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Results: 1 to 20 of 33

1.

Do genomic tests enhance autonomy?

Bunnik EM.

J Med Ethics. 2014 Jun 30. pii: medethics-2014-102171. doi: 10.1136/medethics-2014-102171. [Epub ahead of print] No abstract available.

PMID:
24980546
[PubMed - as supplied by publisher]
2.

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum.

Bunnik EM, Polishko A, Prudhomme J, Ponts N, Gill SS, Lonardi S, Le Roch KG.

BMC Genomics. 2014 May 8;15:347. doi: 10.1186/1471-2164-15-347.

PMID:
24885191
[PubMed - in process]
Free PMC Article
3.

Personal utility in genomic testing: is there such a thing?

Bunnik EM, Janssens AC, Schermer MH.

J Med Ethics. 2014 May 28. pii: medethics-2013-101887. doi: 10.1136/medethics-2013-101887. [Epub ahead of print]

PMID:
24872596
[PubMed - as supplied by publisher]
4.

Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression.

Ay F, Bunnik EM, Varoquaux N, Bol SM, Prudhomme J, Vert JP, Noble WS, Le Roch KG.

Genome Res. 2014 Jun;24(6):974-88. doi: 10.1101/gr.169417.113. Epub 2014 Mar 26.

PMID:
24671853
[PubMed - in process]
5.

An Introduction to Functional Genomics and Systems Biology.

Bunnik EM, Le Roch KG.

Adv Wound Care (New Rochelle). 2013 Nov;2(9):490-498.

PMID:
24527360
[PubMed]
Free PMC Article
6.

Naming and framing in genomic testing.

Bunnik EM, Schermer MH, Janssens AC.

Trends Mol Med. 2014 Feb;20(2):63-5. doi: 10.1016/j.molmed.2013.11.001.

PMID:
24485561
[PubMed - in process]
7.

Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum.

Ponts N, Fu L, Harris EY, Zhang J, Chung DW, Cervantes MC, Prudhomme J, Atanasova-Penichon V, Zehraoui E, Bunnik EM, Rodrigues EM, Lonardi S, Hicks GR, Wang Y, Le Roch KG.

Cell Host Microbe. 2013 Dec 11;14(6):696-706. doi: 10.1016/j.chom.2013.11.007.

PMID:
24331467
[PubMed - in process]
8.

The multifunctional autophagy pathway in the human malaria parasite, Plasmodium falciparum.

Cervantes S, Bunnik EM, Saraf A, Conner CM, Escalante A, Sardiu ME, Ponts N, Prudhomme J, Florens L, Le Roch KG.

Autophagy. 2014 Jan;10(1):80-92. doi: 10.4161/auto.26743. Epub 2013 Nov 11.

PMID:
24275162
[PubMed - in process]
Free PMC Article
9.

Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum.

Bunnik EM, Chung DW, Hamilton M, Ponts N, Saraf A, Prudhomme J, Florens L, Le Roch KG.

Genome Biol. 2013 Nov 22;14(11):R128. [Epub ahead of print]

PMID:
24267660
[PubMed - as supplied by publisher]
Free PMC Article
10.

The new genetics and informed consent: differentiating choice to preserve autonomy.

Bunnik EM, de Jong A, Nijsingh N, de Wert GM.

Bioethics. 2013 Jul;27(6):348-55. doi: 10.1111/bioe.12030. Epub 2013 May 30.

PMID:
23718722
[PubMed - in process]
11.

A tiered-layered-staged model for informed consent in personal genome testing.

Bunnik EM, Janssens AC, Schermer MH.

Eur J Hum Genet. 2013 Jun;21(6):596-601. doi: 10.1038/ejhg.2012.237. Epub 2012 Nov 21.

PMID:
23169494
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Informed Consent in Direct-to-Consumer Personal Genome Testing: The Outline of A Model between Specific and Generic Consent.

Bunnik EM, Janssens AC, Schermer MH.

Bioethics. 2012 Nov 8. doi: 10.1111/bioe.12004. [Epub ahead of print]

PMID:
23137034
[PubMed - as supplied by publisher]
13.

Reconstructing the dynamics of HIV evolution within hosts from serial deep sequence data.

Poon AF, Swenson LC, Bunnik EM, Edo-Matas D, Schuitemaker H, van 't Wout AB, Harrigan PR.

PLoS Comput Biol. 2012;8(11):e1002753. doi: 10.1371/journal.pcbi.1002753. Epub 2012 Nov 1.

PMID:
23133358
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The role of innate APOBEC3G and adaptive AID immune responses in HLA-HIV/SIV immunized SHIV infected macaques.

Wang Y, Whittall T, Rahman D, Bunnik EM, Vaughan R, Schøller J, Bergmeier LA, Montefiori D, Singh M, Schuitemaker H, Lehner T.

PLoS One. 2012;7(4):e34433. doi: 10.1371/journal.pone.0034433. Epub 2012 Apr 13.

PMID:
22514633
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Single nucleotide polymorphism in gene encoding transcription factor Prep1 is associated with HIV-1-associated dementia.

Bol SM, Booiman T, van Manen D, Bunnik EM, van Sighem AI, Sieberer M, Boeser-Nunnink B, de Wolf F, Schuitemaker H, Portegies P, Kootstra NA, van 't Wout AB.

PLoS One. 2012;7(2):e30990. doi: 10.1371/journal.pone.0030990. Epub 2012 Feb 7.

PMID:
22347417
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The role of disease characteristics in the ethical debate on personal genome testing.

Bunnik EM, Schermer MH, Janssens AC.

BMC Med Genomics. 2012 Jan 19;5:4. doi: 10.1186/1755-8794-5-4.

PMID:
22260407
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages.

Bol SM, Booiman T, Bunnik EM, Moerland PD, van Dort K, Strauss JF 3rd, Sieberer M, Schuitemaker H, Kootstra NA, van 't Wout AB.

Virology. 2011 Nov 10;420(1):32-42. doi: 10.1016/j.virol.2011.08.013. Epub 2011 Sep 13.

PMID:
21920574
[PubMed - indexed for MEDLINE]
Free Article
18.

Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing.

Bunnik EM, Swenson LC, Edo-Matas D, Huang W, Dong W, Frantzell A, Petropoulos CJ, Coakley E, Schuitemaker H, Harrigan PR, van 't Wout AB.

PLoS Pathog. 2011 Jun;7(6):e1002106. doi: 10.1371/journal.ppat.1002106. Epub 2011 Jun 23.

PMID:
21731496
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Personal genome testing: test characteristics to clarify the discourse on ethical, legal and societal issues.

Bunnik EM, Schermer MH, Janssens AC.

BMC Med Ethics. 2011 Jun 14;12:11. doi: 10.1186/1472-6939-12-11. Review.

PMID:
21672210
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Longer V1V2 region with increased number of potential N-linked glycosylation sites in the HIV-1 envelope glycoprotein protects against HIV-specific neutralizing antibodies.

van Gils MJ, Bunnik EM, Boeser-Nunnink BD, Burger JA, Terlouw-Klein M, Verwer N, Schuitemaker H.

J Virol. 2011 Jul;85(14):6986-95. doi: 10.1128/JVI.00268-11. Epub 2011 May 18.

PMID:
21593147
[PubMed - indexed for MEDLINE]
Free PMC Article

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