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Results: 1 to 20 of 123

1.

Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes.

Salvo SA, Hirsch CN, Buell CR, Kaeppler SM, Kaeppler HF.

PLoS One. 2014 Oct 30;9(10):e111407. doi: 10.1371/journal.pone.0111407. eCollection 2014.

PMID:
25356773
[PubMed - in process]
Free PMC Article
2.

Treatment of potato tubers with the synthetic cytokinin 1-(α-ethylbenzyl)-3-nitroguanidine results in rapid termination of endodormancy and induction of transcripts associated with cell proliferation and growth.

Campbell M, Suttle J, Douches DS, Buell CR.

Funct Integr Genomics. 2014 Dec;14(4):789-99. doi: 10.1007/s10142-014-0404-1. Epub 2014 Oct 1.

PMID:
25270889
[PubMed - in process]
3.

A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels.

Owens BF, Lipka AE, Magallanes-Lundback M, Tiede T, Diepenbrock CH, Kandianis CB, Kim E, Cepela J, Mateos-Hernandez M, Buell CR, Buckler ES, DellaPenna D, Gore MA, Rocheford T.

Genetics. 2014 Dec;198(4):1699-716. doi: 10.1534/genetics.114.169979. Epub 2014 Sep 25.

PMID:
25258377
[PubMed - in process]
Free PMC Article
4.

QTL mapping and phenotypic variation for root architectural traits in maize (Zea mays L.).

Burton AL, Johnson JM, Foerster JM, Hirsch CN, Buell CR, Hanlon MT, Kaeppler SM, Brown KM, Lynch JP.

Theor Appl Genet. 2014 Nov;127(11):2293-311. doi: 10.1007/s00122-014-2353-4. Epub 2014 Sep 18.

PMID:
25230896
[PubMed - in process]
5.

A root-expressed L-phenylalanine:4-hydroxyphenylpyruvate aminotransferase is required for tropane alkaloid biosynthesis in Atropa belladonna.

Bedewitz MA, Góngora-Castillo E, Uebler JB, Gonzales-Vigil E, Wiegert-Rininger KE, Childs KL, Hamilton JP, Vaillancourt B, Yeo YS, Chappell J, DellaPenna D, Jones AD, Buell CR, Barry CS.

Plant Cell. 2014 Sep;26(9):3745-62. doi: 10.1105/tpc.114.130534. Epub 2014 Sep 16.

PMID:
25228340
[PubMed - in process]
6.

Comparative transcriptome atlases reveal altered gene expression modules between two Cleomaceae C3 and C4 plant species.

Külahoglu C, Denton AK, Sommer M, Maß J, Schliesky S, Wrobel TJ, Berckmans B, Gongora-Castillo E, Buell CR, Simon R, De Veylder L, Bräutigam A, Weber AP.

Plant Cell. 2014 Aug;26(8):3243-60. doi: 10.1105/tpc.114.123752. Epub 2014 Aug 8.

PMID:
25122153
[PubMed - in process]
Free Article
7.

Insights into the effects of long-term artificial selection on seed size in maize.

Hirsch CN, Flint-Garcia SA, Beissinger TM, Eichten SR, Deshpande S, Barry K, McMullen MD, Holland JB, Buckler ES, Springer N, Buell CR, de Leon N, Kaeppler SM.

Genetics. 2014 Sep;198(1):409-21. doi: 10.1534/genetics.114.167155. Epub 2014 Jul 17.

PMID:
25037958
[PubMed - in process]
8.

Timber! Felling the loblolly pine genome.

Hamilton JP, Buell CR.

Genome Biol. 2014 Mar 31;15(3):111. doi: 10.1186/gb4170.

PMID:
25000971
[PubMed - in process]
9.

Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grass Panicum virgatum.

Evans J, Kim J, Childs KL, Vaillancourt B, Crisovan E, Nandety A, Gerhardt DJ, Richmond TA, Jeddeloh JA, Kaeppler SM, Casler MD, Buell CR.

Plant J. 2014 Sep;79(6):993-1008. doi: 10.1111/tpj.12601. Epub 2014 Aug 11.

PMID:
24947485
[PubMed - in process]
Free Article
10.

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres.

Zhang H, Koblížková A, Wang K, Gong Z, Oliveira L, Torres GA, Wu Y, Zhang W, Novák P, Buell CR, Macas J, Jiang J.

Plant Cell. 2014 Apr 11;26(4):1436-1447. [Epub ahead of print]

PMID:
24728646
[PubMed - as supplied by publisher]
11.

