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Items: 1 to 20 of 27


Genomic Signature of Selective Sweeps Illuminates Adaptation of Medicago truncatula to Root-Associated Microorganisms.

Bonhomme M, Boitard S, San Clemente H, Dumas B, Young N, Jacquet C.

Mol Biol Evol. 2015 Aug;32(8):2097-110. doi: 10.1093/molbev/msv092. Epub 2015 Apr 21.


Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.

Roux PF, Boitard S, Blum Y, Parks B, Montagner A, Mouisel E, Djari A, Esquerré D, Désert C, Boutin M, Leroux S, Lecerf F, Le Bihan-Duval E, Klopp C, Servin B, Pitel F, Duclos MJ, Guillou H, Lusis AJ, Demeure O, Lagarrigue S.

G3 (Bethesda). 2015 Feb 3;5(4):517-29. doi: 10.1534/g3.115.016865.


Selection signatures in worldwide sheep populations.

Fariello MI, Servin B, Tosser-Klopp G, Rupp R, Moreno C; International Sheep Genomics Consortium, San Cristobal M, Boitard S.

PLoS One. 2014 Aug 15;9(8):e103813. doi: 10.1371/journal.pone.0103813. eCollection 2014.


Functional investigation of a QTL affecting resistance to Haemonchus contortus in sheep.

Sallé G, Moreno C, Boitard S, Ruesche J, Tircazes-Secula A, Bouvier F, Aletru M, Weisbecker JL, Prévot F, Bergeaud JP, Trumel C, Grisez C, Liénard E, Jacquiet P.

Vet Res. 2014 Jun 17;45:68. doi: 10.1186/1297-9716-45-68.


SNPs for parentage testing and traceability in globally diverse breeds of sheep.

Heaton MP, Leymaster KA, Kalbfleisch TS, Kijas JW, Clarke SM, McEwan J, Maddox JF, Basnayake V, Petrik DT, Simpson B, Smith TP, Chitko-McKown CG; International Sheep Genomics Consortium.

PLoS One. 2014 Apr 16;9(4):e94851. doi: 10.1371/journal.pone.0094851. eCollection 2014.


Polymorphisms in twelve candidate genes are associated with growth, muscle lipid profile and meat quality traits in eleven European cattle breeds.

Sevane N, Armstrong E, Wiener P, Pong Wong R, Dunner S; GemQual Consortium.

Mol Biol Rep. 2014 Jul;41(7):4721-31. doi: 10.1007/s11033-014-3343-y. Epub 2014 Apr 10.


Design and characterization of a 52K SNP chip for goats.

Tosser-Klopp G, Bardou P, Bouchez O, Cabau C, Crooijmans R, Dong Y, Donnadieu-Tonon C, Eggen A, Heuven HC, Jamli S, Jiken AJ, Klopp C, Lawley CT, McEwan J, Martin P, Moreno CR, Mulsant P, Nabihoudine I, Pailhoux E, Palhière I, Rupp R, Sarry J, Sayre BL, Tircazes A, Jun Wang, Wang W, Zhang W; International Goat Genome Consortium.

PLoS One. 2014 Jan 22;9(1):e86227. doi: 10.1371/journal.pone.0086227. eCollection 2014.


Skeletal muscle glycogen phosphorylase is irreversibly inhibited by mercury: molecular, cellular and kinetic aspects.

Xu X, Mathieu C, Boitard SE, Dairou J, Dupret JM, Agbulut O, Rodrigues-Lima F.

FEBS Lett. 2014 Jan 3;588(1):138-42. doi: 10.1016/j.febslet.2013.11.021. Epub 2013 Nov 21.


Genome-wide linkage disequilibrium in the Blonde d'Aquitaine cattle breed.

Beghain J, Boitard S, Weiss B, Boussaha M, Gut I, Rocha D.

J Anim Breed Genet. 2013 Aug;130(4):294-302. doi: 10.1111/j.1439-0388.2012.01020.x. Epub 2012 Aug 17.


