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Results: 1 to 20 of 22

1.

Differences in two-component signal transduction proteins among the genus Brucella: implications for host preference and pathogenesis.

Lavín JL, Binnewies TT, Pisabarro AG, Ussery DW, García-Lobo JM, Oguiza JA.

Vet Microbiol. 2010 Aug 26;144(3-4):478-83. doi: 10.1016/j.vetmic.2010.01.007. Epub 2010 Jan 28.

PMID:
20153589
[PubMed - indexed for MEDLINE]
2.

Genome comparison of bacterial pathogens.

Wassenaar TM, Bohlin J, Binnewies TT, Ussery DW.

Genome Dyn. 2009;6:1-20. doi: 10.1159/000235759. Epub 2009 Aug 19.

PMID:
19696490
[PubMed - in process]
3.

GeneWiz browser: An Interactive Tool for Visualizing Sequenced Chromosomes.

Hallin PF, Stærfeldt HH, Rotenberg E, Binnewies TT, Benham CJ, Ussery DW.

Stand Genomic Sci. 2009 Sep 25;1(2):204-15. doi: 10.4056/sigs.28177.

PMID:
21304658
[PubMed]
Free PMC Article
4.

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq.

Sittka A, Lucchini S, Papenfort K, Sharma CM, Rolle K, Binnewies TT, Hinton JC, Vogel J.

PLoS Genet. 2008 Aug 22;4(8):e1000163. doi: 10.1371/journal.pgen.1000163.

PMID:
18725932
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The complete genome sequence and analysis of the human pathogen Campylobacter lari.

Miller WG, Wang G, Binnewies TT, Parker CT.

Foodborne Pathog Dis. 2008 Aug;5(4):371-86. doi: 10.1089/fpd.2008.0101.

PMID:
18713059
[PubMed - indexed for MEDLINE]
6.

Molecular analysis of the emergence of pandemic Vibrio parahaemolyticus.

Boyd EF, Cohen AL, Naughton LM, Ussery DW, Binnewies TT, Stine OC, Parent MA.

BMC Microbiol. 2008 Jun 30;8:110. doi: 10.1186/1471-2180-8-110.

PMID:
18590559
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571.

Lee KB, De Backer P, Aono T, Liu CT, Suzuki S, Suzuki T, Kaneko T, Yamada M, Tabata S, Kupfer DM, Najar FZ, Wiley GB, Roe B, Binnewies TT, Ussery DW, D'Haeze W, Herder JD, Gevers D, Vereecke D, Holsters M, Oyaizu H.

BMC Genomics. 2008 Jun 4;9:271. doi: 10.1186/1471-2164-9-271.

PMID:
18522759
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The genome BLASTatlas-a GeneWiz extension for visualization of whole-genome homology.

Hallin PF, Binnewies TT, Ussery DW.

Mol Biosyst. 2008 May;4(5):363-71. doi: 10.1039/b717118h. Epub 2008 Mar 17.

PMID:
18414733
[PubMed - indexed for MEDLINE]
9.

The complete genome sequence and analysis of the epsilonproteobacterium Arcobacter butzleri.

Miller WG, Parker CT, Rubenfield M, Mendz GL, Wösten MM, Ussery DW, Stolz JF, Binnewies TT, Hallin PF, Wang G, Malek JA, Rogosin A, Stanker LH, Mandrell RE.

PLoS One. 2007 Dec 26;2(12):e1358.

PMID:
18159241
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Ten years of bacterial genome sequencing: comparative-genomics-based discoveries.

Binnewies TT, Motro Y, Hallin PF, Lund O, Dunn D, La T, Hampson DJ, Bellgard M, Wassenaar TM, Ussery DW.

Funct Integr Genomics. 2006 Jul;6(3):165-85. Epub 2006 May 12. Review.

PMID:
16773396
[PubMed - indexed for MEDLINE]
11.

Genome update: purine strand bias in 280 bacterial genomes.

Champ PC, Binnewies TT, Nielsen N, Zinman G, Kiil K, Wu H, Bohlin J, Ussery DW.

Microbiology. 2006 Mar;152(Pt 3):579-83. No abstract available.

PMID:
16514138
[PubMed - indexed for MEDLINE]
Free Article
12.

Genome update: distribution of two-component transduction systems in 250 bacterial genomes.

Kiil K, Ferchaud JB, David C, Binnewies TT, Wu H, Sicheritz-Pontén T, Willenbrock H, Ussery DW.

Microbiology. 2005 Nov;151(Pt 11):3447-52. No abstract available.

PMID:
16272367
[PubMed - indexed for MEDLINE]
Free Article
13.

Genome update: sigma factors in 240 bacterial genomes.

Kill K, Binnewies TT, Sicheritz-Pontén T, Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW.

Microbiology. 2005 Oct;151(Pt 10):3147-50. No abstract available.

PMID:
16207898
[PubMed - indexed for MEDLINE]
Free Article
14.

Genome update: prediction of membrane proteins in prokaryotic genomes.

Bendtsen JD, Binnewies TT, Hallin PF, Ussery DW.

Microbiology. 2005 Jul;151(Pt 7):2119-21. No abstract available.

PMID:
16000701
[PubMed - indexed for MEDLINE]
Free Article
15.

Genome update: prediction of secreted proteins in 225 bacterial proteomes.

Bendtsen JD, Binnewies TT, Hallin PF, Sicheritz-Pontén T, Ussery DW.

Microbiology. 2005 Jun;151(Pt 6):1725-7. Review. No abstract available.

PMID:
15941981
[PubMed - indexed for MEDLINE]
Free Article
16.

Genome Update: Protein secretion systems in 225 bacterial genomes.

Binnewies TT, Bendtsen JD, Hallin PF, Nielsen N, Wassenaar TM, Pedersen MB, Klemm P, Ussery DW.

Microbiology. 2005 Apr;151(Pt 4):1013-6. No abstract available.

PMID:
15817770
[PubMed - indexed for MEDLINE]
Free Article
17.

Genome update: base skews in 200+ bacterial chromosomes.

Hallin PF, Nielsen N, Devine KM, Binnewies TT, Willenbrock H, Ussery DW.

Microbiology. 2005 Mar;151(Pt 3):633-7. No abstract available.

PMID:
15758208
[PubMed - indexed for MEDLINE]
Free Article
18.

Genome update: 2D clustering of bacterial genomes.

Willenbrock H, Binnewies TT, Hallin PF, Ussery DW.

Microbiology. 2005 Feb;151(Pt 2):333-6. No abstract available.

PMID:
15699184
[PubMed - indexed for MEDLINE]
Free Article
19.

Genome Update: proteome comparisons.

Binnewies TT, Hallin PF, Staerfeldt HH, Ussery DW.

Microbiology. 2005 Jan;151(Pt 1):1-4. No abstract available.

PMID:
15632419
[PubMed - indexed for MEDLINE]
Free Article
20.

Genome update: correlation of bacterial genomic properties.

Hallin PF, Coenye T, Binnewies TT, Jarmer H, Saerfeldt HH, Ussery DW.

Microbiology. 2004 Dec;150(Pt 12):3899-903. No abstract available.

PMID:
15583141
[PubMed - indexed for MEDLINE]
Free Article

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