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AINTEGUMENTA and the D-type cyclin CYCD3;1 regulate root secondary growth and respond to cytokinins.

Randall RS, Miyashima S, Blomster T, Zhang J, Elo A, Karlberg A, Immanen J, Nieminen K, Lee JY, Kakimoto T, Blajecka K, Melnyk CW, Alcasabas A, Forzani C, Matsumoto-Kitano M, Mähönen AP, Bhalerao R, Dewitte W, Helariutta Y, Murray JA.

Biol Open. 2015 Sep 4;4(10):1229-36. doi: 10.1242/bio.013128.


Transcriptional transitions in Nicotiana benthamiana leaves upon induction of oil synthesis by WRINKLED1 homologs from diverse species and tissues.

Grimberg Å, Carlsson AS, Marttila S, Bhalerao R, Hofvander P.

BMC Plant Biol. 2015 Aug 8;15:192. doi: 10.1186/s12870-015-0579-1.


Genome Wide Binding Site Analysis Reveals Transcriptional Coactivation of Cytokinin-Responsive Genes by DELLA Proteins.

Marín-de la Rosa N, Pfeiffer A, Hill K, Locascio A, Bhalerao RP, Miskolczi P, Grønlund AL, Wanchoo-Kohli A, Thomas SG, Bennett MJ, Lohmann JU, Blázquez MA, Alabadí D.

PLoS Genet. 2015 Jul 2;11(7):e1005337. doi: 10.1371/journal.pgen.1005337. eCollection 2015 Jul.


Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha.

Eklund DM, Ishizaki K, Flores-Sandoval E, Kikuchi S, Takebayashi Y, Tsukamoto S, Hirakawa Y, Nonomura M, Kato H, Kouno M, Bhalerao RP, Lagercrantz U, Kasahara H, Kohchi T, Bowman JL.

Plant Cell. 2015 Jun;27(6):1650-69. doi: 10.1105/tpc.15.00065. Epub 2015 Jun 2.


Principal Component Analysis of Event-by-Event Fluctuations.

Bhalerao RS, Ollitrault JY, Pal S, Teaney D.

Phys Rev Lett. 2015 Apr 17;114(15):152301. Epub 2015 Apr 16.


Dual role of tree florigen activation complex component FD in photoperiodic growth control and adaptive response pathways.

Tylewicz S, Tsuji H, Miskolczi P, Petterle A, Azeez A, Jonsson K, Shimamoto K, Bhalerao RP.

Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3140-5. doi: 10.1073/pnas.1423440112. Epub 2015 Feb 23.


Journey to the cell surface--the central role of the trans-Golgi network in plants.

Gendre D, Jonsson K, Boutté Y, Bhalerao RP.

Protoplasma. 2015 Mar;252(2):385-98. doi: 10.1007/s00709-014-0693-1. Epub 2014 Sep 4.


Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners.

Marín-de la Rosa N, Sotillo B, Miskolczi P, Gibbs DJ, Vicente J, Carbonero P, Oñate-Sánchez L, Holdsworth MJ, Bhalerao R, Alabadí D, Blázquez MA.

Plant Physiol. 2014 Oct;166(2):1022-32. doi: 10.1104/pp.114.244723. Epub 2014 Aug 12.


Adventitious root formation in tree species: involvement of transcription factors.

Legué V, Rigal A, Bhalerao RP.

Physiol Plant. 2014 Jun;151(2):192-8. doi: 10.1111/ppl.12197. Review.


A tree ortholog of APETALA1 mediates photoperiodic control of seasonal growth.

Azeez A, Miskolczi P, Tylewicz S, Bhalerao RP.

Curr Biol. 2014 Mar 31;24(7):717-24. doi: 10.1016/j.cub.2014.02.037. Epub 2014 Mar 20.


Auxin gradients across wood-instructive or incidental?

Bhalerao RP, Fischer U.

Physiol Plant. 2014 May;151(1):43-51. doi: 10.1111/ppl.12134. Epub 2013 Dec 27. Review.


Cell wall polysaccharides are mislocalized to the Vacuole in echidna mutants.

