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Results: 1 to 20 of 237

1.

Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments.

Lareau LF, Hite DH, Hogan GJ, Brown PO.

Elife. 2014 May 9;3:e01257. doi: 10.7554/eLife.01257.

PMID:
24842990
[PubMed - in process]
Free PMC Article
2.

Circular RNA is expressed across the eukaryotic tree of life.

Wang PL, Bao Y, Yee MC, Barrett SP, Hogan GJ, Olsen MN, Dinneny JR, Brown PO, Salzman J.

PLoS One. 2014 Mar 7;9(6):e90859. doi: 10.1371/journal.pone.0090859. eCollection 2014. Erratum in: PLoS One. 2014;9(4):e95116.

PMID:
24609083
[PubMed - in process]
Free PMC Article
3.

Cell-type specific features of circular RNA expression.

Salzman J, Chen RE, Olsen MN, Wang PL, Brown PO.

PLoS Genet. 2013;9(9):e1003777. doi: 10.1371/journal.pgen.1003777. Epub 2013 Sep 5.

PMID:
24039610
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Quantitative proteomic analysis reveals concurrent RNA-protein interactions and identifies new RNA-binding proteins in Saccharomyces cerevisiae.

Klass DM, Scheibe M, Butter F, Hogan GJ, Mann M, Brown PO.

Genome Res. 2013 Jun;23(6):1028-38. doi: 10.1101/gr.153031.112. Epub 2013 May 1.

PMID:
23636942
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

An interview with Patrick O Brown on the origins and future of open access.

Brown PO.

BMC Biol. 2013 Apr 15;11:33. doi: 10.1186/1741-7007-11-33. No abstract available.

PMID:
23587113
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Improved discovery of molecular interactions in genome-scale data with adaptive model-based normalization.

Salzman J, Klass DM, Brown PO.

PLoS One. 2013;8(1):e53930. doi: 10.1371/journal.pone.0053930. Epub 2013 Jan 22.

PMID:
23349766
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The yeast Rab GTPase Ypt1 modulates unfolded protein response dynamics by regulating the stability of HAC1 RNA.

Tsvetanova NG, Riordan DP, Brown PO.

PLoS Genet. 2012;8(7):e1002862. doi: 10.1371/journal.pgen.1002862. Epub 2012 Jul 26.

PMID:
22844259
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Extensive gene-specific translational reprogramming in a model of B cell differentiation and Abl-dependent transformation.

Bates JG, Salzman J, May D, Garcia PB, Hogan GJ, McIntosh M, Schlissel MS, Brown PO.

PLoS One. 2012;7(5):e37108. doi: 10.1371/journal.pone.0037108. Epub 2012 May 31.

PMID:
22693568
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Widespread mRNA association with cytoskeletal motor proteins and identification and dynamics of myosin-associated mRNAs in S. cerevisiae.

Casolari JM, Thompson MA, Salzman J, Champion LM, Moerner WE, Brown PO.

PLoS One. 2012;7(2):e31912. doi: 10.1371/journal.pone.0031912. Epub 2012 Feb 16.

PMID:
22359641
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.

Salzman J, Gawad C, Wang PL, Lacayo N, Brown PO.

PLoS One. 2012;7(2):e30733. doi: 10.1371/journal.pone.0030733. Epub 2012 Feb 1.

PMID:
22319583
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

ESRRA-C11orf20 is a recurrent gene fusion in serous ovarian carcinoma.

Salzman J, Marinelli RJ, Wang PL, Green AE, Nielsen JS, Nelson BH, Drescher CW, Brown PO.

PLoS Biol. 2011 Sep;9(9):e1001156. doi: 10.1371/journal.pbio.1001156. Epub 2011 Sep 20.

PMID:
21949640
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Defining the specificity of cotranslationally acting chaperones by systematic analysis of mRNAs associated with ribosome-nascent chain complexes.

del Alamo M, Hogan DJ, Pechmann S, Albanese V, Brown PO, Frydman J.

PLoS Biol. 2011 Jul;9(7):e1001100. doi: 10.1371/journal.pbio.1001100. Epub 2011 Jul 12.

PMID:
21765803
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Integration.

Brown PO.

In: Coffin JM, Hughes SH, Varmus HE, editors. Retroviruses. Cold Spring Harbor (NY): Cold Spring Harbor Laboratory Press; 1997.

PMID:
21433344
[PubMed]
Books & Documents
14.

Stunned silence: gene expression programs in human cells infected with monkeypox or vaccinia virus.

Rubins KH, Hensley LE, Relman DA, Brown PO.

PLoS One. 2011 Jan 18;6(1):e15615. doi: 10.1371/journal.pone.0015615.

PMID:
21267444
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identification of RNA recognition elements in the Saccharomyces cerevisiae transcriptome.

Riordan DP, Herschlag D, Brown PO.

Nucleic Acids Res. 2011 Mar;39(4):1501-9. doi: 10.1093/nar/gkq920. Epub 2010 Oct 18.

PMID:
20959291
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Three-dimensional tracking of single mRNA particles in Saccharomyces cerevisiae using a double-helix point spread function.

Thompson MA, Casolari JM, Badieirostami M, Brown PO, Moerner WE.

Proc Natl Acad Sci U S A. 2010 Oct 19;107(42):17864-71. doi: 10.1073/pnas.1012868107. Epub 2010 Oct 4.

PMID:
20921361
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Proteome-wide search reveals unexpected RNA-binding proteins in Saccharomyces cerevisiae.

Tsvetanova NG, Klass DM, Salzman J, Brown PO.

PLoS One. 2010 Sep 10;5(9). pii: e12671. doi: 10.1371/journal.pone.0012671.

