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Results: 1 to 20 of 483

1.

Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions.

Grubert F, Zaugg JB, Kasowski M, Ursu O, Spacek DV, Martin AR, Greenside P, Srivas R, Phanstiel DH, Pekowska A, Heidari N, Euskirchen G, Huber W, Pritchard JK, Bustamante CD, Steinmetz LM, Kundaje A, Snyder M.

Cell. 2015 Aug 27;162(5):1051-65. doi: 10.1016/j.cell.2015.07.048. Epub 2015 Aug 20.

PMID:
26300125
2.

Achieving high-sensitivity for clinical applications using augmented exome sequencing.

Patwardhan A, Harris J, Leng N, Bartha G, Church DM, Luo S, Haudenschild C, Pratt M, Zook J, Salit M, Tirch J, Morra M, Chervitz S, Li M, Clark M, Garcia S, Chandratillake G, Kirk S, Ashley E, Snyder M, Altman R, Bustamante C, Butte AJ, West J, Chen R.

Genome Med. 2015 Jul 16;7(1):71. doi: 10.1186/s13073-015-0197-4. eCollection 2015.

3.

The phylogenetic position of the giant devil ray Mobula mobular (Bonnaterre, 1788) (Myliobatiformes, Myliobatidae) inferred from the mitochondrial genome.

Bustamante C, Barría C, Vargas-Caro C, Ovenden JR, Bennett MB.

Mitochondrial DNA. 2015 Aug 11:1-2. [Epub ahead of print]

PMID:
26260171
4.

Metabolic profiling of a range of peach fruit varieties reveals high metabolic diversity and commonalities and differences during ripening.

Monti LL, Bustamante CA, Osorio S, Gabilondo J, Borsani J, Lauxmann MA, Maulión E, Valentini G, Budde CO, Fernie AR, Lara MV, Drincovich MF.

Food Chem. 2016 Jan 1;190:879-88. doi: 10.1016/j.foodchem.2015.06.043. Epub 2015 Jun 16.

PMID:
26213052
5.

POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.

Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, Damgaard Pde B, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CP, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, Willerslev E.

Science. 2015 Aug 21;349(6250):aab3884. doi: 10.1126/science.aab3884. Epub 2015 Jul 21.

PMID:
26198033
6.

Cortical dynamics and subcortical signatures of motor-language coupling in Parkinson's disease.

Melloni M, Sedeño L, Hesse E, García-Cordero I, Mikulan E, Plastino A, Marcotti A, López JD, Bustamante C, Lopera F, Pineda D, García AM, Manes F, Trujillo N, Ibáñez A.

Sci Rep. 2015 Jul 8;5:11899. doi: 10.1038/srep11899.

7.

The phylogenetic position of the roughskin skate Dipturus trachyderma (Krefft & Stehmann, 1975) (Rajiformes, Rajidae) inferred from the mitochondrial genome.

Vargas-Caro C, Bustamante C, Lamilla J, Bennett MB, Ovenden JR.

Mitochondrial DNA. 2015 Jun 30:1-2. [Epub ahead of print]

PMID:
26122334
8.

Inexpensive and Highly Reproducible Cloud-Based Variant Calling of 2,535 Human Genomes.

Shringarpure SS, Carroll A, De La Vega FM, Bustamante CD.

PLoS One. 2015 Jun 25;10(6):e0129277. doi: 10.1371/journal.pone.0129277. eCollection 2015.

9.

The ancestry and affiliations of Kennewick Man.

Rasmussen M, Sikora M, Albrechtsen A, Korneliussen TS, Moreno-Mayar JV, Poznik GD, Zollikofer CP, Ponce de León MS, Allentoft ME, Moltke I, Jónsson H, Valdiosera C, Malhi RS, Orlando L, Bustamante CD, Stafford TW Jr, Meltzer DJ, Nielsen R, Willerslev E.

Nature. 2015 Jul 23;523(7561):455-8. doi: 10.1038/nature14625.

PMID:
26087396
10.

Beyond the reference genome.

Bustamante CD, Rasmussen M.

