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Items: 14

1.

Uridylation of RNA Hairpins by Tailor Confines the Emergence of MicroRNAs in Drosophila.

Reimão-Pinto MM, Ignatova V, Burkard TR, Hung JH, Manzenreither RA, Sowemimo I, Herzog VA, Reichholf B, Fariña-Lopez S, Ameres SL.

Mol Cell. 2015 Jul 16;59(2):203-16. doi: 10.1016/j.molcel.2015.05.033. Epub 2015 Jul 2.

2.

Ecdysone and mediator change energy metabolism to terminate proliferation in Drosophila neural stem cells.

Homem CC, Steinmann V, Burkard TR, Jais A, Esterbauer H, Knoblich JA.

Cell. 2014 Aug 14;158(4):874-88. doi: 10.1016/j.cell.2014.06.024.

3.

SWI/SNF complex prevents lineage reversion and induces temporal patterning in neural stem cells.

Eroglu E, Burkard TR, Jiang Y, Saini N, Homem CC, Reichert H, Knoblich JA.

Cell. 2014 Mar 13;156(6):1259-73. doi: 10.1016/j.cell.2014.01.053.

4.

A target-disease network model of second-generation BCR-ABL inhibitor action in Ph+ ALL.

Rix U, Colinge J, Blatt K, Gridling M, Remsing Rix LL, Parapatics K, Cerny-Reiterer S, Burkard TR, Jäger U, Melo JV, Bennett KL, Valent P, Superti-Furga G.

PLoS One. 2013 Oct 10;8(10):e77155. doi: 10.1371/journal.pone.0077155. eCollection 2013.

5.

Experimental characterization of the human non-sequence-specific nucleic acid interactome.

Dürnberger G, Bürckstümmer T, Huber K, Giambruno R, Doerks T, Karayel E, Burkard TR, Kaupe I, Müller AC, Schönegger A, Ecker GF, Lohninger H, Bork P, Bennett KL, Superti-Furga G, Colinge J.

Genome Biol. 2013 Jul 31;14(7):R81. doi: 10.1186/gb-2013-14-7-r81.

6.

FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal.

Berger C, Harzer H, Burkard TR, Steinmann J, van der Horst S, Laurenson AS, Novatchkova M, Reichert H, Knoblich JA.

Cell Rep. 2012 Aug 30;2(2):407-18. doi: 10.1016/j.celrep.2012.07.008. Epub 2012 Aug 9.

7.

Induction of immediate early genes in the mouse auditory cortex after auditory cued fear conditioning to complex sounds.

Peter M, Scheuch H, Burkard TR, Tinter J, Wernle T, Rumpel S.

Genes Brain Behav. 2012 Apr;11(3):314-24. doi: 10.1111/j.1601-183X.2011.00761.x. Epub 2012 Jan 19.

8.

IFIT1 is an antiviral protein that recognizes 5'-triphosphate RNA.

Pichlmair A, Lassnig C, Eberle CA, Górna MW, Baumann CL, Burkard TR, Bürckstümmer T, Stefanovic A, Krieger S, Bennett KL, Rülicke T, Weber F, Colinge J, Müller M, Superti-Furga G.

Nat Immunol. 2011 Jun 5;12(7):624-30. doi: 10.1038/ni.2048.

PMID:
21642987
9.

Initial characterization of the human central proteome.

Burkard TR, Planyavsky M, Kaupe I, Breitwieser FP, Bürckstümmer T, Bennett KL, Superti-Furga G, Colinge J.

BMC Syst Biol. 2011 Jan 26;5:17. doi: 10.1186/1752-0509-5-17.

10.

A computational approach to analyze the mechanism of action of the kinase inhibitor bafetinib.

Burkard TR, Rix U, Breitwieser FP, Superti-Furga G, Colinge J.

PLoS Comput Biol. 2010 Nov 18;6(11):e1001001. doi: 10.1371/journal.pcbi.1001001.

11.

The chemokine interleukin-8 and the surface activation protein CD69 are markers for Bcr-Abl activity in chronic myeloid leukemia.

Hantschel O, Gstoettenbauer A, Colinge J, Kaupe I, Bilban M, Burkard TR, Valent P, Superti-Furga G.

Mol Oncol. 2008 Oct;2(3):272-81. doi: 10.1016/j.molonc.2008.07.003. Epub 2008 Jul 23.

12.

Differential transcriptional modulation of biological processes in adipocyte triglyceride lipase and hormone-sensitive lipase-deficient mice.

Pinent M, Hackl H, Burkard TR, Prokesch A, Papak C, Scheideler M, Hämmerle G, Zechner R, Trajanoski Z, Strauss JG.

Genomics. 2008 Jul;92(1):26-32. doi: 10.1016/j.ygeno.2008.03.010.

13.

MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data.

Hartler J, Thallinger GG, Stocker G, Sturn A, Burkard TR, Körner E, Rader R, Schmidt A, Mechtler K, Trajanoski Z.

BMC Bioinformatics. 2007 Jun 13;8:197.

14.

Molecular processes during fat cell development revealed by gene expression profiling and functional annotation.

Hackl H, Burkard TR, Sturn A, Rubio R, Schleiffer A, Tian S, Quackenbush J, Eisenhaber F, Trajanoski Z.

Genome Biol. 2005;6(13):R108. Epub 2005 Dec 19.

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