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Results: 8

1.

Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization.

Cazzaniga P, Nobile MS, Besozzi D, Bellini M, Mauri G.

Biomed Res Int. 2014;2014:863298. doi: 10.1155/2014/863298. Epub 2014 Jun 16.

PMID:
25025072
[PubMed - in process]
Free PMC Article
2.

cuTauLeaping: a GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems.

Nobile MS, Cazzaniga P, Besozzi D, Pescini D, Mauri G.

PLoS One. 2014 Mar 24;9(3):e91963. doi: 10.1371/journal.pone.0091963. eCollection 2014.

PMID:
24663957
[PubMed - in process]
Free PMC Article
3.

In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae.

Amara F, Colombo R, Cazzaniga P, Pescini D, Csikász-Nagy A, Falconi MM, Besozzi D, Plevani P.

BMC Syst Biol. 2013 Mar 20;7:24. doi: 10.1186/1752-0509-7-24.

PMID:
23514624
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The role of feedback control mechanisms on the establishment of oscillatory regimes in the Ras/cAMP/PKA pathway in S. cerevisiae.

Besozzi D, Cazzaniga P, Pescini D, Mauri G, Colombo S, Martegani E.

EURASIP J Bioinform Syst Biol. 2012 Jul 20;2012(1):10. doi: 10.1186/1687-4153-2012-10.

PMID:
22818197
[PubMed]
Free PMC Article
5.

Simulation of the Ras/cAMP/PKA pathway in budding yeast highlights the establishment of stable oscillatory states.

Pescini D, Cazzaniga P, Besozzi D, Mauri G, Amigoni L, Colombo S, Martegani E.

Biotechnol Adv. 2012 Jan-Feb;30(1):99-107. doi: 10.1016/j.biotechadv.2011.06.014. Epub 2011 Jun 29.

PMID:
21741466
[PubMed - indexed for MEDLINE]
6.

Modeling and stochastic simulation of the Ras/cAMP/PKA pathway in the yeast Saccharomyces cerevisiae evidences a key regulatory function for intracellular guanine nucleotides pools.

Cazzaniga P, Pescini D, Besozzi D, Mauri G, Colombo S, Martegani E.

J Biotechnol. 2008 Feb 1;133(3):377-85. Epub 2007 Oct 11.

PMID:
18023904
[PubMed - indexed for MEDLINE]
7.

Modelling metapopulations with stochastic membrane systems.

Besozzi D, Cazzaniga P, Pescini D, Mauri G.

Biosystems. 2008 Mar;91(3):499-514. Epub 2007 Aug 11. Review.

PMID:
17904729
[PubMed - indexed for MEDLINE]
8.

P systems with deadlock.

Besozzi D, Ferretti C, Mauri G, Zandron C.

Biosystems. 2003 Jul;70(2):95-105.

PMID:
12915268
[PubMed - indexed for MEDLINE]

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