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Items: 1 to 20 of 92


RNA-Seq analysis reveals new evidence for inflammation-related changes in aged kidney.

Park D, Kim BC, Kim CH, Choi YJ, Jeong HO, Kim ME, Lee JS, Park MH, Chung KW, Kim DH, Lee J, Im DS, Yoon S, Lee S, Yu BP, Bhak J, Chung HY.

Oncotarget. 2016 May 3. doi: 10.18632/oncotarget.9152. [Epub ahead of print]


Comparison of two high-throughput semiconductor chip sequencing platforms in noninvasive prenatal testing for Down syndrome in early pregnancy.

Kim S, Jung H, Han SH, Lee S, Kwon J, Kim MG, Chu H, Chen H, Han K, Kwak H, Park S, Joo HJ, Kim BC, Bhak J.

BMC Med Genomics. 2016 Apr 30;9(1):22. doi: 10.1186/s12920-016-0182-9.


Genomic legacy of the African cheetah, Acinonyx jubatus.

Dobrynin P, Liu S, Tamazian G, Xiong Z, Yurchenko AA, Krasheninnikova K, Kliver S, Schmidt-Küntzel A, Koepfli KP, Johnson W, Kuderna LF, García-Pérez R, Manuel Md, Godinez R, Komissarov A, Makunin A, Brukhin V, Qiu W, Zhou L, Li F, Yi J, Driscoll C, Antunes A, Oleksyk TK, Eizirik E, Perelman P, Roelke M, Wildt D, Diekhans M, Marques-Bonet T, Marker L, Bhak J, Wang J, Zhang G, O'Brien SJ.

Genome Biol. 2015 Dec 10;16:277. doi: 10.1186/s13059-015-0837-4.


The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures.

Chung O, Jin S, Cho YS, Lim J, Kim H, Jho S, Kim HM, Jun J, Lee H, Chon A, Ko J, Edwards J, Weber JA, Han K, O'Brien SJ, Manica A, Bhak J, Paek WK.

Genome Biol. 2015 Oct 21;16:215. doi: 10.1186/s13059-015-0780-4.


Ancient Ethiopian genome reveals extensive Eurasian admixture throughout the African continent.

Gallego Llorente M, Jones ER, Eriksson A, Siska V, Arthur KW, Arthur JW, Curtis MC, Stock JT, Coltorti M, Pieruccini P, Stretton S, Brock F, Higham T, Park Y, Hofreiter M, Bradley DG, Bhak J, Pinhasi R, Manica A.

Science. 2015 Nov 13;350(6262):820-2. doi: 10.1126/science.aad2879. Epub 2015 Oct 8. Erratum in: Science. 2016 Feb 19;351(6275). pii: aaf3945. doi: 10.1126/science.aaf3945.


Profiling age-related epigenetic markers of stomach adenocarcinoma in young and old subjects.

Kim BC, Jeong HO, Park D, Kim CH, Lee EK, Kim DH, Im E, Kim ND, Lee S, Yu BP, Bhak J, Chung HY.

Cancer Inform. 2015 Apr 20;14:47-54. doi: 10.4137/CIN.S16912. eCollection 2015.


SLC15A2 genomic variation is associated with the extraordinary response of sorafenib treatment: whole-genome analysis in patients with hepatocellular carcinoma.

Lee YS, Kim BH, Kim BC, Shin A, Kim JS, Hong SH, Hwang JA, Lee JA, Nam S, Lee SH, Bhak J, Park JW.

Oncotarget. 2015 Jun 30;6(18):16449-60.


Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

Ilyas M, Kim JS, Cooper J, Shin YA, Kim HM, Cho YS, Hwang S, Kim H, Moon J, Chung O, Jun J, Rastogi A, Song S, Ko J, Manica A, Rahman Z, Husnain T, Bhak J.

BMC Genomics. 2015 Mar 12;16:172. doi: 10.1186/s12864-015-1290-1.


Genome-wide analysis of DNA methylation before-and after exercise in the thoroughbred horse with MeDIP-Seq.

Gim JA, Hong CP, Kim DS, Moon JW, Choi Y, Eo J, Kwon YJ, Lee JR, Jung YD, Bae JH, Choi BH, Ko J, Song S, Ahn K, Ha HS, Yang YM, Lee HK, Park KD, Do KT, Han K, Yi JM, Cha HJ, Ayarpadikannan S, Cho BW, Bhak J, Kim HS.

Mol Cells. 2015 Mar;38(3):210-20. doi: 10.14348/molcells.2015.2138. Epub 2015 Jan 30.


HEpD: a database describing epigenetic differences between Thoroughbred and Jeju horses.

Gim JA, Lee S, Kim DS, Jeong KS, Hong CP, Bae JH, Moon JW, Choi YS, Cho BW, Cho HG, Bhak J, Kim HS.

Gene. 2015 Apr 10;560(1):83-8. doi: 10.1016/j.gene.2015.01.047. Epub 2015 Jan 28.


