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Items: 1 to 20 of 31

1.

New resources for genetic studies in Populus nigra: genome wide SNP discovery and development of a 12k Infinium array.

Faivre-Rampant P, Zaina G, Jorge V, Giacomello S, Segura V, Scalabrin S, Guérin V, De Paoli E, Aluome C, Viger M, Cattonaro F, Payne A, PaulStephenRaj P, Le Paslier M, Berard A, Allwright MR, Villar M, Taylor G, Bastien C, Morgante M.

Mol Ecol Resour. 2016 Mar 1. doi: 10.1111/1755-0998.12513. [Epub ahead of print]

PMID:
26929265
2.

Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays.

Dell'Acqua M, Gatti DM, Pea G, Cattonaro F, Coppens F, Magris G, Hlaing AL, Aung HH, Nelissen H, Baute J, Frascaroli E, Churchill GA, Inzé D, Morgante M, Pè ME.

Genome Biol. 2015 Sep 11;16:167. doi: 10.1186/s13059-015-0716-z.

3.

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements.

Akpinar BA, Magni F, Yuce M, Lucas SJ, Šimková H, Šafář J, Vautrin S, Bergès H, Cattonaro F, Doležel J, Budak H.

BMC Genomics. 2015 Jun 13;16:453. doi: 10.1186/s12864-015-1641-y.

4.

A knowledge base for Vitis vinifera functional analysis.

Pulvirenti A, Giugno R, Distefano R, Pigola G, Mongiovi M, Giudice G, Vendramin V, Lombardo A, Cattonaro F, Ferro A.

BMC Syst Biol. 2015;9 Suppl 3:S5. doi: 10.1186/1752-0509-9-S3-S5. Epub 2015 Jun 1.

5.

High-throughput physical map anchoring via BAC-pool sequencing.

Cviková K, Cattonaro F, Alaux M, Stein N, Mayer KF, Doležel J, Bartoš J.

BMC Plant Biol. 2015 Apr 11;15:99. doi: 10.1186/s12870-015-0429-1.

6.

Genomic resources notes accepted 1 October 2014-30 November 2014.

Genomic Resources Development Consortium, Baratti M, Cattonaro F, Di Lorenzo T, Galassi DM, Iannilli V, Iannucci A, Jensen J, Larsen PF, Nielsen RO, Pertoldi C, Postolache D, Pujolar JM, Randi E, Ruiz-Gonzalez A, Thirstrup JP, Vendramin GG, Zalewski A.

Mol Ecol Resour. 2015 Mar;15(2):458-9. doi: 10.1111/1755-0998.12368.

PMID:
25677171
7.

LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome.

Barghini E, Natali L, Giordani T, Cossu RM, Scalabrin S, Cattonaro F, Šimková H, Vrána J, Doležel J, Morgante M, Cavallini A.

DNA Res. 2015 Feb;22(1):91-100. doi: 10.1093/dnares/dsu042. Epub 2014 Nov 26.

8.

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.

Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D.

Nat Biotechnol. 2014 Jul;32(7):656-62. doi: 10.1038/nbt.2906. Epub 2014 Jun 8.

9.

The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome.

Barghini E, Natali L, Cossu RM, Giordani T, Pindo M, Cattonaro F, Scalabrin S, Velasco R, Morgante M, Cavallini A.

Genome Biol Evol. 2014 Apr;6(4):776-91. doi: 10.1093/gbe/evu058.

10.

First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species, Pinus halepensis Mill.

Pinosio S, González-Martínez SC, Bagnoli F, Cattonaro F, Grivet D, Marroni F, Lorenzo Z, Pausas JG, Verdú M, Vendramin GG.

Mol Ecol Resour. 2014 Jul;14(4):846-56. doi: 10.1111/1755-0998.12232. Epub 2014 Mar 4.

PMID:
24450970
11.

The physical map of wheat chromosome 1BS provides insights into its gene space organization and evolution.

Raats D, Frenkel Z, Krugman T, Dodek I, Sela H, Simková H, Magni F, Cattonaro F, Vautrin S, Bergès H, Wicker T, Keller B, Leroy P, Philippe R, Paux E, Doležel J, Feuillet C, Korol A, Fahima T.

Genome Biol. 2013 Dec 20;14(12):R138. doi: 10.1186/gb-2013-14-12-r138.

