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Results: 1 to 20 of 131

1.

Classifying leukemia types with chromatin conformation data.

Rousseau M, Ferraiuolo MA, Crutchley JL, Wang XQ, Miura H, Blanchette M, Dostie J.

Genome Biol. 2014 Apr 30;15(4):R60. doi: 10.1186/gb-2014-15-4-r60.

PMID:
24995990
[PubMed - in process]
Free PMC Article
2.

Optimization of the reference region method for dual pharmacokinetic modeling using Gd-DTPA/MRI and 18 F-FDG/PET.

Poulin E, Lebel R, Croteau E, Blanchette M, Tremblay L, Lecomte R, Bentourkia M, Lepage M.

Magn Reson Med. 2014 Mar 6. doi: 10.1002/mrm.25151. [Epub ahead of print]

PMID:
24604379
[PubMed - as supplied by publisher]
3.

The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts.

Wagner JR, Busche S, Ge B, Kwan T, Pastinen T, Blanchette M.

Genome Biol. 2014 Feb 20;15(2):R37. [Epub ahead of print]

PMID:
24555846
[PubMed - as supplied by publisher]
Free PMC Article
4.

Impact of drug size on brain tumor and brain parenchyma delivery after a blood-brain barrier disruption.

Blanchette M, Tremblay L, Lepage M, Fortin D.

J Cereb Blood Flow Metab. 2014 May;34(5):820-6. doi: 10.1038/jcbfm.2014.14. Epub 2014 Feb 12.

PMID:
24517973
[PubMed - indexed for MEDLINE]
5.

Hox in motion: tracking HoxA cluster conformation during differentiation.

Rousseau M, Crutchley JL, Miura H, Suderman M, Blanchette M, Dostie J.

Nucleic Acids Res. 2014 Feb;42(3):1524-40. doi: 10.1093/nar/gkt998. Epub 2013 Oct 29.

PMID:
24174538
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Open-Phylo: a customizable crowd-computing platform for multiple sequence alignment.

Kwak D, Kam A, Becerra D, Zhou Q, Hops A, Zarour E, Kam A, Sarmenta L, Blanchette M, Waldispühl J.

Genome Biol. 2013;14(10):R116.

PMID:
24148814
[PubMed - in process]
Free PMC Article
7.

Methylation of the DNA/RNA-binding protein Kin17 by METTL22 affects its association with chromatin.

Cloutier P, Lavallée-Adam M, Faubert D, Blanchette M, Coulombe B.

J Proteomics. 2014 Apr 4;100:115-24. doi: 10.1016/j.jprot.2013.10.008. Epub 2013 Oct 16.

PMID:
24140279
[PubMed - in process]
8.

Genome-wide mouse mutagenesis reveals CD45-mediated T cell function as critical in protective immunity to HSV-1.

Caignard G, Leiva-Torres GA, Leney-Greene M, Charbonneau B, Dumaine A, Fodil-Cornu N, Pyzik M, Cingolani P, Schwartzentruber J, Dupaul-Chicoine J, Guo H, Saleh M, Veillette A, Lathrop M, Blanchette M, Majewski J, Pearson A, Vidal SM.

PLoS Pathog. 2013 Sep;9(9):e1003637. doi: 10.1371/journal.ppat.1003637. Epub 2013 Sep 12.

PMID:
24068938
[PubMed - in process]
Free PMC Article
9.

An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions.

Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, Town CD, Edger PP, Pires JC, Schumaker KS, Jarvis DE, Mandáková T, Lysak MA, van den Bergh E, Schranz ME, Harrison PM, Moses AM, Bureau TE, Wright SI, Blanchette M.

Nat Genet. 2013 Aug;45(8):891-8. doi: 10.1038/ng.2684. Epub 2013 Jun 30.

PMID:
23817568
[PubMed - indexed for MEDLINE]
10.

The Capsella rubella genome and the genomic consequences of rapid mating system evolution.

Slotte T, Hazzouri KM, Ågren JA, Koenig D, Maumus F, Guo YL, Steige K, Platts AE, Escobar JS, Newman LK, Wang W, Mandáková T, Vello E, Smith LM, Henz SR, Steffen J, Takuno S, Brandvain Y, Coop G, Andolfatto P, Hu TT, Blanchette M, Clark RM, Quesneville H, Nordborg M, Gaut BS, Lysak MA, Jenkins J, Grimwood J, Chapman J, Prochnik S, Shu S, Rokhsar D, Schmutz J, Weigel D, Wright SI.

