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Items: 1 to 20 of 61

1.

Analysis of 589,306 genomes identifies individuals resilient to severe Mendelian childhood diseases.

Chen R, Shi L, Hakenberg J, Naughton B, Sklar P, Zhang J, Zhou H, Tian L, Prakash O, Lemire M, Sleiman P, Cheng WY, Chen W, Shah H, Shen Y, Fromer M, Omberg L, Deardorff MA, Zackai E, Bobe JR, Levin E, Hudson TJ, Groop L, Wang J, Hakonarson H, Wojcicki A, Diaz GA, Edelmann L, Schadt EE, Friend SH.

Nat Biotechnol. 2016 Apr 11. doi: 10.1038/nbt.3514. [Epub ahead of print]

PMID:
27065010
2.

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

Braasch I, Gehrke AR, Smith JJ, Kawasaki K, Manousaki T, Pasquier J, Amores A, Desvignes T, Batzel P, Catchen J, Berlin AM, Campbell MS, Barrell D, Martin KJ, Mulley JF, Ravi V, Lee AP, Nakamura T, Chalopin D, Fan S, Wcisel D, Cañestro C, Sydes J, Beaudry FE, Sun Y, Hertel J, Beam MJ, Fasold M, Ishiyama M, Johnson J, Kehr S, Lara M, Letaw JH, Litman GW, Litman RT, Mikami M, Ota T, Saha NR, Williams L, Stadler PF, Wang H, Taylor JS, Fontenot Q, Ferrara A, Searle SM, Aken B, Yandell M, Schneider I, Yoder JA, Volff JN, Meyer A, Amemiya CT, Venkatesh B, Holland PW, Guiguen Y, Bobe J, Shubin NH, Di Palma F, Alföldi J, Lindblad-Toh K, Postlethwait JH.

Nat Genet. 2016 Apr;48(4):427-37. doi: 10.1038/ng.3526. Epub 2016 Mar 7.

PMID:
26950095
3.

Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing.

Juanchich A, Bardou P, Rué O, Gabillard JC, Gaspin C, Bobe J, Guiguen Y.

BMC Genomics. 2016 Mar 1;17(1):164. doi: 10.1186/s12864-016-2505-9.

4.

X-Linked Retinitis Pigmentosa 2 Is a Novel Maternal-Effect Gene Required for Left-Right Asymmetry in Zebrafish.

Desvignes T, Nguyen T, Chesnel F, Bouleau A, Fauvel C, Bobe J.

Biol Reprod. 2015 Aug;93(2):42. doi: 10.1095/biolreprod.115.130575. Epub 2015 Jul 1.

PMID:
26134862
5.

Transfection of isolated rainbow trout, Oncorhynchus mykiss, granulosa cells through chemical transfection and electroporation at 12°C.

Marivin E, Mourot B, Loyer P, Rime H, Bobe J, Fostier A.

Gen Comp Endocrinol. 2015 Sep 15;221:165-72. doi: 10.1016/j.ygcen.2015.03.012. Epub 2015 May 6.

PMID:
25957917
6.

Effects of the anti-androgen cyproterone acetate (CPA) on oocyte meiotic maturation in rainbow trout (Oncorhynchus mykiss).

Rime H, Nguyen T, Ombredane K, Fostier A, Bobe J.

Aquat Toxicol. 2015 Jul;164:34-42. doi: 10.1016/j.aquatox.2015.04.009. Epub 2015 Apr 9.

PMID:
25911576
7.

A comparison between egg trancriptomes of cod and salmon reveals species-specific traits in eggs for each species.

Wargelius A, Furmanek T, Montfort J, Le Cam A, Kleppe L, Juanchich A, Edvardsen RB, Taranger GL, Bobe J.

Mol Reprod Dev. 2015 May;82(5):397-404. doi: 10.1002/mrd.22487. Epub 2015 Apr 23.

PMID:
25908546
8.

Inhibition of zygotic DNA repair: transcriptome analysis of the offspring in trout (Oncorhynchus mykiss).

Fernández-Díez C, González-Rojo S, Montfort J, Le Cam A, Bobe J, Robles V, Pérez-Cerezales S, Herráez MP.

Reproduction. 2015 Jan;149(1):101-11. doi: 10.1530/REP-14-0382.

9.

Maternally inherited npm2 mRNA is crucial for egg developmental competence in zebrafish.

Bouleau A, Desvignes T, Traverso JM, Nguyen T, Chesnel F, Fauvel C, Bobe J.

Biol Reprod. 2014 Aug;91(2):43. doi: 10.1095/biolreprod.114.119925. Epub 2014 Jul 9.

10.

Sex hormone-binding globulins characterization and gonadal gene expression during sex differentiation in the rainbow trout, Oncorhynchus mykiss.

Marivin E, Yano A, Guérin A, Nguyen TV, Fostier A, Bobe J, Guiguen Y.

Mol Reprod Dev. 2014 Aug;81(8):757-65. doi: 10.1002/mrd.22344. Epub 2014 Jun 16.

PMID:
24889418
11.

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates.

Berthelot C, Brunet F, Chalopin D, Juanchich A, Bernard M, Noël B, Bento P, Da Silva C, Labadie K, Alberti A, Aury JM, Louis A, Dehais P, Bardou P, Montfort J, Klopp C, Cabau C, Gaspin C, Thorgaard GH, Boussaha M, Quillet E, Guyomard R, Galiana D, Bobe J, Volff JN, Genêt C, Wincker P, Jaillon O, Roest Crollius H, Guiguen Y.