12.

A physical map of the short arm of wheat chromosome 1A.

Breen J, Wicker T, Shatalina M, Frenkel Z, Bertin I, Philippe R, Spielmeyer W, Simková H, Safář J, Cattonaro F, Scalabrin S, Magni F, Vautrin S, Bergès H; International Wheat Genome Sequencing Consortium, Paux E, Fahima T, Doležel J, Korol A, Feuillet C, Keller B.

PLoS One. 2013 Nov 21;8(11):e80272. doi: 10.1371/journal.pone.0080272. eCollection 2013.

13.

Flow sorting and sequencing meadow fescue chromosome 4F.

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel J.

Plant Physiol. 2013 Nov;163(3):1323-37. doi: 10.1104/pp.113.224105. Epub 2013 Oct 4.

14.

A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat.

Philippe R, Paux E, Bertin I, Sourdille P, Choulet F, Laugier C, Simková H, Safář J, Bellec A, Vautrin S, Frenkel Z, Cattonaro F, Magni F, Scalabrin S, Martis MM, Mayer KF, Korol A, Bergès H, Doležel J, Feuillet C.

Genome Biol. 2013 Jun 25;14(6):R64. doi: 10.1186/gb-2013-14-6-r64.

15.

Physical mapping integrated with syntenic analysis to characterize the gene space of the long arm of wheat chromosome 1A.

Lucas SJ, Akpınar BA, Kantar M, Weinstein Z, Aydınoğlu F, Safář J, Simková H, Frenkel Z, Korol A, Magni F, Cattonaro F, Vautrin S, Bellec A, Bergès H, Doležel J, Budak H.

PLoS One. 2013 Apr 16;8(4):e59542. doi: 10.1371/journal.pone.0059542. Print 2013.

16.

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution.

International Peach Genome Initiative, Verde I, Abbott AG, Scalabrin S, Jung S, Shu S, Marroni F, Zhebentyayeva T, Dettori MT, Grimwood J, Cattonaro F, Zuccolo A, Rossini L, Jenkins J, Vendramin E, Meisel LA, Decroocq V, Sosinski B, Prochnik S, Mitros T, Policriti A, Cipriani G, Dondini L, Ficklin S, Goodstein DM, Xuan P, Del Fabbro C, Aramini V, Copetti D, Gonzalez S, Horner DS, Falchi R, Lucas S, Mica E, Maldonado J, Lazzari B, Bielenberg D, Pirona R, Miculan M, Barakat A, Testolin R, Stella A, Tartarini S, Tonutti P, Arús P, Orellana A, Wells C, Main D, Vizzotto G, Silva H, Salamini F, Schmutz J, Morgante M, Rokhsar DS.

Nat Genet. 2013 May;45(5):487-94. doi: 10.1038/ng.2586. Epub 2013 Mar 24.

PMID:
23525075
17.

Odorant-binding proteins and olfactory coding in the solitary bee Osmia cornuta.

Yin XW, Iovinella I, Marangoni R, Cattonaro F, Flamini G, Sagona S, Zhang L, Pelosi P, Felicioli A.

Cell Mol Life Sci. 2013 Aug;70(16):3029-39. doi: 10.1007/s00018-013-1308-2. Epub 2013 Mar 20.

PMID:
23512006
18.

Draft genome sequence of Lactobacillus rossiae DSM 15814(T).

Di Cagno R, De Angelis M, Cattonaro F, Gobbetti M.

J Bacteriol. 2012 Oct;194(19):5460-1. doi: 10.1128/JB.01248-12.

19.

Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat.

Bartoš J, Vlček C, Choulet F, Džunková M, Cviková K, Safář J, Simková H, Pačes J, Strnad H, Sourdille P, Bergès H, Cattonaro F, Feuillet C, Doležel J.

BMC Plant Biol. 2012 Aug 30;12:155.

20.

Synergistic parasite-pathogen interactions mediated by host immunity can drive the collapse of honeybee colonies.

Nazzi F, Brown SP, Annoscia D, Del Piccolo F, Di Prisco G, Varricchio P, Della Vedova G, Cattonaro F, Caprio E, Pennacchio F.

PLoS Pathog. 2012;8(6):e1002735. doi: 10.1371/journal.ppat.1002735. Epub 2012 Jun 14.

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