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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1991 1
2005 2
2006 2
2007 1
2008 1
2009 1
2010 2
2011 2
2012 3
2013 2
2014 3
2015 3
2016 3
2017 1
2018 2
2019 3
2020 2
2021 5
2022 5
2023 2
2024 0

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40 results

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Page 1
Finding Maximal Exact Matches Using the r-Index.
Rossi M, Oliva M, Bonizzoni P, Langmead B, Gagie T, Boucher C. Rossi M, et al. Among authors: bonizzoni p. J Comput Biol. 2022 Feb;29(2):188-194. doi: 10.1089/cmb.2021.0445. Epub 2022 Jan 17. J Comput Biol. 2022. PMID: 35041518 Free PMC article.
Computational methods for alternative splicing prediction.
Bonizzoni P, Rizzi R, Pesole G. Bonizzoni P, et al. Brief Funct Genomic Proteomic. 2006 Mar;5(1):46-51. doi: 10.1093/bfgp/ell011. Epub 2006 Feb 20. Brief Funct Genomic Proteomic. 2006. PMID: 16769678 Review.
MALVIRUS: an integrated application for viral variant analysis.
Ciccolella S, Denti L, Bonizzoni P, Della Vedova G, Pirola Y, Previtali M. Ciccolella S, et al. Among authors: bonizzoni p. BMC Bioinformatics. 2022 Apr 19;22(Suppl 15):625. doi: 10.1186/s12859-022-04668-0. BMC Bioinformatics. 2022. PMID: 35439933 Free PMC article.
Shark: fishing relevant reads in an RNA-Seq sample.
Denti L, Pirola Y, Previtali M, Ceccato T, Della Vedova G, Rizzi R, Bonizzoni P. Denti L, et al. Among authors: bonizzoni p. Bioinformatics. 2021 May 1;37(4):464-472. doi: 10.1093/bioinformatics/btaa779. Bioinformatics. 2021. PMID: 32926128 Free PMC article.
Transcriptome assembly and alternative splicing analysis.
Bonizzoni P, Della Vedova G, Pesole G, Picardi E, Pirola Y, Rizzi R. Bonizzoni P, et al. Methods Mol Biol. 2015;1269:173-88. doi: 10.1007/978-1-4939-2291-8_11. Methods Mol Biol. 2015. PMID: 25577379
Effective Clustering for Single Cell Sequencing Cancer Data.
Ciccolella S, Patterson M, Bonizzoni P, Della Vedova G. Ciccolella S, et al. Among authors: bonizzoni p. IEEE J Biomed Health Inform. 2021 Nov;25(11):4068-4078. doi: 10.1109/JBHI.2021.3081380. Epub 2021 Nov 5. IEEE J Biomed Health Inform. 2021. PMID: 34003758
40 results