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Results: 1 to 20 of 60

1.

Genomic variation across landscapes: insights and applications.

Bragg JG, Supple MA, Andrew RL, Borevitz JO.

New Phytol. 2015 Apr 22. doi: 10.1111/nph.13410. [Epub ahead of print]

PMID:
25904408
2.

A chromatin modifying enzyme, SDG8, is involved in morphological, gene expression, and epigenetic responses to mechanical stimulation.

Cazzonelli CI, Nisar N, Roberts AC, Murray KD, Borevitz JO, Pogson BJ.

Front Plant Sci. 2014 Oct 21;5:533. doi: 10.3389/fpls.2014.00533. eCollection 2014.

3.

Gene flow between nascent species: geographic, genotypic and phenotypic differentiation within and between Aquilegia formosa and A. pubescens.

Noutsos C, Borevitz JO, Hodges SA.

Mol Ecol. 2014 Nov;23(22):5589-98. doi: 10.1111/mec.12962. Epub 2014 Nov 10.

PMID:
25314338
4.

Population genomic variation reveals roles of history, adaptation and ploidy in switchgrass.

Grabowski PP, Morris GP, Casler MD, Borevitz JO.

Mol Ecol. 2014 Aug;23(16):4059-73. doi: 10.1111/mec.12845. Epub 2014 Jul 21.

5.

TraitCapture: genomic and environment modelling of plant phenomic data.

Brown TB, Cheng R, Sirault XR, Rungrat T, Murray KD, Trtilek M, Furbank RT, Badger M, Pogson BJ, Borevitz JO.

Curr Opin Plant Biol. 2014 Apr;18:73-9. doi: 10.1016/j.pbi.2014.02.002. Epub 2014 Mar 16. Review.

6.

New Arabidopsis advanced intercross recombinant inbred lines reveal female control of nonrandom mating.

Fitz Gerald JN, Carlson AL, Smith E, Maloof JN, Weigel D, Chory J, Borevitz JO, Swanson RJ.

Plant Physiol. 2014 May;165(1):175-85. doi: 10.1104/pp.113.233213. Epub 2014 Mar 12.

7.

Genetic variation for life history sensitivity to seasonal warming in Arabidopsis thaliana.

Li Y, Cheng R, Spokas KA, Palmer AA, Borevitz JO.

Genetics. 2014 Feb;196(2):569-77. doi: 10.1534/genetics.113.157628. Epub 2013 Nov 26.

8.

C(m)CGG methylation-independent parent-of-origin effects on genome-wide transcript levels in isogenic reciprocal F1 triploid plants.

Donoghue MT, Fort A, Clifton R, Zhang X, McKeown PC, Voigt-Zielinksi ML, Borevitz JO, Spillane C.

DNA Res. 2014;21(2):141-51. doi: 10.1093/dnares/dst046. Epub 2013 Nov 7.

9.

Natural Genetic Variation for Growth and Development Revealed by High-Throughput Phenotyping in Arabidopsis thaliana.

Zhang X, Hause RJ Jr, Borevitz JO.

G3 (Bethesda). 2012 Jan;2(1):29-34. doi: 10.1534/g3.111.001487. Epub 2012 Jan 1.

10.

Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel.

Horton MW, Hancock AM, Huang YS, Toomajian C, Atwell S, Auton A, Muliyati NW, Platt A, Sperone FG, Vilhjálmsson BJ, Nordborg M, Borevitz JO, Bergelson J.

Nat Genet. 2012 Jan 8;44(2):212-6. doi: 10.1038/ng.1042.

11.

Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus.

He F, Zhang X, Hu JY, Turck F, Dong X, Goebel U, Borevitz JO, de Meaux J.

Mol Biol Evol. 2012 Mar;29(3):1081-91. doi: 10.1093/molbev/msr281. Epub 2011 Nov 15.

12.

Genomic diversity in switchgrass (Panicum virgatum): from the continental scale to a dune landscape.

Morris GP, Grabowski PP, Borevitz JO.

Mol Ecol. 2011 Dec;20(23):4938-52. doi: 10.1111/j.1365-294X.2011.05335.x. Epub 2011 Nov 8.

13.

Genome-wide association studies in plants: the missing heritability is in the field.

Brachi B, Morris GP, Borevitz JO.

Genome Biol. 2011 Oct 28;12(10):232. doi: 10.1186/gb-2011-12-10-232. Review.

14.

Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies.

Huang YS, Horton M, Vilhjálmsson BJ, Seren U, Meng D, Meyer C, Ali Amer M, Borevitz JO, Bergelson J, Nordborg M.

Database (Oxford). 2011 May 23;2011:bar014. doi: 10.1093/database/bar014. Print 2011.

15.

Source verification of mis-identified Arabidopsis thaliana accessions.

Anastasio AE, Platt A, Horton M, Grotewold E, Scholl R, Borevitz JO, Nordborg M, Bergelson J.

Plant J. 2011 Aug;67(3):554-66. doi: 10.1111/j.1365-313X.2011.04606.x. Epub 2011 Jun 16.

PMID:
21481029
16.

Genetic architecture of regulatory variation in Arabidopsis thaliana.

Zhang X, Cal AJ, Borevitz JO.

Genome Res. 2011 May;21(5):725-33. doi: 10.1101/gr.115337.110. Epub 2011 Apr 5.

17.

A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter AtHKT1;1.

Baxter I, Brazelton JN, Yu D, Huang YS, Lahner B, Yakubova E, Li Y, Bergelson J, Borevitz JO, Nordborg M, Vitek O, Salt DE.

PLoS Genet. 2010 Nov 11;6(11):e1001193. doi: 10.1371/journal.pgen.1001193.

18.

Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thaliana.

Li Y, Huang Y, Bergelson J, Nordborg M, Borevitz JO.

Proc Natl Acad Sci U S A. 2010 Dec 7;107(49):21199-204. doi: 10.1073/pnas.1007431107. Epub 2010 Nov 15.

19.

A methyl transferase links the circadian clock to the regulation of alternative splicing.

Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG, Brown JW, Cerdán PD, Borevitz JO, Mas P, Ceriani MF, Kornblihtt AR, Yanovsky MJ.

Nature. 2010 Nov 4;468(7320):112-6. doi: 10.1038/nature09470. Epub 2010 Oct 20.

PMID:
20962777
20.

Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana.

Todesco M, Balasubramanian S, Hu TT, Traw MB, Horton M, Epple P, Kuhns C, Sureshkumar S, Schwartz C, Lanz C, Laitinen RA, Huang Y, Chory J, Lipka V, Borevitz JO, Dangl JL, Bergelson J, Nordborg M, Weigel D.

Nature. 2010 Jun 3;465(7298):632-6. doi: 10.1038/nature09083.

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