010 Dec 2;11 Suppl 4:S22. doi: 10.1186/1471-2164-11-S4-S22.

PMID:
21143806
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A model selection approach to discover age-dependent gene expression patterns using quantile regression models.

Ho JW, Stefani M, dos Remedios CG, Charleston MA.

BMC Genomics. 2009 Dec 3;10 Suppl 3:S16. doi: 10.1186/1471-2164-10-S3-S16.

PMID:
19958479
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Phylogenetic estimation with partial likelihood tensors.

Sumner JG, Charleston MA.

J Theor Biol. 2010 Feb 7;262(3):413-24. doi: 10.1016/j.jtbi.2009.09.037. Epub 2009 Oct 12.

PMID:
19822153
[PubMed - indexed for MEDLINE]
10.

Insights into the evolutionary history of an emerging livestock pathogen: porcine circovirus 2.

Firth C, Charleston MA, Duffy S, Shapiro B, Holmes EC.

J Virol. 2009 Dec;83(24):12813-21. doi: 10.1128/JVI.01719-09. Epub 2009 Oct 7.

PMID:
19812157
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Modelling nutritional interactions: from individuals to communities.

Simpson SJ, Raubenheimer D, Charleston MA, Clissold FJ; ARC-NZ Vegetation Function Network Herbivory Working Group.

Trends Ecol Evol. 2010 Jan;25(1):53-60. doi: 10.1016/j.tree.2009.06.012. Epub 2009 Aug 13. Review.

PMID:
19683361
[PubMed - indexed for MEDLINE]
12.

On the computational complexity of the reticulate cophylogeny reconstruction problem.

Libeskind-Hadas R, Charleston MA.

J Comput Biol. 2009 Jan;16(1):105-17. doi: 10.1089/cmb.2008.0084.

PMID:
19119995
[PubMed - indexed for MEDLINE]
13.

Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence.

Ramsden C, Holmes EC, Charleston MA.

Mol Biol Evol. 2009 Jan;26(1):143-53. doi: 10.1093/molbev/msn234. Epub 2008 Oct 14.

PMID:
18922760
[PubMed - indexed for MEDLINE]
Free Article
14.

Differential variability analysis of gene expression and its application to human diseases.

Ho JW, Stefani M, dos Remedios CG, Charleston MA.

Bioinformatics. 2008 Jul 1;24(13):i390-8. doi: 10.1093/bioinformatics/btn142.

PMID:
18586739
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Markov invariants, plethysms, and phylogenetics.

Sumner JG, Charleston MA, Jermiin LS, Jarvis PD.

J Theor Biol. 2008 Aug 7;253(3):601-15. doi: 10.1016/j.jtbi.2008.04.001. Epub 2008 Apr 7.

PMID:
18513747
[PubMed - indexed for MEDLINE]
16.

HIV-1 gp120 N-linked glycosylation differs between plasma and leukocyte compartments.

Ho YS, Abecasis AB, Theys K, Deforche K, Dwyer DE, Charleston M, Vandamme AM, Saksena NK.

Virol J. 2008 Jan 23;5:14. doi: 10.1186/1743-422X-5-14.

PMID:
18215327
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Inferring differential leukocyte activity from antibody microarrays using a latent variable model.

Ho JW, Koundinya R, Caetano TS, dos Remedios CG, Charleston MA.

Genome Inform. 2008;21:126-37.

PMID:
19425153
[PubMed - indexed for MEDLINE]
Free Article
18.

Lability of antiretroviral drug resistance mutations--correlates with immunological and virological responses.

Al Mazari A, Zomaya AY, Charleston M, Salem H, Maher A, Garsia RJ.

Curr HIV Res. 2007 Jul;5(4):430-9.

PMID:
17627506
[PubMed - indexed for MEDLINE]
19.

Tracing the origin and co-phylogeny of the caliciviruses.

Etherington GJ, Ring SM, Charleston MA, Dicks J, Rayward-Smith VJ, Roberts IN.

J Gen Virol. 2006 May;87(Pt 5):1229-35.

PMID:
16603525
[PubMed - indexed for MEDLINE]
Free Article
20.

Evolution. Is the "Big Bang" in animal evolution real?

Jermiin LS, Poladian L, Charleston MA.

Science. 2005 Dec 23;310(5756):1910-1. No abstract available.

PMID:
16373562
[PubMed - indexed for MEDLINE]

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