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Items: 10


SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence.

Lopez-Maestre H, Brinza L, Marchet C, Kielbassa J, Bastien S, Boutigny M, Monnin D, Filali AE, Carareto CM, Vieira C, Picard F, Kremer N, Vavre F, Sagot MF, Lacroix V.

Nucleic Acids Res. 2016 Jul 25. pii: gkw655. [Epub ahead of print]


Overexpression of the transcription factor Sp1 activates the OAS-RNAse L-RIG-I pathway.

Dupuis-Maurin V, Brinza L, Baguet J, Plantamura E, Schicklin S, Chambion S, Macari C, Tomkowiak M, Deniaud E, Leverrier Y, Marvel J, Michallet MC.

PLoS One. 2015 Mar 4;10(3):e0118551. doi: 10.1371/journal.pone.0118551. eCollection 2015.


Combining µXANES and µXRD mapping to analyse the heterogeneity in calcium carbonate granules excreted by the earthworm Lumbricus terrestris.

Brinza L, Schofield PF, Hodson ME, Weller S, Ignatyev K, Geraki K, Quinn PD, Mosselmans JF.

J Synchrotron Radiat. 2014 Jan;21(Pt 1):235-41. doi: 10.1107/S160057751303083X. Epub 2013 Dec 12.


S1PR5 is pivotal for the homeostasis of patrolling monocytes.

Debien E, Mayol K, Biajoux V, Daussy C, De Aguero MG, Taillardet M, Dagany N, Brinza L, Henry T, Dubois B, Kaiserlian D, Marvel J, Balabanian K, Walzer T.

Eur J Immunol. 2013 Jun;43(6):1667-75. doi: 10.1002/eji.201343312. Epub 2013 Apr 30.


Genomic analysis of the regulatory elements and links with intrinsic DNA structural properties in the shrunken genome of Buchnera.

Brinza L, Calevro F, Charles H.

BMC Genomics. 2013 Feb 1;14:73. doi: 10.1186/1471-2164-14-73.


Negative regulation of NKG2D expression by IL-4 in memory CD8 T cells.

Ventre E, Brinza L, Schicklin S, Mafille J, Coupet CA, Marçais A, Djebali S, Jubin V, Walzer T, Marvel J.

J Immunol. 2012 Oct 1;189(7):3480-9. Epub 2012 Aug 31.


Structure and dynamics of the operon map of Buchnera aphidicola sp. strain APS.

Brinza L, Calevro F, Duport G, Gaget K, Gautier C, Charles H.

BMC Genomics. 2010 Nov 25;11:666. doi: 10.1186/1471-2164-11-666.


Systemic analysis of the symbiotic function of Buchnera aphidicola, the primary endosymbiont of the pea aphid Acyrthosiphon pisum.

Brinza L, Viñuelas J, Cottret L, Calevro F, Rahbé Y, Febvay G, Duport G, Colella S, Rabatel A, Gautier C, Fayard JM, Sagot MF, Charles H.

C R Biol. 2009 Nov;332(11):1034-49. doi: 10.1016/j.crvi.2009.09.007. Epub 2009 Oct 14. Review.


Overexpression of transcription factor Sp1 leads to gene expression perturbations and cell cycle inhibition.

Deniaud E, Baguet J, Chalard R, Blanquier B, Brinza L, Meunier J, Michallet MC, Laugraud A, Ah-Soon C, Wierinckx A, Castellazzi M, Lachuer J, Gautier C, Marvel J, Leverrier Y.

PLoS One. 2009 Sep 15;4(9):e7035. doi: 10.1371/journal.pone.0007035.


Cadmium tolerance and adsorption by the marine brown alga Fucus vesiculosus from the Irish Sea and the Bothnian Sea.

Brinza L, Nygård CA, Dring MJ, Gavrilescu M, Benning LG.

Bioresour Technol. 2009 Mar;100(5):1727-33. doi: 10.1016/j.biortech.2008.09.041. Epub 2008 Nov 6.

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