McFarlane HE, Watanabe Y, Gendre D, Carruthers K, Levesque-Tremblay G, Haughn GW, Bhalerao RP, Samuels L.

Plant Cell Physiol. 2013 Nov;54(11):1867-80. doi: 10.1093/pcp/pct129. Epub 2013 Sep 20.


ECHIDNA-mediated post-Golgi trafficking of auxin carriers for differential cell elongation.

Boutté Y, Jonsson K, McFarlane HE, Johnson E, Gendre D, Swarup R, Friml J, Samuels L, Robert S, Bhalerao RP.

Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):16259-64. doi: 10.1073/pnas.1309057110. Epub 2013 Sep 16.


Trans-Golgi network localized ECHIDNA/Ypt interacting protein complex is required for the secretion of cell wall polysaccharides in Arabidopsis.

Gendre D, McFarlane HE, Johnson E, Mouille G, Sjödin A, Oh J, Levesque-Tremblay G, Watanabe Y, Samuels L, Bhalerao RP.

Plant Cell. 2013 Jul;25(7):2633-46. doi: 10.1105/tpc.113.112482. Epub 2013 Jul 5.


The Norway spruce genome sequence and conifer genome evolution.

Nystedt B, Street NR, Wetterbom A, Zuccolo A, Lin YC, Scofield DG, Vezzi F, Delhomme N, Giacomello S, Alexeyenko A, Vicedomini R, Sahlin K, Sherwood E, Elfstrand M, Gramzow L, Holmberg K, Hällman J, Keech O, Klasson L, Koriabine M, Kucukoglu M, Käller M, Luthman J, Lysholm F, Niittylä T, Olson A, Rilakovic N, Ritland C, Rosselló JA, Sena J, Svensson T, Talavera-López C, Theißen G, Tuominen H, Vanneste K, Wu ZQ, Zhang B, Zerbe P, Arvestad L, Bhalerao R, Bohlmann J, Bousquet J, Garcia Gil R, Hvidsten TR, de Jong P, MacKay J, Morgante M, Ritland K, Sundberg B, Thompson SL, Van de Peer Y, Andersson B, Nilsson O, Ingvarsson PK, Lundeberg J, Jansson S.

Nature. 2013 May 30;497(7451):579-84. doi: 10.1038/nature12211. Epub 2013 May 22.


Daylength mediated control of seasonal growth patterns in perennial trees.

Petterle A, Karlberg A, Bhalerao RP.

Curr Opin Plant Biol. 2013 Jun;16(3):301-6. doi: 10.1016/j.pbi.2013.02.006. Epub 2013 Mar 7. Review.


Endodermal ABA signaling promotes lateral root quiescence during salt stress in Arabidopsis seedlings.

Duan L, Dietrich D, Ng CH, Chan PM, Bhalerao R, Bennett MJ, Dinneny JR.

Plant Cell. 2013 Jan;25(1):324-41. doi: 10.1105/tpc.112.107227. Epub 2013 Jan 22.


Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth.

Kaewthai N, Gendre D, Eklöf JM, Ibatullin FM, Ezcurra I, Bhalerao RP, Brumer H.

Plant Physiol. 2013 Jan;161(1):440-54. doi: 10.1104/pp.112.207308. Epub 2012 Oct 25.


The AINTEGUMENTA LIKE1 homeotic transcription factor PtAIL1 controls the formation of adventitious root primordia in poplar.

Rigal A, Yordanov YS, Perrone I, Karlberg A, Tisserant E, Bellini C, Busov VB, Martin F, Kohler A, Bhalerao R, Legué V.

Plant Physiol. 2012 Dec;160(4):1996-2006. doi: 10.1104/pp.112.204453. Epub 2012 Oct 17.


Short day-mediated cessation of growth requires the downregulation of AINTEGUMENTALIKE1 transcription factor in hybrid aspen.

Karlberg A, Bako L, Bhalerao RP.

PLoS Genet. 2011 Nov;7(11):e1002361. doi: 10.1371/journal.pgen.1002361. Epub 2011 Nov 3.

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