PMID:
20844764
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Climate change and the integrity of science.

Gleick PH, Adams RM, Amasino RM, Anders E, Anderson DJ, Anderson WW, Anselin LE, Arroyo MK, Asfaw B, Ayala FJ, Bax A, Bebbington AJ, Bell G, Bennett MV, Bennetzen JL, Berenbaum MR, Berlin OB, Bjorkman PJ, Blackburn E, Blamont JE, Botchan MR, Boyer JS, Boyle EA, Branton D, Briggs SP, Briggs WR, Brill WJ, Britten RJ, Broecker WS, Brown JH, Brown PO, Brunger AT, Cairns J Jr, Canfield DE, Carpenter SR, Carrington JC, Cashmore AR, Castilla JC, Cazenave A, Chapin FS 3rd, Ciechanover AJ, Clapham DE, Clark WC, Clayton RN, Coe MD, Conwell EM, Cowling EB, Cowling RM, Cox CS, Croteau RB, Crothers DM, Crutzen PJ, Daily GC, Dalrymple GB, Dangl JL, Darst SA, Davies DR, Davis MB, De Camilli PV, Dean C, DeFries RS, Deisenhofer J, Delmer DP, DeLong EF, DeRosier DJ, Diener TO, Dirzo R, Dixon JE, Donoghue MJ, Doolittle RF, Dunne T, Ehrlich PR, Eisenstadt SN, Eisner T, Emanuel KA, Englander SW, Ernst WG, Falkowski PG, Feher G, Ferejohn JA, Fersht A, Fischer EH, Fischer R, Flannery KV, Frank J, Frey PA, Fridovich I, Frieden C, Futuyma DJ, Gardner WR, Garrett CJ, Gilbert W, Goldberg RB, Goodenough WH, Goodman CS, Goodman M, Greengard P, Hake S, Hammel G, Hanson S, Harrison SC, Hart SR, Hartl DL, Haselkorn R, Hawkes K, Hayes JM, Hille B, Hökfelt T, House JS, Hout M, Hunten DM, Izquierdo IA, Jagendorf AT, Janzen DH, Jeanloz R, Jencks CS, Jury WA, Kaback HR, Kailath T, Kay P, Kay SA, Kennedy D, Kerr A, Kessler RC, Khush GS, Kieffer SW, Kirch PV, Kirk K, Kivelson MG, Klinman JP, Klug A, Knopoff L, Kornberg H, Kutzbach JE, Lagarias JC, Lambeck K, Landy A, Langmuir CH, Larkins BA, Le Pichon XT, Lenski RE, Leopold EB, Levin SA, Levitt M, Likens GE, Lippincott-Schwartz J, Lorand L, Lovejoy CO, Lynch M, Mabogunje AL, Malone TF, Manabe S, Marcus J, Massey DS, McWilliams JC, Medina E, Melosh HJ, Meltzer DJ, Michener CD, Miles EL, Mooney HA, Moore PB, Morel FM, Mosley-Thompson ES, Moss B, Munk WH, Myers N, Nair GB, Nathans J, Nester EW, Nicoll RA, Novick RP, O'Connell JF, Olsen PE, Opdyke ND, Oster GF, Ostrom E, Pace NR, Paine RT, Palmiter RD, Pedlosky J, Petsko GA, Pettengill GH, Philander SG, Piperno DR, Pollard TD, Price PB Jr, Reichard PA, Reskin BF, Ricklefs RE, Rivest RL, Roberts JD, Romney AK, Rossmann MG, Russell DW, Rutter WJ, Sabloff JA, Sagdeev RZ, Sahlins MD, Salmond A, Sanes JR, Schekman R, Schellnhuber J, Schindler DW, Schmitt J, Schneider SH, Schramm VL, Sederoff RR, Shatz CJ, Sherman F, Sidman RL, Sieh K, Simons EL, Singer BH, Singer MF, Skyrms B, Sleep NH, Smith BD, Snyder SH, Sokal RR, Spencer CS, Steitz TA, Strier KB, Südhof TC, Taylor SS, Terborgh J, Thomas DH, Thompson LG, Tjian RT, Turner MG, Uyeda S, Valentine JW, Valentine JS, Van Etten JL, van Holde KE, Vaughan M, Verba S, von Hippel PH, Wake DB, Walker A, Walker JE, Watson EB, Watson PJ, Weigel D, Wessler SR, West-Eberhard MJ, White TD, Wilson WJ, Wolfenden RV, Wood JA, Woodwell GM, Wright HE Jr, Wu C, Wunsch C, Zoback ML.

Science. 2010 May 7;328(5979):689-90. doi: 10.1126/science.328.5979.689. No abstract available. Erratum in: Science. 2010 May 14;328(5980):826.

PMID:
20448167
[PubMed - indexed for MEDLINE]
19.

Dissecting interferon-induced transcriptional programs in human peripheral blood cells.

Waddell SJ, Popper SJ, Rubins KH, Griffiths MJ, Brown PO, Levin M, Relman DA.

PLoS One. 2010 Mar 22;5(3):e9753. doi: 10.1371/journal.pone.0009753.

PMID:
20339534
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

DNA methylation profiles of ovarian epithelial carcinoma tumors and cell lines.

Houshdaran S, Hawley S, Palmer C, Campan M, Olsen MN, Ventura AP, Knudsen BS, Drescher CW, Urban ND, Brown PO, Laird PW.

PLoS One. 2010 Feb 22;5(2):e9359. doi: 10.1371/journal.pone.0009359.

PMID:
20179752
[PubMed - indexed for MEDLINE]
Free PMC Article

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