Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 48

1.

The adult nasopharyngeal microbiome as a determinant of pneumococcal acquisition.

Cremers AJ, Zomer AL, Gritzfeld JF, Ferwerda G, van Hijum SA, Ferreira DM, Shak JR, Klugman KP, Boekhorst J, Timmerman HM, de Jonge MI, Gordon SB, Hermans PW.

Microbiome. 2014 Dec 15;2:44. doi: 10.1186/2049-2618-2-44. eCollection 2014.

2.

T lymphocytes control microbial composition by regulating the abundance of Vibrio in the zebrafish gut.

Brugman S, Schneeberger K, Witte M, Klein MR, van den Bogert B, Boekhorst J, Timmerman HM, Boes ML, Kleerebezem M, Nieuwenhuis EE.

Gut Microbes. 2014;5(6):737-47. doi: 10.4161/19490976.2014.972228.

PMID:
25536157
3.

Sexually dimorphic characteristics of the small intestine and colon of prepubescent C57BL/6 mice.

Steegenga WT, Mischke M, Lute C, Boekschoten MV, Pruis MG, Lendvai A, Verkade HJ, Boekhorst J, Timmerman HM, Plösch T, Müller M.

Biol Sex Differ. 2014 Aug 29;5:11. doi: 10.1186/s13293-014-0011-9. eCollection 2014.

4.

Iron fortification adversely affects the gut microbiome, increases pathogen abundance and induces intestinal inflammation in Kenyan infants.

Jaeggi T, Kortman GA, Moretti D, Chassard C, Holding P, Dostal A, Boekhorst J, Timmerman HM, Swinkels DW, Tjalsma H, Njenga J, Mwangi A, Kvalsvig J, Lacroix C, Zimmermann MB.

Gut. 2014 Aug 20. pii: gutjnl-2014-307720. doi: 10.1136/gutjnl-2014-307720. [Epub ahead of print]

PMID:
25143342
5.

Degenerate target sites mediate rapid primed CRISPR adaptation.

Fineran PC, Gerritzen MJ, Suárez-Diez M, Künne T, Boekhorst J, van Hijum SA, Staals RH, Brouns SJ.

Proc Natl Acad Sci U S A. 2014 Apr 22;111(16):E1629-38. doi: 10.1073/pnas.1400071111. Epub 2014 Apr 7.

6.

Comparative genomics analysis of Streptococcus isolates from the human small intestine reveals their adaptation to a highly dynamic ecosystem.

Van den Bogert B, Boekhorst J, Herrmann R, Smid EJ, Zoetendal EG, Kleerebezem M.

PLoS One. 2013 Dec 30;8(12):e83418. doi: 10.1371/journal.pone.0083418. eCollection 2013.

7.

Draft Genome Sequence of Enterococcus sp. Strain HSIEG1, Isolated from the Human Small Intestine.

van den Bogert B, Boekhorst J, Smid EJ, Zoetendal EG, Kleerebezem M.

Genome Announc. 2013 Dec 12;1(6). pii: e01013-13. doi: 10.1128/genomeA.01013-13.

8.

Draft Genome Sequence of Veillonella parvula HSIVP1, Isolated from the Human Small Intestine.

van den Bogert B, Boekhorst J, Smid EJ, Zoetendal EG, Kleerebezem M.

Genome Announc. 2013 Dec 5;1(6). pii: e00977-13. doi: 10.1128/genomeA.00977-13.

9.

A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.

Leimena MM, Ramiro-Garcia J, Davids M, van den Bogert B, Smidt H, Smid EJ, Boekhorst J, Zoetendal EG, Schaap PJ, Kleerebezem M.

BMC Genomics. 2013 Aug 2;14:530. doi: 10.1186/1471-2164-14-530.

10.

Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity.

Smokvina T, Wels M, Polka J, Chervaux C, Brisse S, Boekhorst J, van Hylckama Vlieg JE, Siezen RJ.

