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Items: 1 to 20 of 83


Ontology-based image navigation: exploring 3.0-T MR neurography of the brachial plexus using AIM and RadLex.

Wang KC, Salunkhe AR, Morrison JJ, Lee PP, Mejino JL, Detwiler LT, Brinkley JF, Siegel EL, Rubin DL, Carrino JA.

Radiographics. 2015 Jan-Feb;35(1):142-51. doi: 10.1148/rg.351130072.


Evaluation and integration of disparate classification systems for clefts of the lip.

Wang KH, Heike CL, Clarkson MD, Mejino JL, Brinkley JF, Tse RW, Birgfeld CB, Fitzsimons DA, Cox TC.

Front Physiol. 2014 May 14;5:163. doi: 10.3389/fphys.2014.00163. eCollection 2014. Review.


Neuroanatomical domain of the foundational model of anatomy ontology.

Nichols BN, Mejino JL, Detwiler LT, Nilsen TT, Martone ME, Turner JA, Rubin DL, Brinkley JF.

J Biomed Semantics. 2014 Jan 8;5(1):1. doi: 10.1186/2041-1480-5-1.


Towards understanding craniofacial abnormalities: the ontology of craniofacial development and malformation.

Brinkley JF, Mejino JL, Detwiler LT, Travillian RS, Clarkson M, Cox T, Heike C, Cunningham M, Hochheiser H, Shapiro LG.

AMIA Jt Summits Transl Sci Proc. 2013 Mar 18;2013:20. eCollection 2013.


The ontology of craniofacial development and malformation for translational craniofacial research.

Brinkley JF, Borromeo C, Clarkson M, Cox TC, Cunningham MJ, Detwiler LT, Heike CL, Hochheiser H, Mejino JL, Travillian RS, Shapiro LG.

Am J Med Genet C Semin Med Genet. 2013 Nov;163C(4):232-45. doi: 10.1002/ajmg.c.31377. Epub 2013 Oct 4. Review.


Spatial-symbolic Query Engine in Anatomy.

Puget A, Mejino JL Jr, Detwiler LT, Franklin JD, Brinkley JF.

Methods Inf Med. 2012;51(6):463-78; discussion 479-88. doi: 10.3414/ME11-01-0047. Epub 2012 May 22.


A query integrator and manager for the query web.

Brinkley JF, Detwiler LT; Structural Informatics Group.

J Biomed Inform. 2012 Oct;45(5):975-91. doi: 10.1016/j.jbi.2012.03.008. Epub 2012 Apr 17.


Ontological labels for automated location of anatomical shape differences.

Steinert-Threlkeld S, Ardekani S, Mejino JL, Detwiler LT, Brinkley JF, Halle M, Kikinis R, Winslow RL, Miller MI, Ratnanather JT.

J Biomed Inform. 2012 Jun;45(3):522-7. doi: 10.1016/j.jbi.2012.02.013. Epub 2012 Apr 3.


A partnership approach for Electronic Data Capture in small-scale clinical trials.

Franklin JD, Guidry A, Brinkley JF.

J Biomed Inform. 2011 Dec;44 Suppl 1:S103-8. doi: 10.1016/j.jbi.2011.05.008. Epub 2011 May 30.


The FaceBase Consortium: a comprehensive program to facilitate craniofacial research.

Hochheiser H, Aronow BJ, Artinger K, Beaty TH, Brinkley JF, Chai Y, Clouthier D, Cunningham ML, Dixon M, Donahue LR, Fraser SE, Hallgrimsson B, Iwata J, Klein O, Marazita ML, Murray JC, Murray S, de Villena FP, Postlethwait J, Potter S, Shapiro L, Spritz R, Visel A, Weinberg SM, Trainor PA.

Dev Biol. 2011 Jul 15;355(2):175-82. doi: 10.1016/j.ydbio.2011.02.033. Epub 2011 Mar 31.


Application of neuroanatomical ontologies for neuroimaging data annotation.

Turner JA, Mejino JL, Brinkley JF, Detwiler LT, Lee HJ, Martone ME, Rubin DL.

Front Neuroinform. 2010 Jun 10;4. pii: 10. doi: 10.3389/fninf.2010.00010. eCollection 2010.


Analysis of naming errors during cortical stimulation mapping: implications for models of language representation.

Corina DP, Loudermilk BC, Detwiler L, Martin RF, Brinkley JF, Ojemann G.

Brain Lang. 2010 Nov;115(2):101-12. doi: 10.1016/j.bandl.2010.04.001. Epub 2010 May 8.


Content-specific auditing of a large scale anatomy ontology.

Kalet IJ, Mejino JL, Wang V, Whipple M, Brinkley JF.

J Biomed Inform. 2009 Jun;42(3):540-9. doi: 10.1016/j.jbi.2009.02.006. Epub 2009 Feb 25.


Distributed XQuery-Based Integration and Visualization of Multimodality Brain Mapping Data.

Detwiler LT, Suciu D, Franklin JD, Moore EB, Poliakov AV, Lee ES, Corina DP, Ojemann GA, Brinkley JF.

Front Neuroinform. 2009 Jan 30;3:2. doi: 10.3389/neuro.11.002.2009. eCollection 2009.


Generating application ontologies from reference ontologies.

Shaw M, Detwiler LT, Brinkley JF, Suciu D.

AMIA Annu Symp Proc. 2008 Nov 6:672-6.


Regular paths in SparQL: querying the NCI Thesaurus.

Detwiler LT, Suciu D, Brinkley JF.

AMIA Annu Symp Proc. 2008 Nov 6:161-5.


Concept mapping to develop a framework for characterizing Electronic Data Capture (EDC) Systems.

Guidry AF, Brinkley JF, Anderson NR, Tarczy-Hornoch P.

AMIA Annu Symp Proc. 2008 Nov 6:960.


Web service access to semantic web ontologies for data annotation.

Franklin JD, Mejino JL, Detwiler LT, Rubin DL, Brinkley JF.

AMIA Annu Symp Proc. 2008 Nov 6:946.


Challenges in reconciling different views of neuroanatomy in a reference ontology of anatomy.

Mejino JL, Martin RF, Detwiler LT, Brinkley JF.

AMIA Annu Symp Proc. 2007 Oct 11:1046.

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