Efficacy of epicardially delivered adipose stroma cell sheets in dilated cardiomyopathy.

Hamdi H, Boitard SE, Planat-Benard V, Pouly J, Neamatalla H, Joanne P, Perier MC, Bellamy V, Casteilla L, Li Z, Hagège AA, Mericskay M, Menasché P, Agbulut O.

Cardiovasc Res. 2013 Sep 1;99(4):640-7. doi: 10.1093/cvr/cvt149. Epub 2013 Jun 13.


Detection of signatures of selective sweeps in the Blonde d'Aquitaine cattle breed.

Boitard S, Rocha D.

Anim Genet. 2013 Aug;44(5):579-83. doi: 10.1111/age.12042. Epub 2013 May 6.


Genes involved in muscle lipid composition in 15 European Bos taurus breeds.

Dunner S, Sevane N, Garcia D, Levéziel H, Williams JL, Mangin B, Valentini A; GeMQual Consortium.

Anim Genet. 2013 Aug;44(5):493-501. doi: 10.1111/age.12044. Epub 2013 Apr 23.


Genetic testing for TMEM154 mutations associated with lentivirus susceptibility in sheep.

Heaton MP, Kalbfleisch TS, Petrik DT, Simpson B, Kijas JW, Clawson ML, Chitko-McKown CG, Harhay GP, Leymaster KA; International Sheep Genomics Consortium.

PLoS One. 2013;8(2):e55490. doi: 10.1371/journal.pone.0055490. Epub 2013 Feb 11.


Pool-hmm: a Python program for estimating the allele frequency spectrum and detecting selective sweeps from next generation sequencing of pooled samples.

Boitard S, Kofler R, Françoise P, Robelin D, Schlötterer C, Futschik A.

Mol Ecol Resour. 2013 Mar;13(2):337-40. doi: 10.1111/1755-0998.12063. Epub 2013 Jan 11.


Detecting signatures of selection through haplotype differentiation among hierarchically structured populations.

Fariello MI, Boitard S, Naya H, SanCristobal M, Servin B.

Genetics. 2013 Mar;193(3):929-41. doi: 10.1534/genetics.112.147231. Epub 2013 Jan 10.


Detecting selective sweeps from pooled next-generation sequencing samples.

Boitard S, Schlötterer C, Nolte V, Pandey RV, Futschik A.

Mol Biol Evol. 2012 Sep;29(9):2177-86. doi: 10.1093/molbev/mss090. Epub 2012 Mar 12.


Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection.

Kijas JW, Lenstra JA, Hayes B, Boitard S, Porto Neto LR, San Cristobal M, Servin B, McCulloch R, Whan V, Gietzen K, Paiva S, Barendse W, Ciani E, Raadsma H, McEwan J, Dalrymple B; International Sheep Genomics Consortium Members.

PLoS Biol. 2012 Feb;10(2):e1001258. doi: 10.1371/journal.pbio.1001258. Epub 2012 Feb 7.


Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model.

Douaud M, Feve K, Pituello F, Gourichon D, Boitard S, Leguern E, Coquerelle G, Vieaud A, Batini C, Naquet R, Vignal A, Tixier-Boichard M, Pitel F.

PLoS One. 2011;6(10):e26932. doi: 10.1371/journal.pone.0026932. Epub 2011 Oct 27.


Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems.

Lê Cao KA, Boitard S, Besse P.

BMC Bioinformatics. 2011 Jun 22;12:253. doi: 10.1186/1471-2105-12-253.


Genetic characterization of the Blonde d'Aquitaine cattle breed using microsatellite markers and relationship with three other French cattle populations.

Amigues Y, Boitard S, Bertrand C, Sancristobal M, Rocha D.

J Anim Breed Genet. 2011 Jun;128(3):201-8. doi: 10.1111/j.1439-0388.2010.00890.x. Epub 2011 Jan 12.

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