PLoS One. 2013 Jul 19;8(7):e68731. doi: 10.1371/journal.pone.0068731. Print 2013.

11.

Diversity of human small intestinal Streptococcus and Veillonella populations.

van den Bogert B, Erkus O, Boekhorst J, de Goffau M, Smid EJ, Zoetendal EG, Kleerebezem M.

FEMS Microbiol Ecol. 2013 Aug;85(2):376-88. doi: 10.1111/1574-6941.12127. Epub 2013 Apr 25.

12.

Genome sequence of Lactobacillus pentosus KCA1: vaginal isolate from a healthy premenopausal woman.

Anukam KC, Macklaim JM, Gloor GB, Reid G, Boekhorst J, Renckens B, van Hijum SA, Siezen RJ.

PLoS One. 2013;8(3):e59239. doi: 10.1371/journal.pone.0059239. Epub 2013 Mar 19.

13.

Complete Genome Sequence of Anoxybacillus flavithermus TNO-09.006, a Thermophilic Sporeformer Associated with a Dairy-Processing Environment.

Caspers MP, Boekhorst J, Abee T, Siezen RJ, Kort R.

Genome Announc. 2013 Jan;1(1). pii: e00010-13. doi: 10.1128/genomeA.00010-13. Epub 2013 Feb 28.

14.

Microbiome dynamics of human epidermis following skin barrier disruption.

Zeeuwen PL, Boekhorst J, van den Bogaard EH, de Koning HD, van de Kerkhof PM, Saulnier DM, van Swam II, van Hijum SA, Kleerebezem M, Schalkwijk J, Timmerman HM.

Genome Biol. 2012 Nov 15;13(11):R101. doi: 10.1186/gb-2012-13-11-r101.

15.

Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?

Touw WG, Bayjanov JR, Overmars L, Backus L, Boekhorst J, Wels M, van Hijum SA.

Brief Bioinform. 2013 May;14(3):315-26. doi: 10.1093/bib/bbs034. Epub 2012 Jul 10.

16.

Genome sequence of the naturally plasmid-free Lactobacillus plantarum strain NC8 (CCUG 61730).

Axelsson L, Rud I, Naterstad K, Blom H, Renckens B, Boekhorst J, Kleerebezem M, van Hijum S, Siezen RJ.

J Bacteriol. 2012 May;194(9):2391-2. doi: 10.1128/JB.00141-12.

17.

F8 gene mutation type and inhibitor development in patients with severe hemophilia A: systematic review and meta-analysis.

Gouw SC, van den Berg HM, Oldenburg J, Astermark J, de Groot PG, Margaglione M, Thompson AR, van Heerde W, Boekhorst J, Miller CH, le Cessie S, van der Bom JG.

Blood. 2012 Mar 22;119(12):2922-34. doi: 10.1182/blood-2011-09-379453. Epub 2012 Jan 26. Review.

18.

Database independent proteomics analysis of the ostrich and human proteome.

Altelaar AF, Navarro D, Boekhorst J, van Breukelen B, Snel B, Mohammed S, Heck AJ.

Proc Natl Acad Sci U S A. 2012 Jan 10;109(2):407-12. doi: 10.1073/pnas.1108399108. Epub 2011 Dec 22.

19.

Complete resequencing and reannotation of the Lactobacillus plantarum WCFS1 genome.

Siezen RJ, Francke C, Renckens B, Boekhorst J, Wels M, Kleerebezem M, van Hijum SA.

J Bacteriol. 2012 Jan;194(1):195-6. doi: 10.1128/JB.06275-11.

20.

Evaluating experimental bias and completeness in comparative phosphoproteomics analysis.

Boekhorst J, Boersema PJ, Tops BB, van Breukelen B, Heck AJ, Snel B.

PLoS One. 2011;6(8):e23276. doi: 10.1371/journal.pone.0023276. Epub 2011 Aug 10.

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Loading ...
Write to the Help Desk