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Results: 1 to 20 of 32

1.

The draft genome sequence of European pear (Pyrus communis L. 'Bartlett').

Chagné D, Crowhurst RN, Pindo M, Thrimawithana A, Deng C, Ireland H, Fiers M, Dzierzon H, Cestaro A, Fontana P, Bianco L, Lu A, Storey R, Knäbel M, Saeed M, Montanari S, Kim YK, Nicolini D, Larger S, Stefani E, Allan AC, Bowen J, Harvey I, Johnston J, Malnoy M, Troggio M, Perchepied L, Sawyer G, Wiedow C, Won K, Viola R, Hellens RP, Brewer L, Bus VG, Schaffer RJ, Gardiner SE, Velasco R.

PLoS One. 2014 Apr 3;9(4):e92644. doi: 10.1371/journal.pone.0092644. eCollection 2014.

PMID:
24699266
[PubMed - in process]
Free PMC Article
2.

An evaluation of the PacBio RS platform for sequencing and de novo assembly of a chloroplast genome.

Ferrarini M, Moretto M, Ward JA, Šurbanovski N, Stevanović V, Giongo L, Viola R, Cavalieri D, Velasco R, Cestaro A, Sargent DJ.

BMC Genomics. 2013 Oct 1;14:670. doi: 10.1186/1471-2164-14-670.

PMID:
24083400
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin.

Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ.

PLoS One. 2013 Jun 27;8(6):e67407. Print 2013.

PMID:
23826289
[PubMed - as supplied by publisher]
Free PMC Article
4.

Linking genomics and ecology to investigate the complex evolution of an invasive Drosophila pest.

Ometto L, Cestaro A, Ramasamy S, Grassi A, Revadi S, Siozios S, Moretto M, Fontana P, Varotto C, Pisani D, Dekker T, Wrobel N, Viola R, Pertot I, Cavalieri D, Blaxter M, Anfora G, Rota-Stabelli O.

Genome Biol Evol. 2013;5(4):745-57. doi: 10.1093/gbe/evt034.

PMID:
23501831
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Draft Genome Sequence of the Wolbachia Endosymbiont of Drosophila suzukii.

Siozios S, Cestaro A, Kaur R, Pertot I, Rota-Stabelli O, Anfora G.

Genome Announc. 2013 Jan;1(1). pii: e00032-13. doi: 10.1128/genomeA.00032-13. Epub 2013 Feb 28.

PMID:
23472225
[PubMed - as supplied by publisher]
Free PMC Article
6.

Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies.

Jung S, Cestaro A, Troggio M, Main D, Zheng P, Cho I, Folta KM, Sosinski B, Abbott A, Celton JM, Arús P, Shulaev V, Verde I, Morgante M, Rokhsar D, Velasco R, Sargent DJ.

BMC Genomics. 2012 Apr 4;13:129. doi: 10.1186/1471-2164-13-129.

PMID:
22475018
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple.

Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, Van de Weg E, Gardiner SE, Bassil N, Peace C.

PLoS One. 2012;7(2):e31745. doi: 10.1371/journal.pone.0031745. Epub 2012 Feb 21.

PMID:
22363718
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genetic analysis of metabolites in apple fruits indicates an mQTL hotspot for phenolic compounds on linkage group 16.

Khan SA, Chibon PY, de Vos RC, Schipper BA, Walraven E, Beekwilder J, van Dijk T, Finkers R, Visser RG, van de Weg EW, Bovy A, Cestaro A, Velasco R, Jacobsen E, Schouten HJ.

J Exp Bot. 2012 May;63(8):2895-908. doi: 10.1093/jxb/err464. Epub 2012 Feb 13.

PMID:
22330898
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Deconstruction of the (paleo)polyploid grapevine genome based on the analysis of transposition events involving NBS resistance genes.

Malacarne G, Perazzolli M, Cestaro A, Sterck L, Fontana P, Van de Peer Y, Viola R, Velasco R, Salamini F.

PLoS One. 2012;7(1):e29762. doi: 10.1371/journal.pone.0029762. Epub 2012 Jan 11.

PMID:
22253773
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Resistance to Plasmopara viticola in a grapevine segregating population is associated with stilbenoid accumulation and with specific host transcriptional responses.

Malacarne G, Vrhovsek U, Zulini L, Cestaro A, Stefanini M, Mattivi F, Delledonne M, Velasco R, Moser C.

BMC Plant Biol. 2011 Aug 12;11:114. doi: 10.1186/1471-2229-11-114.

PMID:
21838877
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family.

Illa E, Sargent DJ, Lopez Girona E, Bushakra J, Cestaro A, Crowhurst R, Pindo M, Cabrera A, van der Knaap E, Iezzoni A, Gardiner S, Velasco R, Arús P, Chagné D, Troggio M.

BMC Evol Biol. 2011 Jan 12;11:9. doi: 10.1186/1471-2148-11-9.

PMID:
21226921
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The genome of the domesticated apple (Malus × domestica Borkh.).

Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, Fontana P, Bhatnagar SK, Troggio M, Pruss D, Salvi S, Pindo M, Baldi P, Castelletti S, Cavaiuolo M, Coppola G, Costa F, Cova V, Dal Ri A, Goremykin V, Komjanc M, Longhi S, Magnago P, Malacarne G, Malnoy M, Micheletti D, Moretto M, Perazzolli M, Si-Ammour A, Vezzulli S, Zini E, Eldredge G, Fitzgerald LM, Gutin N, Lanchbury J, Macalma T, Mitchell JT, Reid J, Wardell B, Kodira C, Chen Z, Desany B, Niazi F, Palmer M, Koepke T, Jiwan D, Schaeffer S, Krishnan V, Wu C, Chu VT, King ST, Vick J, Tao Q, Mraz A, Stormo A, Stormo K, Bogden R, Ederle D, Stella A, Vecchietti A, Kater MM, Masiero S, Lasserre P, Lespinasse Y, Allan AC, Bus V, Chagné D, Crowhurst RN, Gleave AP, Lavezzo E, Fawcett JA, Proost S, Rouzé P, Sterck L, Toppo S, Lazzari B, Hellens RP, Durel CE, Gutin A, Bumgarner RE, Gardiner SE, Skolnick M, Egholm M, Van de Peer Y, Salamini F, Viola R.

Nat Genet. 2010 Oct;42(10):833-9. doi: 10.1038/ng.654. Epub 2010 Aug 29.

PMID:
20802477
[PubMed - indexed for MEDLINE]
13.

Characterization of canine platelet adhesion to extracellular matrix proteins.

Pelagalli A, Pero ME, Mastellone V, Cestaro A, Signoriello S, Lombardi P, Avallone L.

Vet J. 2011 Jul;189(1):115-7. doi: 10.1016/j.tvjl.2010.06.017. Epub 2010 Jul 24.

PMID:
20659807
[PubMed - indexed for MEDLINE]
14.

Grapevine cell early activation of specific responses to DIMEB, a resveratrol elicitor.

Zamboni A, Gatto P, Cestaro A, Pilati S, Viola R, Mattivi F, Moser C, Velasco R.

BMC Genomics. 2009 Aug 6;10:363. doi: 10.1186/1471-2164-10-363.

PMID:
19660119
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Ontology-oriented retrieval of putative microRNAs in Vitis vinifera via GrapeMiRNA: a web database of de novo predicted grape microRNAs.

Lazzari B, Caprera A, Cestaro A, Merelli I, Del Corvo M, Fontana P, Milanesi L, Velasco R, Stella A.

BMC Plant Biol. 2009 Jun 29;9:82. doi: 10.1186/1471-2229-9-82.

PMID:
19563653
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Effects of therapy on haemostasis in dogs infected with Leishmania infantum, Ehrlichia canis, or both combined.

Cortese L, Pelagalli A, Piantedosi D, Cestaro A, Di Loria A, Lombardi P, Avallone L, Ciaramella P.

Vet Rec. 2009 Apr 4;164(14):433-4. No abstract available.

PMID:
19346544
[PubMed - indexed for MEDLINE]
17.

Rapid annotation of anonymous sequences from genome projects using semantic similarities and a weighting scheme in gene ontology.

Fontana P, Cestaro A, Velasco R, Formentin E, Toppo S.

PLoS One. 2009;4(2):e4619. doi: 10.1371/journal.pone.0004619. Epub 2009 Feb 27.

PMID:
19247487
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Sequencing and assembly of highly heterozygous genome of Vitis vinifera L. cv Pinot Noir: problems and solutions.

Zharkikh A, Troggio M, Pruss D, Cestaro A, Eldrdge G, Pindo M, Mitchell JT, Vezzulli S, Bhatnagar S, Fontana P, Viola R, Gutin A, Salamini F, Skolnick M, Velasco R.

J Biotechnol. 2008 Aug 31;136(1-2):38-43. doi: 10.1016/j.jbiotec.2008.04.013. Epub 2008 May 3.

PMID:
18538432
[PubMed - indexed for MEDLINE]
19.

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety.

Velasco R, Zharkikh A, Troggio M, Cartwright DA, Cestaro A, Pruss D, Pindo M, Fitzgerald LM, Vezzulli S, Reid J, Malacarne G, Iliev D, Coppola G, Wardell B, Micheletti D, Macalma T, Facci M, Mitchell JT, Perazzolli M, Eldredge G, Gatto P, Oyzerski R, Moretto M, Gutin N, Stefanini M, Chen Y, Segala C, Davenport C, Demattè L, Mraz A, Battilana J, Stormo K, Costa F, Tao Q, Si-Ammour A, Harkins T, Lackey A, Perbost C, Taillon B, Stella A, Solovyev V, Fawcett JA, Sterck L, Vandepoele K, Grando SM, Toppo S, Moser C, Lanchbury J, Bogden R, Skolnick M, Sgaramella V, Bhatnagar SK, Fontana P, Gutin A, Van de Peer Y, Salamini F, Viola R.

PLoS One. 2007 Dec 19;2(12):e1326.

PMID:
18094749
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genome-wide transcriptional analysis of grapevine berry ripening reveals a set of genes similarly modulated during three seasons and the occurrence of an oxidative burst at vèraison.

Pilati S, Perazzolli M, Malossini A, Cestaro A, Demattè L, Fontana P, Dal Ri A, Viola R, Velasco R, Moser C.

BMC Genomics. 2007 Nov 22;8:428.

PMID:
18034875
[PubMed - indexed for MEDLINE]
Free PMC Article

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