Nat Commun. 2014 Apr 22;5:3657. doi: 10.1038/ncomms4657.

12.

Harvard Personal Genome Project: lessons from participatory public research.

Ball MP, Bobe JR, Chou MF, Clegg T, Estep PW, Lunshof JE, Vandewege W, Zaranek A, Church GM.

Genome Med. 2014 Feb 28;6(2):10. doi: 10.1186/gm527.

13.

The founding charter of the Genomic Observatories Network.

Davies N, Field D, Amaral-Zettler L, Clark MS, Deck J, Drummond A, Faith DP, Geller J, Gilbert J, Glöckner FO, Hirsch PR, Leong JA, Meyer C, Obst M, Planes S, Scholin C, Vogler AP, Gates RD, Toonen R, Berteaux-Lecellier V, Barbier M, Barker K, Bertilsson S, Bicak M, Bietz MJ, Bobe J, Bodrossy L, Borja A, Coddington J, Fuhrman J, Gerdts G, Gillespie R, Goodwin K, Hanson PC, Hero JM, Hoekman D, Jansson J, Jeanthon C, Kao R, Klindworth A, Knight R, Kottmann R, Koo MS, Kotoulas G, Lowe AJ, Marteinsson VT, Meyer F, Morrison N, Myrold DD, Pafilis E, Parker S, Parnell JJ, Polymenakou PN, Ratnasingham S, Roderick GK, Rodriguez-Ezpeleta N, Schonrogge K, Simon N, Valette-Silver NJ, Springer YP, Stone GN, Stones-Havas S, Sansone SA, Thibault KM, Wecker P, Wichels A, Wooley JC, Yahara T, Zingone A; GOs-COS.

Gigascience. 2014 Mar 7;3(1):2. doi: 10.1186/2047-217X-3-2.

14.

Connectivity of vertebrate genomes: Paired-related homeobox (Prrx) genes in spotted gar, basal teleosts, and tetrapods.

Braasch I, Guiguen Y, Loker R, Letaw JH, Ferrara A, Bobe J, Postlethwait JH.

Comp Biochem Physiol C Toxicol Pharmacol. 2014 Jun;163:24-36. doi: 10.1016/j.cbpc.2014.01.005. Epub 2014 Jan 30.

15.

Identification of differentially expressed miRNAs and their potential targets during fish ovarian development.

Juanchich A, Le Cam A, Montfort J, Guiguen Y, Bobe J.

Biol Reprod. 2013 May 23;88(5):128. doi: 10.1095/biolreprod.112.105361. Print 2013 May.

16.

Do not put all teleosts in one net: focus on the sox2 and pou2 genes.

Marandel L, Labbe C, Bobe J, Jammes H, Lareyre JJ, Le Bail PY.

Comp Biochem Physiol B Biochem Mol Biol. 2013 Feb;164(2):69-79. doi: 10.1016/j.cbpb.2012.10.005. Epub 2012 Nov 8.

PMID:
23142214
17.

Oocyte-somatic cells interactions, lessons from evolution.

Charlier C, Montfort J, Chabrol O, Brisard D, Nguyen T, Le Cam A, Richard-Parpaillon L, Moreews F, Pontarotti P, Uzbekova S, Chesnel F, Bobe J.

BMC Genomics. 2012 Oct 19;13:560. doi: 10.1186/1471-2164-13-560.

18.

A public resource facilitating clinical use of genomes.

Ball MP, Thakuria JV, Zaranek AW, Clegg T, Rosenbaum AM, Wu X, Angrist M, Bhak J, Bobe J, Callow MJ, Cano C, Chou MF, Chung WK, Douglas SM, Estep PW, Gore A, Hulick P, Labarga A, Lee JH, Lunshof JE, Kim BC, Kim JI, Li Z, Murray MF, Nilsen GB, Peters BA, Raman AM, Rienhoff HY, Robasky K, Wheeler MT, Vandewege W, Vorhaus DB, Yang JL, Yang L, Aach J, Ashley EA, Drmanac R, Kim SJ, Li JB, Peshkin L, Seidman CE, Seo JS, Zhang K, Rehm HL, Church GM.

Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):11920-7. doi: 10.1073/pnas.1201904109. Epub 2012 Jul 13.

19.

The Nme gene family in fish.

Desvignes T, Fostier A, Fauvel C, Bobe J.

Fish Physiol Biochem. 2013 Feb;39(1):53-8. doi: 10.1007/s10695-012-9639-8. Epub 2012 Apr 8. Review.

PMID:
22484598
20.

Characterization of rainbow trout gonad, brain and gill deep cDNA repertoires using a Roche 454-Titanium sequencing approach.

Le Cam A, Bobe J, Bouchez O, Cabau C, Kah O, Klopp C, Lareyre JJ, Le Guen I, Lluch J, Montfort J, Moreews F, Nicol B, Prunet P, Rescan PY, Servili A, Guiguen Y.

Gene. 2012 May 25;500(1):32-9. doi: 10.1016/j.gene.2012.03.053. Epub 2012 Mar 30.

PMID:
22465513
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