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Results: 1 to 20 of 175

1.

3D hydrogel environment rejuvenates aged pericytes for skeletal muscle tissue engineering.

Fuoco C, Sangalli E, Vono R, Testa S, Sacchetti B, Latronico MV, Bernardini S, Madeddu P, Cesareni G, Seliktar D, Rizzi R, Bearzi C, Cannata SM, Spinetti G, Gargioli C.

Front Physiol. 2014 May 30;5:203. doi: 10.3389/fphys.2014.00203. eCollection 2014.

PMID:
24910618
[PubMed]
Free PMC Article
2.

KinomeXplorer: an integrated platform for kinome biology studies.

Horn H, Schoof EM, Kim J, Robin X, Miller ML, Diella F, Palma A, Cesareni G, Jensen LJ, Linding R.

Nat Methods. 2014 Jun;11(6):603-4. doi: 10.1038/nmeth.2968. No abstract available.

PMID:
24874572
[PubMed - in process]
3.

Combining affinity proteomics and network context to identify new phosphatase substrates and adapters in growth pathways.

Sacco F, Boldt K, Calderone A, Panni S, Paoluzi S, Castagnoli L, Ueffing M, Cesareni G.

Front Genet. 2014 May 7;5:115. doi: 10.3389/fgene.2014.00115. eCollection 2014.

PMID:
24847354
[PubMed]
Free PMC Article
4.

Specificity of ε and non-ε isoforms of arabidopsis 14-3-3 proteins towards the H+-ATPase and other targets.

Pallucca R, Visconti S, Camoni L, Cesareni G, Melino S, Panni S, Torreri P, Aducci P.

PLoS One. 2014 Mar 6;9(3):e90764. doi: 10.1371/journal.pone.0090764. eCollection 2014.

PMID:
24603559
[PubMed - in process]
Free PMC Article
5.

The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases.

Orchard S, Ammari M, Aranda B, Breuza L, Briganti L, Broackes-Carter F, Campbell NH, Chavali G, Chen C, del-Toro N, Duesbury M, Dumousseau M, Galeota E, Hinz U, Iannuccelli M, Jagannathan S, Jimenez R, Khadake J, Lagreid A, Licata L, Lovering RC, Meldal B, Melidoni AN, Milagros M, Peluso D, Perfetto L, Porras P, Raghunath A, Ricard-Blum S, Roechert B, Stutz A, Tognolli M, van Roey K, Cesareni G, Hermjakob H.

Nucleic Acids Res. 2014 Jan;42(Database issue):D358-63. doi: 10.1093/nar/gkt1115. Epub 2013 Nov 13.

PMID:
24234451
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

mentha: a resource for browsing integrated protein-interaction networks.

Calderone A, Castagnoli L, Cesareni G.

Nat Methods. 2013 Aug;10(8):690-1. doi: 10.1038/nmeth.2561. No abstract available.

PMID:
23900247
[PubMed - indexed for MEDLINE]
7.

The SH2 domain interaction landscape.

Tinti M, Kiemer L, Costa S, Miller ML, Sacco F, Olsen JV, Carducci M, Paoluzi S, Langone F, Workman CT, Blom N, Machida K, Thompson CM, Schutkowski M, Brunak S, Mann M, Mayer BJ, Castagnoli L, Cesareni G.

Cell Rep. 2013 Apr 25;3(4):1293-305. doi: 10.1016/j.celrep.2013.03.001. Epub 2013 Mar 28.

PMID:
23545499
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Exploring the diversity of SPRY/B30.2-mediated interactions.

Perfetto L, Gherardini PF, Davey NE, Diella F, Helmer-Citterich M, Cesareni G.

Trends Biochem Sci. 2013 Jan;38(1):38-46. doi: 10.1016/j.tibs.2012.10.001. Epub 2012 Nov 17. Review.

PMID:
23164942
[PubMed - indexed for MEDLINE]
9.

Mapping the human phosphatome on growth pathways.

Sacco F, Gherardini PF, Paoluzi S, Saez-Rodriguez J, Helmer-Citterich M, Ragnini-Wilson A, Castagnoli L, Cesareni G.

Mol Syst Biol. 2012;8:603. doi: 10.1038/msb.2012.36.

PMID:
22893001
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Reply to: Cisplatin-induced primordial follicle oocyte killing and loss of fertility are not prevented by imatinib.

Maiani E, Di Bartolomeo C, Klinger FG, Cannata SM, Bernardini S, Chateauvieux S, Mack F, Mattei M, De Felici M, Diederich M, Cesareni G, Gonfloni S.

