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Results: 1 to 20 of 29

1.

The draft genome sequence of European pear (Pyrus communis L. 'Bartlett').

Chagné D, Crowhurst RN, Pindo M, Thrimawithana A, Deng C, Ireland H, Fiers M, Dzierzon H, Cestaro A, Fontana P, Bianco L, Lu A, Storey R, Knäbel M, Saeed M, Montanari S, Kim YK, Nicolini D, Larger S, Stefani E, Allan AC, Bowen J, Harvey I, Johnston J, Malnoy M, Troggio M, Perchepied L, Sawyer G, Wiedow C, Won K, Viola R, Hellens RP, Brewer L, Bus VG, Schaffer RJ, Gardiner SE, Velasco R.

PLoS One. 2014 Apr 3;9(4):e92644. doi: 10.1371/journal.pone.0092644. eCollection 2014.

PMID:
24699266
[PubMed - in process]
Free PMC Article
2.

The AAT1 locus is critical for the biosynthesis of esters contributing to 'ripe apple' flavour in 'Royal Gala' and 'Granny Smith' apples.

Souleyre EJ, Chagné D, Chen X, Tomes S, Turner RM, Wang MY, Maddumage R, Hunt MB, Winz RA, Wiedow C, Hamiaux C, Gardiner SE, Rowan DD, Atkinson RG.

Plant J. 2014 Jun;78(6):903-15. doi: 10.1111/tpj.12518. Epub 2014 May 23.

PMID:
24661745
[PubMed - in process]
3.

Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids.

Montanari S, Saeed M, Knäbel M, Kim Y, Troggio M, Malnoy M, Velasco R, Fontana P, Won K, Durel CE, Perchepied L, Schaffer R, Wiedow C, Bus V, Brewer L, Gardiner SE, Crowhurst RN, Chagné D.

PLoS One. 2013 Oct 14;8(10):e77022. doi: 10.1371/journal.pone.0077022. eCollection 2013.

PMID:
24155917
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Novel genomic approaches unravel genetic architecture of complex traits in apple.

Kumar S, Garrick DJ, Bink MC, Whitworth C, Chagné D, Volz RK.

BMC Genomics. 2013 Jun 12;14:393. doi: 10.1186/1471-2164-14-393.

PMID:
23758946
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

QTL involved in the modification of cyanidin compounds in black and red raspberry fruit.

Bushakra JM, Krieger C, Deng D, Stephens MJ, Allan AC, Storey R, Symonds VV, Stevenson D, McGhie T, Chagné D, Buck EJ, Gardiner SE.

Theor Appl Genet. 2013 Mar;126(3):847-65. doi: 10.1007/s00122-012-2022-4. Epub 2012 Dec 9.

PMID:
23224381
[PubMed - indexed for MEDLINE]
6.

An ancient duplication of apple MYB transcription factors is responsible for novel red fruit-flesh phenotypes.

Chagné D, Lin-Wang K, Espley RV, Volz RK, How NM, Rouse S, Brendolise C, Carlisle CM, Kumar S, De Silva N, Micheletti D, McGhie T, Crowhurst RN, Storey RD, Velasco R, Hellens RP, Gardiner SE, Allan AC.

Plant Physiol. 2013 Jan;161(1):225-39. doi: 10.1104/pp.112.206771. Epub 2012 Oct 24.

PMID:
23096157
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Allelic variation in paralogs of GDP-L-galactose phosphorylase is a major determinant of vitamin C concentrations in apple fruit.

Mellidou I, Chagné D, Laing WA, Keulemans J, Davey MW.

Plant Physiol. 2012 Nov;160(3):1613-29. doi: 10.1104/pp.112.203786. Epub 2012 Sep 21.

PMID:
23001142
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genomic selection for fruit quality traits in apple (Malus×domestica Borkh.).

Kumar S, Chagné D, Bink MC, Volz RK, Whitworth C, Carlisle C.

PLoS One. 2012;7(5):e36674. doi: 10.1371/journal.pone.0036674. Epub 2012 May 4.

PMID:
22574211
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Construction of black (Rubus occidentalis) and red (R. idaeus) raspberry linkage maps and their comparison to the genomes of strawberry, apple, and peach.

Bushakra JM, Stephens MJ, Atmadjaja AN, Lewers KS, Symonds VV, Udall JA, Chagné D, Buck EJ, Gardiner SE.

Theor Appl Genet. 2012 Jul;125(2):311-27. doi: 10.1007/s00122-012-1835-5. Epub 2012 Mar 8.

PMID:
22398438
[PubMed - indexed for MEDLINE]
10.

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple.

Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, Van de Weg E, Gardiner SE, Bassil N, Peace C.

PLoS One. 2012;7(2):e31745. doi: 10.1371/journal.pone.0031745. Epub 2012 Feb 21.

PMID:
22363718
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

QTL and candidate gene mapping for polyphenolic composition in apple fruit.

Chagné D, Krieger C, Rassam M, Sullivan M, Fraser J, André C, Pindo M, Troggio M, Gardiner SE, Henry RA, Allan AC, McGhie TK, Laing WA.

BMC Plant Biol. 2012 Jan 23;12:12. doi: 10.1186/1471-2229-12-12.