Phenotypic and Transcriptional Analysis of Divergently Selected Maize Populations Reveals the Role of Developmental Timing in Seed Size Determination.

Sekhon RS, Hirsch CN, Childs KL, Breitzman MW, Kell P, Duvick S, Spalding EP, Buell CR, de Leon N, Kaeppler SM.

Plant Physiol. 2014 Apr 7;165(2):658-669. [Epub ahead of print]

PMID:
24710068
[PubMed - as supplied by publisher]
Free PMC Article
12.

Insights into the maize pan-genome and pan-transcriptome.

Hirsch CN, Foerster JM, Johnson JM, Sekhon RS, Muttoni G, Vaillancourt B, Peñagaricano F, Lindquist E, Pedraza MA, Barry K, de Leon N, Kaeppler SM, Buell CR.

Plant Cell. 2014 Jan;26(1):121-35. doi: 10.1105/tpc.113.119982. Epub 2014 Jan 31.

PMID:
24488960
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Reduced representation approaches to interrogate genome diversity in large repetitive plant genomes.

Hirsch CD, Evans J, Buell CR, Hirsch CN.

Brief Funct Genomics. 2014 Jul;13(4):257-67. doi: 10.1093/bfgp/elt051. Epub 2014 Jan 6.

PMID:
24395692
[PubMed - in process]
14.

A genome-wide scan for evidence of selection in a maize population under long-term artificial selection for ear number.

Beissinger TM, Hirsch CN, Vaillancourt B, Deshpande S, Barry K, Buell CR, Kaeppler SM, Gianola D, de Leon N.

Genetics. 2014 Mar;196(3):829-40. doi: 10.1534/genetics.113.160655. Epub 2013 Dec 30.

PMID:
24381334
[PubMed - indexed for MEDLINE]
15.

Carotenoid cleavage dioxygenase4 is a negative regulator of β-carotene content in Arabidopsis seeds.

Gonzalez-Jorge S, Ha SH, Magallanes-Lundback M, Gilliland LU, Zhou A, Lipka AE, Nguyen YN, Angelovici R, Lin H, Cepela J, Little H, Buell CR, Gore MA, Dellapenna D.

Plant Cell. 2013 Dec;25(12):4812-26. doi: 10.1105/tpc.113.119677. Epub 2013 Dec 24.

PMID:
24368792
[PubMed - in process]
Free PMC Article
16.

Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data.

Kawahara Y, de la Bastide M, Hamilton JP, Kanamori H, McCombie WR, Ouyang S, Schwartz DC, Tanaka T, Wu J, Zhou S, Childs KL, Davidson RM, Lin H, Quesada-Ocampo L, Vaillancourt B, Sakai H, Lee SS, Kim J, Numa H, Itoh T, Buell CR, Matsumoto T.

Rice (N Y). 2013 Feb 6;6(1):4. doi: 10.1186/1939-8433-6-4.

PMID:
24280374
[PubMed]
17.

Comparative genomics reveals insight into virulence strategies of plant pathogenic oomycetes.

Adhikari BN, Hamilton JP, Zerillo MM, Tisserat N, Lévesque CA, Buell CR.

PLoS One. 2013 Oct 4;8(10):e75072. doi: 10.1371/journal.pone.0075072. eCollection 2013.

PMID:
24124466
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Carbohydrate-active enzymes in pythium and their role in plant cell wall and storage polysaccharide degradation.

Zerillo MM, Adhikari BN, Hamilton JP, Buell CR, Lévesque CA, Tisserat N.

PLoS One. 2013 Sep 12;8(9):e72572. doi: 10.1371/journal.pone.0072572. eCollection 2013.

PMID:
24069150
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Genome-wide association study and pathway-level analysis of tocochromanol levels in maize grain.

Lipka AE, Gore MA, Magallanes-Lundback M, Mesberg A, Lin H, Tiede T, Chen C, Buell CR, Buckler ES, Rocheford T, DellaPenna D.

G3 (Bethesda). 2013 Aug 7;3(8):1287-99. doi: 10.1534/g3.113.006148.

PMID:
23733887
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays.

Sekhon RS, Briskine R, Hirsch CN, Myers CL, Springer NM, Buell CR, de Leon N, Kaeppler SM.

PLoS One. 2013 Apr 23;8(4):e61005. doi: 10.1371/journal.pone.0061005. Print 2013. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/0444d495-9231-4097-abe0-4750b9045971.

PMID:
23637782
[PubMed - indexed for MEDLINE]
Free PMC Article

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