Nat Biotechnol. 2015 Jun;33(6):605-6. doi: 10.1038/nbt.3249. No abstract available.

PMID:
26057977
11.

ClinGen--the Clinical Genome Resource.

Rehm HL, Berg JS, Brooks LD, Bustamante CD, Evans JP, Landrum MJ, Ledbetter DH, Maglott DR, Martin CL, Nussbaum RL, Plon SE, Ramos EM, Sherry ST, Watson MS; ClinGen.

N Engl J Med. 2015 Jun 4;372(23):2235-42. doi: 10.1056/NEJMsr1406261. Epub 2015 May 27. No abstract available.

PMID:
26014595
12.

Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events.

Tilgner H, Jahanbani F, Blauwkamp T, Moshrefi A, Jaeger E, Chen F, Harel I, Bustamante CD, Rasmussen M, Snyder MP.

Nat Biotechnol. 2015 Jul;33(7):736-42. doi: 10.1038/nbt.3242. Epub 2015 May 18.

PMID:
25985263
13.

Estimating the mutation load in human genomes.

Henn BM, Botigué LR, Bustamante CD, Clark AG, Gravel S.

Nat Rev Genet. 2015 Jun;16(6):333-43. doi: 10.1038/nrg3931. Epub 2015 May 12. Review.

PMID:
25963372
14.

Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome.

Rivas MA, Pirinen M, Conrad DF, Lek M, Tsang EK, Karczewski KJ, Maller JB, Kukurba KR, DeLuca DS, Fromer M, Ferreira PG, Smith KS, Zhang R, Zhao F, Banks E, Poplin R, Ruderfer DM, Purcell SM, Tukiainen T, Minikel EV, Stenson PD, Cooper DN, Huang KH, Sullivan TJ, Nedzel J; GTEx Consortium; Geuvadis Consortium, Bustamante CD, Li JB, Daly MJ, Guigo R, Donnelly P, Ardlie K, Sammeth M, Dermitzakis ET, McCarthy MI, Montgomery SB, Lappalainen T, MacArthur DG.

Science. 2015 May 8;348(6235):666-9. doi: 10.1126/science.1261877.

PMID:
25954003
15.

Visualization and functional dissection of coaxial paired SpoIIIE channels across the sporulation septum.

Yen Shin J, Lopez-Garrido J, Lee SH, Diaz-Celis C, Fleming T, Bustamante C, Pogliano K.

Elife. 2015 May 7;4:e06474. doi: 10.7554/eLife.06474.

16.

New insights into the regulatory mechanisms of ppGpp and DksA on Escherichia coli RNA polymerase-promoter complex.

Doniselli N, Rodriguez-Aliaga P, Amidani D, Bardales JA, Bustamante C, Guerra DG, Rivetti C.

Nucleic Acids Res. 2015 May 26;43(10):5249-62. doi: 10.1093/nar/gkv391. Epub 2015 Apr 27.

17.

Ribosome. Mechanical force releases nascent chain-mediated ribosome arrest in vitro and in vivo.

Goldman DH, Kaiser CM, Milin A, Righini M, Tinoco I Jr, Bustamante C.

Science. 2015 Apr 24;348(6233):457-60. doi: 10.1126/science.1261909. Epub 2015 Apr 23.

PMID:
25908824
18.
19.

Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean.

Schroeder H, Ávila-Arcos MC, Malaspinas AS, Poznik GD, Sandoval-Velasco M, Carpenter ML, Moreno-Mayar JV, Sikora M, Johnson PL, Allentoft ME, Samaniego JA, Haviser JB, Dee MW, Stafford TW Jr, Salas A, Orlando L, Willerslev E, Bustamante CD, Gilbert MT.

Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3669-73. doi: 10.1073/pnas.1421784112. Epub 2015 Mar 9.

20.

Ribosome excursions during mRNA translocation mediate broad branching of frameshift pathways.

Yan S, Wen JD, Bustamante C, Tinoco I Jr.

Cell. 2015 Feb 26;160(5):870-81. doi: 10.1016/j.cell.2015.02.003. Epub 2015 Feb 19.

PMID:
25703095
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