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Results: 1 to 20 of 21

1.

A Model for Genome Size Evolution.

Fischer S, Bernard S, Beslon G, Knibbe C.

Bull Math Biol. 2014 Aug 21. [Epub ahead of print]

PMID:
25142746
[PubMed - as supplied by publisher]
2.

Reply to the comment by V. P. Shkilev on "anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium".

Soula H, Caré B, Beslon G, Berry H.

Biophys J. 2014 Jun 3;106(11):2544-6. doi: 10.1016/j.bpj.2014.03.052. No abstract available.

PMID:
24896135
[PubMed - in process]
3.

In silico experimental evolution: a tool to test evolutionary scenarios.

Batut B, Parsons DP, Fischer S, Beslon G, Knibbe C.

BMC Bioinformatics. 2013;14 Suppl 15:S11. doi: 10.1186/1471-2105-14-S15-S11. Epub 2013 Oct 15.

PMID:
24564457
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium.

Soula H, Caré B, Beslon G, Berry H.

Biophys J. 2013 Nov 5;105(9):2064-73. doi: 10.1016/j.bpj.2013.07.023.

PMID:
24209851
[PubMed - indexed for MEDLINE]
5.

Quantifying the contribution of chromatin dynamics to stochastic gene expression reveals long, locus-dependent periods between transcriptional bursts.

Viñuelas J, Kaneko G, Coulon A, Vallin E, Morin V, Mejia-Pous C, Kupiec JJ, Beslon G, Gandrillon O.

BMC Biol. 2013 Feb 25;11:15. doi: 10.1186/1741-7007-11-15.

PMID:
23442824
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Chance at the heart of the cell.

Gandrillon O, Kolesnik-Antoine D, Kupiec JJ, Beslon G.

Prog Biophys Mol Biol. 2012 Sep;110(1):1-4. doi: 10.1016/j.pbiomolbio.2012.05.006. Epub 2012 May 30. No abstract available.

PMID:
22682931
[PubMed - indexed for MEDLINE]
7.

Towards experimental manipulation of stochasticity in gene expression.

Viñuelas J, Kaneko G, Coulon A, Beslon G, Gandrillon O.

Prog Biophys Mol Biol. 2012 Sep;110(1):44-53. doi: 10.1016/j.pbiomolbio.2012.04.010. Epub 2012 May 16.

PMID:
22609563
[PubMed - indexed for MEDLINE]
8.

Membrane microdomains emergence through non-homogeneous diffusion.

Soula HA, Coulon A, Beslon G.

BMC Biophys. 2012 Apr 30;5:6. doi: 10.1186/2046-1682-5-6.

PMID:
22546236
[PubMed]
Free PMC Article
9.

New insights into bacterial adaptation through in vivo and in silico experimental evolution.

Hindré T, Knibbe C, Beslon G, Schneider D.

Nat Rev Microbiol. 2012 Mar 27;10(5):352-65. doi: 10.1038/nrmicro2750. Review.

PMID:
22450379
[PubMed - indexed for MEDLINE]
10.

Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.

Norris V, Zemirline A, Amar P, Audinot JN, Ballet P, Ben-Jacob E, Bernot G, Beslon G, Cabin A, Fanchon E, Giavitto JL, Glade N, Greussay P, Grondin Y, Foster JA, Hutzler G, Jost J, Kepes F, Michel O, Molina F, Signorini J, Stano P, Thierry AR.

Theory Biosci. 2011 Sep;130(3):211-28. doi: 10.1007/s12064-010-0118-4. Epub 2011 Mar 8. Review.

PMID:
21384168
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Enhanced stimulus encoding capabilities with spectral selectivity in inhibitory circuits by STDP.

Coulon A, Beslon G, Soula HA.

Neural Comput. 2011 Apr;23(4):882-908. doi: 10.1162/NECO_a_00100. Epub 2011 Jan 11.

PMID:
21222530
[PubMed - indexed for MEDLINE]
12.

Scaling laws in bacterial genomes: a side-effect of selection of mutational robustness?

Beslon G, Parsons DP, Sanchez-Dehesa Y, Peña JM, Knibbe C.

Biosystems. 2010 Oct;102(1):32-40. doi: 10.1016/j.biosystems.2010.07.009. Epub 2010 Jul 23.

PMID:
20655979
[PubMed - indexed for MEDLINE]
13.

On the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter.

Coulon A, Gandrillon O, Beslon G.

BMC Syst Biol. 2010 Jan 8;4:2. doi: 10.1186/1752-0509-4-2.

PMID:
20064204
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Large multiprotein structures modeling and simulation: the need for mesoscopic models.

Coulon A, Beslon G, Gandrillon O.

Methods Mol Biol. 2008;484:537-58. doi: 10.1007/978-1-59745-398-1_32.

PMID:
18592200
[PubMed - indexed for MEDLINE]
15.

The topology of the protein network influences the dynamics of gene order: from systems biology to a systemic understanding of evolution.

Knibbe C, Fayard JM, Beslon G.

Artif Life. 2008 Winter;14(1):149-56. doi: 10.1162/artl.2008.14.1.149.

PMID:
18171137
[PubMed - indexed for MEDLINE]
16.

A long-term evolutionary pressure on the amount of noncoding DNA.

Knibbe C, Coulon A, Mazet O, Fayard JM, Beslon G.

Mol Biol Evol. 2007 Oct;24(10):2344-53. Epub 2007 Aug 19.

PMID:
17709335
[PubMed - indexed for MEDLINE]
Free Article
17.

Evolutionary coupling between the deleteriousness of gene mutations and the amount of non-coding sequences.

Knibbe C, Mazet O, Chaudier F, Fayard JM, Beslon G.

J Theor Biol. 2007 Feb 21;244(4):621-30. Epub 2006 Sep 12.

PMID:
17055537
[PubMed - indexed for MEDLINE]
18.

Guidelines: From artificial evolution to computational evolution: a research agenda.

Banzhaf W, Beslon G, Christensen S, Foster JA, Képès F, Lefort V, Miller JF, Radman M, Ramsden JJ.

Nat Rev Genet. 2006 Sep;7(9):729-35. Epub 2006 Aug 8.

PMID:
16894364
[PubMed - indexed for MEDLINE]
19.

Spontaneous dynamics of asymmetric random recurrent spiking neural networks.

Soula H, Beslon G, Mazet O.

Neural Comput. 2006 Jan;18(1):60-79.

PMID:
16354381
[PubMed - indexed for MEDLINE]
20.

Modeling the emergence of multi-protein dynamic structures by principles of self-organization through the use of 3DSpi, a multi-agent-based software.

Soula H, Robardet C, Perrin F, Gripon S, Beslon G, Gandrillon O.

BMC Bioinformatics. 2005 Sep 19;6:228.

PMID:
16171521
[PubMed - indexed for MEDLINE]
Free PMC Article

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