Nat Genet. 2013 Jul;45(7):831-5. doi: 10.1038/ng.2669. Epub 2013 Jun 9.

PMID:
23749190
[PubMed - indexed for MEDLINE]
11.

Computational prediction of the localization of microRNAs within their pre-miRNA.

Leclercq M, Diallo AB, Blanchette M.

Nucleic Acids Res. 2013 Aug;41(15):7200-11. doi: 10.1093/nar/gkt466. Epub 2013 Jun 8.

PMID:
23748953
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

SPARCS: a web server to analyze (un)structured regions in coding RNA sequences.

Zhang Y, Ponty Y, Blanchette M, Lécuyer E, Waldispühl J.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W480-5. doi: 10.1093/nar/gkt461. Epub 2013 Jun 8.

PMID:
23748952
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Nuclear import of RNA polymerase II is coupled with nucleocytoplasmic shuttling of the RNA polymerase II-associated protein 2.

Forget D, Lacombe AA, Cloutier P, Lavallée-Adam M, Blanchette M, Coulombe B.

Nucleic Acids Res. 2013 Aug;41(14):6881-91. doi: 10.1093/nar/gkt455. Epub 2013 May 30.

PMID:
23723243
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Positional mapping and candidate gene analysis of the mouse Ccs3 locus that regulates differential susceptibility to carcinogen-induced colorectal cancer.

Meunier C, Van Der Kraak L, Turbide C, Groulx N, Labouba I, Cingolani P, Blanchette M, Yeretssian G, Mes-Masson AM, Saleh M, Beauchemin N, Gros P.

PLoS One. 2013;8(3):e58733. doi: 10.1371/journal.pone.0058733. Epub 2013 Mar 14.

PMID:
23516545
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression.

Taliaferro JM, Aspden JL, Bradley T, Marwha D, Blanchette M, Rio DC.

Genes Dev. 2013 Feb 15;27(4):378-89. doi: 10.1101/gad.210708.112. Epub 2013 Feb 7.

PMID:
23392611
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A newly uncovered group of distantly related lysine methyltransferases preferentially interact with molecular chaperones to regulate their activity.

Cloutier P, Lavallée-Adam M, Faubert D, Blanchette M, Coulombe B.

PLoS Genet. 2013;9(1):e1003210. doi: 10.1371/journal.pgen.1003210. Epub 2013 Jan 17.

PMID:
23349634
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

A flexible ancestral genome reconstruction method based on gapped adjacencies.

Gagnon Y, Blanchette M, El-Mabrouk N.

BMC Bioinformatics. 2012;13 Suppl 19:S4. doi: 10.1186/1471-2105-13-S19-S4. Epub 2012 Dec 19.

PMID:
23281872
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Exploiting ancestral mammalian genomes for the prediction of human transcription factor binding sites.

Blanchette M.

BMC Bioinformatics. 2012;13 Suppl 19:S2. doi: 10.1186/1471-2105-13-S19-S2. Epub 2012 Dec 19.

PMID:
23281809
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Discovery of cell compartment specific protein-protein interactions using affinity purification combined with tandem mass spectrometry.

Lavallée-Adam M, Rousseau J, Domecq C, Bouchard A, Forget D, Faubert D, Blanchette M, Coulombe B.

J Proteome Res. 2013 Jan 4;12(1):272-81. doi: 10.1021/pr300778b. Epub 2012 Dec 4.

PMID:
23157168
[PubMed - indexed for MEDLINE]
20.

Human CWC22 escorts the helicase eIF4AIII to spliceosomes and promotes exon junction complex assembly.

Barbosa I, Haque N, Fiorini F, Barrandon C, Tomasetto C, Blanchette M, Le Hir H.

Nat Struct Mol Biol. 2012 Oct;19(10):983-90. doi: 10.1038/nsmb.2380. Epub 2012 Sep 9.

PMID:
22961380
[PubMed - indexed for MEDLINE]

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