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Results: 1 to 20 of 24

1.

Nucleosome sliding by Chd1 does not require rigid coupling between DNA-binding and ATPase domains.

Nodelman IM, Bowman GD.

EMBO Rep. 2013 Dec;14(12):1098-103. doi: 10.1038/embor.2013.158. Epub 2013 Oct 15.

PMID:
24126763
[PubMed - in process]
Free Article
2.

ATP-dependent chromatin assembly is functionally distinct from chromatin remodeling.

Torigoe SE, Patel A, Khuong MT, Bowman GD, Kadonaga JT.

Elife. 2013 Aug 20;2:e00863. doi: 10.7554/eLife.00863.

PMID:
23986862
[PubMed]
Free PMC Article
3.

Decoupling nucleosome recognition from DNA binding dramatically alters the properties of the Chd1 chromatin remodeler.

Patel A, Chakravarthy S, Morrone S, Nodelman IM, McKnight JN, Bowman GD.

Nucleic Acids Res. 2013 Feb 1;41(3):1637-48. doi: 10.1093/nar/gks1440. Epub 2012 Dec 28.

PMID:
23275572
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Enzymatic excision of uracil residues in nucleosomes depends on the local DNA structure and dynamics.

Ye Y, Stahley MR, Xu J, Friedman JI, Sun Y, McKnight JN, Gray JJ, Bowman GD, Stivers JT.

Biochemistry. 2012 Jul 31;51(30):6028-38. Epub 2012 Jul 23.

PMID:
22784353
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The basic linker of macroH2A stabilizes DNA at the entry/exit site of the nucleosome.

Chakravarthy S, Patel A, Bowman GD.

Nucleic Acids Res. 2012 Sep 1;40(17):8285-95. Epub 2012 Jun 29.

PMID:
22753032
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Identification of residues in chromodomain helicase DNA-binding protein 1 (Chd1) required for coupling ATP hydrolysis to nucleosome sliding.

Patel A, McKnight JN, Genzor P, Bowman GD.

J Biol Chem. 2011 Dec 23;286(51):43984-93. doi: 10.1074/jbc.M111.282970. Epub 2011 Oct 28.

PMID:
22039057
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Crystal structure of the chromodomain helicase DNA-binding protein 1 (Chd1) DNA-binding domain in complex with DNA.

Sharma A, Jenkins KR, Héroux A, Bowman GD.

J Biol Chem. 2011 Dec 9;286(49):42099-104. doi: 10.1074/jbc.C111.294462. Epub 2011 Oct 27.

PMID:
22033927
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Structural insights into regulation and action of SWI2/SNF2 ATPases.

Hauk G, Bowman GD.

Curr Opin Struct Biol. 2011 Dec;21(6):719-27. doi: 10.1016/j.sbi.2011.09.003. Epub 2011 Oct 11. Review.

PMID:
21996440
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Extranucleosomal DNA binding directs nucleosome sliding by Chd1.

McKnight JN, Jenkins KR, Nodelman IM, Escobar T, Bowman GD.

Mol Cell Biol. 2011 Dec;31(23):4746-59. doi: 10.1128/MCB.05735-11. Epub 2011 Oct 3.

PMID:
21969605
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Rapid DNA-protein cross-linking and strand scission by an abasic site in a nucleosome core particle.

Sczepanski JT, Wong RS, McKnight JN, Bowman GD, Greenberg MM.

Proc Natl Acad Sci U S A. 2010 Dec 28;107(52):22475-80. doi: 10.1073/pnas.1012860108. Epub 2010 Dec 13.

PMID:
21149689
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The chromodomains of the Chd1 chromatin remodeler regulate DNA access to the ATPase motor.

Hauk G, McKnight JN, Nodelman IM, Bowman GD.

Mol Cell. 2010 Sep 10;39(5):711-23. doi: 10.1016/j.molcel.2010.08.012.

PMID:
20832723
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Analysis of the role of PCNA-DNA contacts during clamp loading.

McNally R, Bowman GD, Goedken ER, O'Donnell M, Kuriyan J.

BMC Struct Biol. 2010 Jan 30;10:3. doi: 10.1186/1472-6807-10-3.

PMID:
20113510
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Mechanisms of ATP-dependent nucleosome sliding.

Bowman GD.

Curr Opin Struct Biol. 2010 Feb;20(1):73-81. doi: 10.1016/j.sbi.2009.12.002. Epub 2010 Jan 8. Review.

PMID:
20060707
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Magnetic tweezers measurement of single molecule torque.

Celedon A, Nodelman IM, Wildt B, Dewan R, Searson P, Wirtz D, Bowman GD, Sun SX.

Nano Lett. 2009 Apr;9(4):1720-5. doi: 10.1021/nl900631w.

PMID:
19301859
[PubMed - indexed for MEDLINE]
15.

The replication factor C clamp loader requires arginine finger sensors to drive DNA binding and proliferating cell nuclear antigen loading.

Johnson A, Yao NY, Bowman GD, Kuriyan J, O'Donnell M.

J Biol Chem. 2006 Nov 17;281(46):35531-43. Epub 2006 Sep 15.

PMID:
16980295
[PubMed - indexed for MEDLINE]
Free Article
16.

Mechanism of proliferating cell nuclear antigen clamp opening by replication factor C.

Yao NY, Johnson A, Bowman GD, Kuriyan J, O'Donnell M.

J Biol Chem. 2006 Jun 23;281(25):17528-39. Epub 2006 Apr 11.

PMID:
16608854
[PubMed - indexed for MEDLINE]
Free Article
17.

Out-of-plane motions in open sliding clamps: molecular dynamics simulations of eukaryotic and archaeal proliferating cell nuclear antigen.

Kazmirski SL, Zhao Y, Bowman GD, O'donnell M, Kuriyan J.

Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):13801-6. Epub 2005 Sep 16.

PMID:
16169903
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

DNA polymerase clamp loaders and DNA recognition.

Bowman GD, Goedken ER, Kazmirski SL, O'Donnell M, Kuriyan J.

FEBS Lett. 2005 Feb 7;579(4):863-7. Review.

PMID:
15680964
[PubMed - indexed for MEDLINE]
Free Article
19.

Mapping the interaction of DNA with the Escherichia coli DNA polymerase clamp loader complex.

Goedken ER, Kazmirski SL, Bowman GD, O'Donnell M, Kuriyan J.

Nat Struct Mol Biol. 2005 Feb;12(2):183-90. Epub 2005 Jan 16.

PMID:
15665871
[PubMed - indexed for MEDLINE]
20.

Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex.

Bowman GD, O'Donnell M, Kuriyan J.

Nature. 2004 Jun 17;429(6993):724-30.

PMID:
15201901
[PubMed - indexed for MEDLINE]

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