Nat Med. 2012 Aug;18(8):1172-4. doi: 10.1038/nm.2852. No abstract available.

PMID:
22869180
[PubMed - indexed for MEDLINE]
11.

HuPho: the human phosphatase portal.

Liberti S, Sacco F, Calderone A, Perfetto L, Iannuccelli M, Panni S, Santonico E, Palma A, Nardozza AP, Castagnoli L, Cesareni G.

FEBS J. 2013 Jan;280(2):379-87. doi: 10.1111/j.1742-4658.2012.08712.x. Epub 2012 Aug 24.

PMID:
22804825
[PubMed - indexed for MEDLINE]
12.

Oxidative Stress, DNA Damage, and c-Abl Signaling: At the Crossroad in Neurodegenerative Diseases?

Gonfloni S, Maiani E, Di Bartolomeo C, Diederich M, Cesareni G.

Int J Cell Biol. 2012;2012:683097. doi: 10.1155/2012/683097. Epub 2012 Jun 18.

PMID:
22761618
[PubMed]
Free PMC Article
13.

Special issue - modular protein domains.

Sudol M, Cesareni G, Superti-Furga G, Just W.

FEBS Lett. 2012 Aug 14;586(17):2571. doi: 10.1016/j.febslet.2012.06.005. Epub 2012 Jun 17. No abstract available.

PMID:
22713655
[PubMed - indexed for MEDLINE]
Free Article
14.

Counteracting effects operating on Src homology 2 domain-containing protein-tyrosine phosphatase 2 (SHP2) function drive selection of the recurrent Y62D and Y63C substitutions in Noonan syndrome.

Martinelli S, Nardozza AP, Delle Vigne S, Sabetta G, Torreri P, Bocchinfuso G, Flex E, Venanzi S, Palleschi A, Gelb BD, Cesareni G, Stella L, Castagnoli L, Tartaglia M.

J Biol Chem. 2012 Aug 3;287(32):27066-77. doi: 10.1074/jbc.M112.350231. Epub 2012 Jun 18.

PMID:
22711529
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The human phosphatase interactome: An intricate family portrait.

Sacco F, Perfetto L, Castagnoli L, Cesareni G.

FEBS Lett. 2012 Aug 14;586(17):2732-9. doi: 10.1016/j.febslet.2012.05.008. Epub 2012 May 21. Review.

PMID:
22626554
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Protein interaction data curation: the International Molecular Exchange (IMEx) consortium.

Orchard S, Kerrien S, Abbani S, Aranda B, Bhate J, Bidwell S, Bridge A, Briganti L, Brinkman FS, Cesareni G, Chatr-aryamontri A, Chautard E, Chen C, Dumousseau M, Goll J, Hancock RE, Hannick LI, Jurisica I, Khadake J, Lynn DJ, Mahadevan U, Perfetto L, Raghunath A, Ricard-Blum S, Roechert B, Salwinski L, Stümpflen V, Tyers M, Uetz P, Xenarios I, Hermjakob H.

Nat Methods. 2012 Apr;9(4):345-50. doi: 10.1038/nmeth.1931. Erratum in: Nat Methods. 2012 Jun;9(6):626. Brinkman, Fiona [corrected to Brinkman, Fiona S L]; Hancock, Robert [corrected to Hancock, Robert E W].

PMID:
22453911
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Reactive oxygen species and epidermal growth factor are antagonistic cues controlling SHP-2 dimerization.

Nardozza AP, D'Orazio M, Trapannone R, Corallino S, Filomeni G, Tartaglia M, Battistoni A, Cesareni G, Castagnoli L.

Mol Cell Biol. 2012 May;32(10):1998-2009. doi: 10.1128/MCB.06674-11. Epub 2012 Mar 12.

PMID:
22411627
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

BioCreative III interactive task: an overview.

Arighi CN, Roberts PM, Agarwal S, Bhattacharya S, Cesareni G, Chatr-Aryamontri A, Clematide S, Gaudet P, Giglio MG, Harrow I, Huala E, Krallinger M, Leser U, Li D, Liu F, Lu Z, Maltais LJ, Okazaki N, Perfetto L, Rinaldi F, Sætre R, Salgado D, Srinivasan P, Thomas PE, Toldo L, Hirschman L, Wu CH.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S4. doi: 10.1186/1471-2105-12-S8-S4.

PMID:
22151968
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.

Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S3. doi: 10.1186/1471-2105-12-S8-S3.

PMID:
22151929
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases.

Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S8. doi: 10.1186/1471-2105-12-S8-S8.

PMID:
22151178
[PubMed - indexed for MEDLINE]
Free PMC Article

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