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Results: 1 to 20 of 22

1.

SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.

Gonçalves da Silva A, Barendse W, Kijas JW, Barris WC, McWilliam S, Bunch RJ, McCullough R, Harrison B, Hoelzel AR, England PR.

Mol Ecol Resour. 2014 Nov 10. doi: 10.1111/1755-0998.12343. [Epub ahead of print]

PMID:
25388640
[PubMed - as supplied by publisher]
2.

Evidence for positive selection of taurine genes within a QTL region on chromosome X associated with testicular size in Australian Brahman cattle.

Lyons RE, Loan NT, Dierens L, Fortes MR, Kelly M, McWilliam SS, Li Y, Bunch RJ, Harrison BE, Barendse W, Lehnert SA, Moore SS.

BMC Genet. 2014 Jan 10;15:6. doi: 10.1186/1471-2156-15-6.

PMID:
24410912
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle.

Bolormaa S, Pryce JE, Kemper K, Savin K, Hayes BJ, Barendse W, Zhang Y, Reich CM, Mason BA, Bunch RJ, Harrison BE, Reverter A, Herd RM, Tier B, Graser HU, Goddard ME.

J Anim Sci. 2013 Jul;91(7):3088-104. doi: 10.2527/jas.2012-5827. Epub 2013 May 8.

PMID:
23658330
[PubMed - indexed for MEDLINE]
Free Article
4.

Variation in the XKR4 gene was significantly associated with subcutaneous rump fat thickness in indicine and composite cattle.

Porto Neto LR, Bunch RJ, Harrison BE, Barendse W.

Anim Genet. 2012 Dec;43(6):785-9. doi: 10.1111/j.1365-2052.2012.02330.x. Epub 2012 Feb 27.

PMID:
22497494
[PubMed - indexed for MEDLINE]
5.

The RIPK2 gene: a positional candidate for tick burden supported by genetic associations in cattle and immunological response of knockout mouse.

Porto Neto LR, Jonsson NN, Ingham A, Bunch RJ, Harrison BE, Barendse W; Cooperative Research Centre for Beef Genetic Technologies.

Immunogenetics. 2012 May;64(5):379-88. doi: 10.1007/s00251-012-0601-9.

PMID:
22314416
[PubMed - indexed for MEDLINE]
6.

A genome-wide association study of meat and carcass traits in Australian cattle.

Bolormaa S, Neto LR, Zhang YD, Bunch RJ, Harrison BE, Goddard ME, Barendse W.

J Anim Sci. 2011 Aug;89(8):2297-309. doi: 10.2527/jas.2010-3138. Epub 2011 Mar 18.

PMID:
21421834
[PubMed - indexed for MEDLINE]
Free Article
7.

DNA variation in the gene ELTD1 is associated with tick burden in cattle.

Porto Neto LR, Bunch RJ, Harrison BE, Barendse W.

Anim Genet. 2011 Feb;42(1):50-5. doi: 10.1111/j.1365-2052.2010.02120.x. Epub 2010 Sep 30.

PMID:
20880337
[PubMed - indexed for MEDLINE]
8.

Haplotypes that include the integrin alpha 11 gene are associated with tick burden in cattle.

Porto Neto LR, Bunch RJ, Harrison BE, Prayaga KC, Barendse W.

BMC Genet. 2010 Jun 21;11:55. doi: 10.1186/1471-2156-11-55.

PMID:
20565915
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The effect of variation at the retinoic acid receptor-related orphan receptor C gene on intramuscular fat percent and marbling score in Australian cattle.

Barendse W, Bunch RJ, Harrison BE.

J Anim Sci. 2010 Jan;88(1):47-51. doi: 10.2527/jas.2009-2178. Epub 2009 Oct 9.

PMID:
19820062
[PubMed - indexed for MEDLINE]
Free Article
10.

A splice site single nucleotide polymorphism of the fatty acid binding protein 4 gene appears to be associated with intramuscular fat deposition in longissimus muscle in Australian cattle.

Barendse W, Bunch RJ, Thomas MB, Harrison BE.

Anim Genet. 2009 Oct;40(5):770-3. doi: 10.1111/j.1365-2052.2009.01913.x. Epub 2009 May 16.

PMID:
19466936
[PubMed - indexed for MEDLINE]
11.

Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits.

Barendse W, Harrison BE, Bunch RJ, Thomas MB, Turner LB.

BMC Genomics. 2009 Apr 24;10:178. doi: 10.1186/1471-2164-10-178.

PMID:
19393047
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Bovine HapMap Consortium, Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG.

Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936.

PMID:
19390050
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle.

Barendse W, Harrison BE, Bunch RJ, Thomas MB.

BMC Genet. 2008 Jul 1;9:41. doi: 10.1186/1471-2156-9-41.

PMID:
18590576
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Epistasis between calpain 1 and its inhibitor calpastatin within breeds of cattle.

Barendse W, Harrison BE, Hawken RJ, Ferguson DM, Thompson JM, Thomas MB, Bunch RJ.

Genetics. 2007 Aug;176(4):2601-10. Epub 2007 Jul 1.

PMID:
17603104
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A validated whole-genome association study of efficient food conversion in cattle.

Barendse W, Reverter A, Bunch RJ, Harrison BE, Barris W, Thomas MB.

Genetics. 2007 Jul;176(3):1893-905. Epub 2007 May 16.

PMID:
17507676
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The effect of genetic variation of the retinoic acid receptor-related orphan receptor C gene on fatness in cattle.

Barendse W, Bunch RJ, Kijas JW, Thomas MB.

Genetics. 2007 Feb;175(2):843-53. Epub 2006 Dec 6.

PMID:
17151246
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The growth hormone 1 GH1:c.457C>G mutation is associated with intramuscular and rump fat distribution in a large sample of Australian feedlot cattle.

Barendse W, Bunch RJ, Harrison BE, Thomas MB.

Anim Genet. 2006 Jun;37(3):211-4.

PMID:
16734678
[PubMed - indexed for MEDLINE]
18.

The leptin C73T missense mutation is not associated with marbling and fatness traits in a large gene mapping experiment in Australian cattle.

Barendse W, Bunch RJ, Harrison BE.

Anim Genet. 2005 Feb;36(1):86-8. No abstract available.

PMID:
15670140
[PubMed - indexed for MEDLINE]
19.

Repeated ruminal dosing of Ruminococcus spp. does not result in persistence, but changes in other microbial populations occur that can be measured with quantitative 16S-rRNA-based probes.

Krause DO, Bunch RJ, Conlan LL, Kennedy PM, Smith WJ, Mackie RI, McSweeney CS.

Microbiology. 2001 Jul;147(Pt 7):1719-29.

PMID:
11429450
[PubMed - indexed for MEDLINE]
Free Article
20.

Expression of a modified Neocallimastix patriciarum xylanase in Butyrivibrio fibrisolvens digests more fibre but cannot effectively compete with highly fibrolytic bacteria in the rumen.

Krause DO, Bunch RJ, Dalrymple BD, Gobius KS, Smith WJ, Xue GP, McSweeney CS.

J Appl Microbiol. 2001 Mar;90(3):388-96.

PMID:
11298234
[PubMed - indexed for MEDLINE]

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