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Intrastrain genomic and phenotypic variability of the commercial Saccharomyces cerevisiae strain Zymaflore VL1 reveals microevolutionary adaptation to vineyard environments.

Franco-Duarte R, Bigey F, Carreto L, Mendes I, Dequin S, Santos MA, Pais C, Schuller D.

FEMS Yeast Res. 2015 Sep;15(6). pii: fov063. doi: 10.1093/femsyr/fov063. Epub 2015 Jul 17.


TRNA mutations that affect decoding fidelity deregulate development and the proteostasis network in zebrafish.

Reverendo M, Soares AR, Pereira PM, Carreto L, Ferreira V, Gatti E, Pierre P, Moura GR, Santos MA.

RNA Biol. 2014;11(9):1199-213. doi: 10.4161/rna.32199.


In vitro ischemia triggers a transcriptional response to down-regulate synaptic proteins in hippocampal neurons.

Fernandes J, Vieira M, Carreto L, Santos MA, Duarte CB, Carvalho AL, Santos AE.

PLoS One. 2014 Jun 24;9(6):e99958. doi: 10.1371/journal.pone.0099958. eCollection 2014.


Ischemic insults induce necroptotic cell death in hippocampal neurons through the up-regulation of endogenous RIP3.

Vieira M, Fernandes J, Carreto L, Anuncibay-Soto B, Santos M, Han J, Fernández-López A, Duarte CB, Carvalho AL, Santos AE.

Neurobiol Dis. 2014 Aug;68:26-36. doi: 10.1016/j.nbd.2014.04.002. Epub 2014 Apr 16.


High-throughput molecular profiling of a P-cadherin overexpressing breast cancer model reveals new targets for the anti-cancer bacterial protein azurin.

Bernardes N, Ribeiro AS, Abreu S, Vieira AF, Carreto L, Santos M, Seruca R, Paredes J, Fialho AM.

Int J Biochem Cell Biol. 2014 May;50:1-9. doi: 10.1016/j.biocel.2014.01.023. Epub 2014 Feb 6.


Participation of Candida albicans transcription factor RLM1 in cell wall biogenesis and virulence.

Delgado-Silva Y, Vaz C, Carvalho-Pereira J, Carneiro C, Nogueira E, Correia A, Carreto L, Silva S, Faustino A, Pais C, Oliveira R, Sampaio P.

PLoS One. 2014 Jan 23;9(1):e86270. doi: 10.1371/journal.pone.0086270. eCollection 2014.


Involvement of yeast HSP90 isoforms in response to stress and cell death induced by acetic acid.

Silva A, Sampaio-Marques B, Fernandes A, Carreto L, Rodrigues F, Holcik M, Santos MA, Ludovico P.

PLoS One. 2013 Aug 15;8(8):e71294. doi: 10.1371/journal.pone.0071294. eCollection 2013.


Analysis of the effects of sex hormone background on the rat choroid plexus transcriptome by cDNA microarrays.

Quintela T, Gonçalves I, Carreto LC, Santos MA, Marcelino H, Patriarca FM, Santos CR.

PLoS One. 2013 Apr 9;8(4):e60199. doi: 10.1371/journal.pone.0060199. Print 2013.


CDX2 regulation by the RNA-binding protein MEX3A: impact on intestinal differentiation and stemness.

Pereira B, Sousa S, Barros R, Carreto L, Oliveira P, Oliveira C, Chartier NT, Plateroti M, Rouault JP, Freund JN, Billaud M, Almeida R.

Nucleic Acids Res. 2013 Apr;41(7):3986-99. doi: 10.1093/nar/gkt087. Epub 2013 Feb 13.


P-cadherin functional role is dependent on E-cadherin cellular context: a proof of concept using the breast cancer model.

Ribeiro AS, Sousa B, Carreto L, Mendes N, Nobre AR, Ricardo S, Albergaria A, Cameselle-Teijeiro JF, Gerhard R, Söderberg O, Seruca R, Santos MA, Schmitt F, Paredes J.

J Pathol. 2013 Apr;229(5):705-18. doi: 10.1002/path.4143. Epub 2013 Jan 24.


Quercetin protects Saccharomyces cerevisiae against oxidative stress by inducing trehalose biosynthesis and the cell wall integrity pathway.

Vilaça R, Mendes V, Mendes MV, Carreto L, Amorim MA, de Freitas V, Moradas-Ferreira P, Mateus N, Costa V.

PLoS One. 2012;7(9):e45494. doi: 10.1371/journal.pone.0045494. Epub 2012 Sep 18.


Burkholderia pseudomallei transcriptional adaptation in macrophages.

Chieng S, Carreto L, Nathan S.

BMC Genomics. 2012 Jul 23;13:328. doi: 10.1186/1471-2164-13-328.


Low level genome mistranslations deregulate the transcriptome and translatome and generate proteotoxic stress in yeast.

Paredes JA, Carreto L, Simões J, Bezerra AR, Gomes AC, Santamaria R, Kapushesky M, Moura GR, Santos MA.

BMC Biol. 2012 Jun 20;10:55. doi: 10.1186/1741-7007-10-55.


The role of the Yap5 transcription factor in remodeling gene expression in response to Fe bioavailability.

Pimentel C, Vicente C, Menezes RA, Caetano S, Carreto L, Rodrigues-Pousada C.

PLoS One. 2012;7(5):e37434. doi: 10.1371/journal.pone.0037434. Epub 2012 May 16.


Species-specific codon context rules unveil non-neutrality effects of synonymous mutations.

Moura GR, Pinheiro M, Freitas A, Oliveira JL, Frommlet JC, Carreto L, Soares AR, Bezerra AR, Santos MA.

PLoS One. 2011;6(10):e26817. doi: 10.1371/journal.pone.0026817. Epub 2011 Oct 26.


Differential gene expression analysis in Enchytraeus albidus exposed to natural and chemical stressors at different exposure periods.

Novais SC, Howcroft CF, Carreto L, Pereira PM, Santos MA, De Coen W, Soares AM, Amorim MJ.

Ecotoxicology. 2012 Jan;21(1):213-24. doi: 10.1007/s10646-011-0780-4. Epub 2011 Sep 4.


The genetic code of the fungal CTG clade.

Santos MA, Gomes AC, Santos MC, Carreto LC, Moura GR.

C R Biol. 2011 Aug-Sep;334(8-9):607-11. doi: 10.1016/j.crvi.2011.05.008. Epub 2011 Jul 2. Review.


Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains.

Carreto L, Eiriz MF, Domingues I, Schuller D, Moura GR, Santos MA.

BMC Genomics. 2011 Apr 20;12:201. doi: 10.1186/1471-2164-12-201.


MicroRNA expression variability in human cervical tissues.

Pereira PM, Marques JP, Soares AR, Carreto L, Santos MA.

PLoS One. 2010 Jul 26;5(7):e11780. doi: 10.1371/journal.pone.0011780.


Genetic code ambiguity: an unexpected source of proteome innovation and phenotypic diversity.

Moura GR, Carreto LC, Santos MA.

Curr Opin Microbiol. 2009 Dec;12(6):631-7. doi: 10.1016/j.mib.2009.09.004. Epub 2009 Oct 21. Review.

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