Insights into the evolution of longevity from the bowhead whale genome.

Keane M, Semeiks J, Webb AE, Li YI, Quesada V, Craig T, Madsen LB, van Dam S, Brawand D, Marques PI, Michalak P, Kang L, Bhak J, Yim HS, Grishin NV, Nielsen NH, Heide-Jørgensen MP, Oziolor EM, Matson CW, Church GM, Stuart GW, Patton JC, George JC, Suydam R, Larsen K, López-Otín C, O'Connell MJ, Bickham JW, Thomsen B, de Magalhães JP.

Cell Rep. 2015 Jan 6;10(1):112-22. doi: 10.1016/j.celrep.2014.12.008.


Whole genome sequence and analysis of the Marwari horse breed and its genetic origin.

Jun J, Cho YS, Hu H, Kim HM, Jho S, Gadhvi P, Park KM, Lim J, Paek WK, Han K, Manica A, Edwards JS, Bhak J.

BMC Genomics. 2014;15 Suppl 9:S4. doi: 10.1186/1471-2164-15-S9-S4. Epub 2014 Dec 8.


The feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platform.

Jeon YJ, Zhou Y, Li Y, Guo Q, Chen J, Quan S, Zhang A, Zheng H, Zhu X, Lin J, Xu H, Wu A, Park SG, Kim BC, Joo HJ, Chen H, Bhak J.

PLoS One. 2014 Oct 20;9(10):e110240. doi: 10.1371/journal.pone.0110240. eCollection 2014.


New lung cancer panel for high-throughput targeted resequencing.

Kim EH, Lee S, Park J, Lee K, Bhak J, Kim BC.

Genomics Inform. 2014 Jun;12(2):50-7. doi: 10.5808/GI.2014.12.2.50. Epub 2014 Jun 30.


Genome-wide analysis of DNA methylation patterns in horse.

Lee JR, Hong CP, Moon JW, Jung YD, Kim DS, Kim TH, Gim JA, Bae JH, Choi Y, Eo J, Kwon YJ, Song S, Ko J, Yang YM, Lee HK, Park KD, Ahn K, Do KT, Ha HS, Han K, Yi JM, Cha HJ, Cho BW, Bhak J, Kim HS.

BMC Genomics. 2014 Jul 15;15:598. doi: 10.1186/1471-2164-15-598.


Whole-genome analysis of a patient with early-stage small-cell lung cancer.

Han JY, Lee YS, Kim BC, Lee GK, Lee S, Kim EH, Kim HM, Bhak J.

Pharmacogenomics J. 2014 Dec;14(6):503-8. doi: 10.1038/tpj.2014.17. Epub 2014 Apr 8.


Identification and characterization of microRNAs in normal equine tissues by Next Generation Sequencing.

Kim MC, Lee SW, Ryu DY, Cui FJ, Bhak J, Kim Y.

PLoS One. 2014 Apr 2;9(4):e93662. doi: 10.1371/journal.pone.0093662. eCollection 2014.


Genomic profile analysis of diffuse-type gastric cancers.

Lee YS, Cho YS, Lee GK, Lee S, Kim YW, Jho S, Kim HM, Hong SH, Hwang JA, Kim SY, Hong D, Choi IJ, Kim BC, Kim BC, Kim CH, Choi H, Kim Y, Kim KW, Kong G, Kim HL, Bhak J, Lee SH, Lee JS.

Genome Biol. 2014 Apr 1;15(4):R55. doi: 10.1186/gb-2014-15-4-r55.


PPP1R1B-STARD3 chimeric fusion transcript in human gastric cancer promotes tumorigenesis through activation of PI3K/AKT signaling.

Yun SM, Yoon K, Lee S, Kim E, Kong SH, Choe J, Kang JM, Han TS, Kim P, Choi Y, Jho S, Yoo H, Bhak J, Yang HK, Kim SJ.

Oncogene. 2014 Nov 13;33(46):5341-7. doi: 10.1038/onc.2013.472. Epub 2013 Nov 25.


Minke whale genome and aquatic adaptation in cetaceans.

Yim HS, Cho YS, Guang X, Kang SG, Jeong JY, Cha SS, Oh HM, Lee JH, Yang EC, Kwon KK, Kim YJ, Kim TW, Kim W, Jeon JH, Kim SJ, Choi DH, Jho S, Kim HM, Ko J, Kim H, Shin YA, Jung HJ, Zheng Y, Wang Z, Chen Y, Chen M, Jiang A, Li E, Zhang S, Hou H, Kim TH, Yu L, Liu S, Ahn K, Cooper J, Park SG, Hong CP, Jin W, Kim HS, Park C, Lee K, Chun S, Morin PA, O'Brien SJ, Lee H, Kimura J, Moon DY, Manica A, Edwards J, Kim BC, Kim S, Wang J, Bhak J, Lee HS, Lee JH.

Nat Genet. 2014 Jan;46(1):88-92. doi: 10.1038/ng.2835. Epub 2013 Nov 24.

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