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Results: 1 to 20 of 192

1.

Ten simple rules for approaching a new job.

Bourne PE.

PLoS Comput Biol. 2014 Jun 26;10(6):e1003660. doi: 10.1371/journal.pcbi.1003660. eCollection 2014 Jun. No abstract available.

PMID:
24967974
[PubMed - in process]
Free PMC Article
2.

Towards structural systems pharmacology to study complex diseases and personalized medicine.

Xie L, Ge X, Tan H, Xie L, Zhang Y, Hart T, Yang X, Bourne PE.

PLoS Comput Biol. 2014 May 15;10(5):e1003554. doi: 10.1371/journal.pcbi.1003554. eCollection 2014 May.

PMID:
24830652
[PubMed - in process]
Free PMC Article
3.

Systematic detection of internal symmetry in proteins using CE-Symm.

Myers-Turnbull D, Bliven SE, Rose PW, Aziz ZK, Youkharibache P, Bourne PE, Prlić A.

J Mol Biol. 2014 May 29;426(11):2255-68. doi: 10.1016/j.jmb.2014.03.010. Epub 2014 Mar 26.

PMID:
24681267
[PubMed - indexed for MEDLINE]
Free Article
4.

What Big Data means to me.

Bourne PE.

J Am Med Inform Assoc. 2014 Mar-Apr;21(2):194. doi: 10.1136/amiajnl-2014-002651. No abstract available.

PMID:
24509599
[PubMed - indexed for MEDLINE]
5.

Combinatorial approach for large-scale identification of linked peptides from tandem mass spectrometry spectra.

Wang J, Anania VG, Knott J, Rush J, Lill JR, Bourne PE, Bandeira N.

Mol Cell Proteomics. 2014 Apr;13(4):1128-36. doi: 10.1074/mcp.M113.035758. Epub 2014 Feb 3.

PMID:
24493012
[PubMed - in process]
6.

A turn-key approach for large-scale identification of complex posttranslational modifications.

Wang J, Anania VG, Knott J, Rush J, Lill JR, Bourne PE, Bandeira N.

J Proteome Res. 2014 Mar 7;13(3):1190-9. doi: 10.1021/pr400368u. Epub 2014 Jan 29.

PMID:
24437954
[PubMed - in process]
7.

Quantifying reproducibility in computational biology: the case of the tuberculosis drugome.

Garijo D, Kinnings S, Xie L, Xie L, Zhang Y, Bourne PE, Gil Y.

PLoS One. 2013 Nov 27;8(11):e80278. doi: 10.1371/journal.pone.0080278. eCollection 2013.

PMID:
24312207
[PubMed - in process]
Free PMC Article
8.

Anti-infectious drug repurposing using an integrated chemical genomics and structural systems biology approach.

Ng C, Hauptman R, Zhang Y, Bourne PE, Xie L.

Pac Symp Biocomput. 2014:136-47.

PMID:
24297541
[PubMed - indexed for MEDLINE]
Free Article
9.

Learning how to run a lab: interviews with principal investigators.

Alexandrov T, Bourne PE.

PLoS Comput Biol. 2013;9(11):e1003349. doi: 10.1371/journal.pcbi.1003349. Epub 2013 Nov 7. No abstract available.

PMID:
24244147
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Antibacterial mechanisms identified through structural systems pharmacology.

Chang RL, Xie L, Bourne PE, Palsson BO.

BMC Syst Biol. 2013 Oct 10;7:102. doi: 10.1186/1752-0509-7-102.

PMID:
24112686
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Ten simple rules for cultivating open science and collaborative R&D.

Masum H, Rao A, Good BM, Todd MH, Edwards AM, Chan L, Bunin BA, Su AI, Thomas Z, Bourne PE.

PLoS Comput Biol. 2013;9(9):e1003244. doi: 10.1371/journal.pcbi.1003244. Epub 2013 Sep 26. No abstract available.

PMID:
24086123
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Multiscale modeling of the causal functional roles of nsSNPs in a genome-wide association study: application to hypoxia.

Xie L, Ng C, Ali T, Valencia R, Ferreira BL, Xue V, Tanweer M, Zhou D, Haddad GG, Bourne PE, Xie L.

BMC Genomics. 2013;14 Suppl 3:S9. doi: 10.1186/1471-2164-14-S3-S9. Epub 2013 May 28.

PMID:
23819581
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Biodiversity data should be published, cited, and peer reviewed.

Costello MJ, Michener WK, Gahegan M, Zhang ZQ, Bourne PE.

Trends Ecol Evol. 2013 Aug;28(8):454-61. doi: 10.1016/j.tree.2013.05.002. Epub 2013 Jun 5.

PMID:
23756105
[PubMed - indexed for MEDLINE]
14.

The RCSB Protein Data Bank: new resources for research and education.

Rose PW, Bi C, Bluhm WF, Christie CH, Dimitropoulos D, Dutta S, Green RK, Goodsell DS, Prlic A, Quesada M, Quinn GB, Ramos AG, Westbrook JD, Young J, Zardecki C, Berman HM, Bourne PE.

Nucleic Acids Res. 2013 Jan;41(Database issue):D475-82. doi: 10.1093/nar/gks1200. Epub 2012 Nov 27.

PMID:
23193259
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Communication of scientific information: is it time to reassess?

Rifai N, Sack J, Keller MA, Acharya A, Bourne PE, Rossner M, Wills S.

Clin Chem. 2013 Apr;59(4):604-11. doi: 10.1373/clinchem.2012.194738. Epub 2012 Nov 16. No abstract available.

PMID:
23160064
[PubMed - indexed for MEDLINE]
Free Article
16.

Ten simple rules to protect your intellectual property.

Jolly M, Fletcher AC, Bourne PE.

PLoS Comput Biol. 2012;8(11):e1002766. doi: 10.1371/journal.pcbi.1002766. Epub 2012 Nov 8. No abstract available.

PMID:
23144604
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Ten simple rules to commercialize scientific research.

Fletcher AC, Bourne PE.

PLoS Comput Biol. 2012;8(9):e1002712. doi: 10.1371/journal.pcbi.1002712. Epub 2012 Sep 27. No abstract available.

PMID:
23028299
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

BioJava: an open-source framework for bioinformatics in 2012.

Prlić A, Yates A, Bliven SE, Rose PW, Jacobsen J, Troshin PV, Chapman M, Gao J, Koh CH, Foisy S, Holland R, Rimsa G, Heuer ML, Brandstätter-Müller H, Bourne PE, Willis S.

Bioinformatics. 2012 Oct 15;28(20):2693-5. doi: 10.1093/bioinformatics/bts494. Epub 2012 Aug 9.

PMID:
22877863
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Raloxifene attenuates Pseudomonas aeruginosa pyocyanin production and virulence.

Ho Sui SJ, Lo R, Fernandes AR, Caulfield MD, Lerman JA, Xie L, Bourne PE, Baillie DL, Brinkman FS.

Int J Antimicrob Agents. 2012 Sep;40(3):246-51. doi: 10.1016/j.ijantimicag.2012.05.009. Epub 2012 Jul 20.

PMID:
22819149
[PubMed - indexed for MEDLINE]
Free Article
20.

Receptor databases and computational websites for ligand binding.

Rana BK, Bourne PE, Insel PA.

Methods Mol Biol. 2012;897:1-13. doi: 10.1007/978-1-61779-909-9_1.

PMID:
22674158
[PubMed - indexed for MEDLINE]

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