PMID:
22269060
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A genomics approach to understanding the role of auxin in apple (Malus x domestica) fruit size control.

Devoghalaere F, Doucen T, Guitton B, Keeling J, Payne W, Ling TJ, Ross JJ, Hallett IC, Gunaseelan K, Dayatilake GA, Diak R, Breen KC, Tustin DS, Costes E, Chagné D, Schaffer RJ, David KM.

BMC Plant Biol. 2012 Jan 13;12:7. doi: 10.1186/1471-2229-12-7.

PMID:
22243694
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genetic control of biennial bearing in apple.

Guitton B, Kelner JJ, Velasco R, Gardiner SE, Chagné D, Costes E.

J Exp Bot. 2012 Jan;63(1):131-49. doi: 10.1093/jxb/err261. Epub 2011 Sep 30.

PMID:
21963613
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

An unusual plant triterpene synthase with predominant α-amyrin-producing activity identified by characterizing oxidosqualene cyclases from Malus × domestica.

Brendolise C, Yauk YK, Eberhard ED, Wang M, Chagne D, Andre C, Greenwood DR, Beuning LL.

FEBS J. 2011 Jul;278(14):2485-99. doi: 10.1111/j.1742-4658.2011.08175.x. Epub 2011 Jun 24.

PMID:
21575133
[PubMed - indexed for MEDLINE]
15.

High temperature reduces apple fruit colour via modulation of the anthocyanin regulatory complex.

Lin-Wang K, Micheletti D, Palmer J, Volz R, Lozano L, Espley R, Hellens RP, Chagnè D, Rowan DD, Troggio M, Iglesias I, Allan AC.

Plant Cell Environ. 2011 Jul;34(7):1176-90. doi: 10.1111/j.1365-3040.2011.02316.x. Epub 2011 Apr 21.

PMID:
21410713
[PubMed - indexed for MEDLINE]
16.

Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family.

Illa E, Sargent DJ, Lopez Girona E, Bushakra J, Cestaro A, Crowhurst R, Pindo M, Cabrera A, van der Knaap E, Iezzoni A, Gardiner S, Velasco R, Arús P, Chagné D, Troggio M.

BMC Evol Biol. 2011 Jan 12;11:9. doi: 10.1186/1471-2148-11-9.

PMID:
21226921
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The genome of the domesticated apple (Malus × domestica Borkh.).

Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, Fontana P, Bhatnagar SK, Troggio M, Pruss D, Salvi S, Pindo M, Baldi P, Castelletti S, Cavaiuolo M, Coppola G, Costa F, Cova V, Dal Ri A, Goremykin V, Komjanc M, Longhi S, Magnago P, Malacarne G, Malnoy M, Micheletti D, Moretto M, Perazzolli M, Si-Ammour A, Vezzulli S, Zini E, Eldredge G, Fitzgerald LM, Gutin N, Lanchbury J, Macalma T, Mitchell JT, Reid J, Wardell B, Kodira C, Chen Z, Desany B, Niazi F, Palmer M, Koepke T, Jiwan D, Schaeffer S, Krishnan V, Wu C, Chu VT, King ST, Vick J, Tao Q, Mraz A, Stormo A, Stormo K, Bogden R, Ederle D, Stella A, Vecchietti A, Kater MM, Masiero S, Lasserre P, Lespinasse Y, Allan AC, Bus V, Chagné D, Crowhurst RN, Gleave AP, Lavezzo E, Fawcett JA, Proost S, Rouzé P, Sterck L, Toppo S, Lazzari B, Hellens RP, Durel CE, Gutin A, Bumgarner RE, Gardiner SE, Skolnick M, Egholm M, Van de Peer Y, Salamini F, Viola R.

Nat Genet. 2010 Oct;42(10):833-9. doi: 10.1038/ng.654. Epub 2010 Aug 29.

PMID:
20802477
[PubMed - indexed for MEDLINE]
18.

Update on comparative genome mapping between Malus and Pyrus.

Celton JM, Chagné D, Tustin SD, Terakami S, Nishitani C, Yamamoto T, Gardiner SE.

BMC Res Notes. 2009 Sep 14;2:182. doi: 10.1186/1756-0500-2-182.

PMID:
19747407
[PubMed]
Free PMC Article
19.

Profiling fruit volatiles in the progeny of a 'Royal Gala' x 'Granny Smith' apple (Malus x domestica) cross.

Rowan DD, Hunt MB, Dimouro A, Alspach PA, Weskett R, Volz RK, Gardiner SE, Chagné D.

J Agric Food Chem. 2009 Sep 9;57(17):7953-61. doi: 10.1021/jf901678v.

PMID:
19691320
[PubMed - indexed for MEDLINE]
20.

Multiple repeats of a promoter segment causes transcription factor autoregulation in red apples.

Espley RV, Brendolise C, Chagné D, Kutty-Amma S, Green S, Volz R, Putterill J, Schouten HJ, Gardiner SE, Hellens RP, Allan AC.

Plant Cell. 2009 Jan;21(1):168-83. doi: 10.1105/tpc.108.059329. Epub 2009 Jan 16.

PMID:
19151225
[PubMed - indexed for MEDLINE]
Free PMC Article

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