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Items: 1 to 20 of 26

1.

Defining and simulating open-ended novelty: requirements, guidelines, and challenges.

Banzhaf W, Baumgaertner B, Beslon G, Doursat R, Foster JA, McMullin B, de Melo VV, Miconi T, Spector L, Stepney S, White R.

Theory Biosci. 2016 May 19. [Epub ahead of print]

PMID:
27194550
2.

Erratum to: Temperature-induced variation in gene expression burst size in metazoan cells.

Arnaud O, Meyer S, Vallin E, Beslon G, Gandrillon O.

BMC Mol Biol. 2016 Feb 3;17:2. doi: 10.1186/s12867-015-0054-4. No abstract available.

3.

Temperature-induced variation in gene expression burst size in metazoan cells.

Arnaud O, Meyer S, Vallin E, Beslon G, Gandrillon O.

BMC Mol Biol. 2015 Nov 25;16:20. doi: 10.1186/s12867-015-0048-2. Erratum in: BMC Mol Biol. 2016;17:2.

4.

Stochastic fluctuations and distributed control of gene expression impact cellular memory.

Corre G, Stockholm D, Arnaud O, Kaneko G, Viñuelas J, Yamagata Y, Neildez-Nguyen TM, Kupiec JJ, Beslon G, Gandrillon O, Paldi A.

PLoS One. 2014 Dec 22;9(12):e115574. doi: 10.1371/journal.pone.0115574. eCollection 2014.

5.

Torsion-mediated interaction between adjacent genes.

Meyer S, Beslon G.

PLoS Comput Biol. 2014 Sep 4;10(9):e1003785. doi: 10.1371/journal.pcbi.1003785. eCollection 2014 Sep.

6.

A model for genome size evolution.

Fischer S, Bernard S, Beslon G, Knibbe C.

Bull Math Biol. 2014 Sep;76(9):2249-91. doi: 10.1007/s11538-014-9997-8. Epub 2014 Aug 21.

7.

Reply to the comment by V. P. Shkilev on "anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium".

Soula H, Caré B, Beslon G, Berry H.

Biophys J. 2014 Jun 3;106(11):2544-6. doi: 10.1016/j.bpj.2014.03.052. No abstract available.

8.

In silico experimental evolution: a tool to test evolutionary scenarios.

Batut B, Parsons DP, Fischer S, Beslon G, Knibbe C.

BMC Bioinformatics. 2013;14 Suppl 15:S11. doi: 10.1186/1471-2105-14-S15-S11. Epub 2013 Oct 15.

9.

Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium.

Soula H, Caré B, Beslon G, Berry H.

Biophys J. 2013 Nov 5;105(9):2064-73. doi: 10.1016/j.bpj.2013.07.023.

10.

Quantifying the contribution of chromatin dynamics to stochastic gene expression reveals long, locus-dependent periods between transcriptional bursts.

Viñuelas J, Kaneko G, Coulon A, Vallin E, Morin V, Mejia-Pous C, Kupiec JJ, Beslon G, Gandrillon O.

BMC Biol. 2013 Feb 25;11:15. doi: 10.1186/1741-7007-11-15.

11.

Chance at the heart of the cell.

Gandrillon O, Kolesnik-Antoine D, Kupiec JJ, Beslon G.

Prog Biophys Mol Biol. 2012 Sep;110(1):1-4. doi: 10.1016/j.pbiomolbio.2012.05.006. Epub 2012 May 30. No abstract available.

PMID:
22682931
12.

Towards experimental manipulation of stochasticity in gene expression.

Viñuelas J, Kaneko G, Coulon A, Beslon G, Gandrillon O.

Prog Biophys Mol Biol. 2012 Sep;110(1):44-53. doi: 10.1016/j.pbiomolbio.2012.04.010. Epub 2012 May 16.

PMID:
22609563
13.

Membrane microdomains emergence through non-homogeneous diffusion.

Soula HA, Coulon A, Beslon G.

BMC Biophys. 2012 Apr 30;5:6. doi: 10.1186/2046-1682-5-6.

14.

New insights into bacterial adaptation through in vivo and in silico experimental evolution.

Hindré T, Knibbe C, Beslon G, Schneider D.

Nat Rev Microbiol. 2012 Mar 27;10(5):352-65. doi: 10.1038/nrmicro2750. Review.

PMID:
22450379
15.

Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.

Norris V, Zemirline A, Amar P, Audinot JN, Ballet P, Ben-Jacob E, Bernot G, Beslon G, Cabin A, Fanchon E, Giavitto JL, Glade N, Greussay P, Grondin Y, Foster JA, Hutzler G, Jost J, Kepes F, Michel O, Molina F, Signorini J, Stano P, Thierry AR.

Theory Biosci. 2011 Sep;130(3):211-28. doi: 10.1007/s12064-010-0118-4. Epub 2011 Mar 8. Review.

16.

Enhanced stimulus encoding capabilities with spectral selectivity in inhibitory circuits by STDP.

Coulon A, Beslon G, Soula HA.

Neural Comput. 2011 Apr;23(4):882-908. doi: 10.1162/NECO_a_00100. Epub 2011 Jan 11.

PMID:
21222530
17.

Scaling laws in bacterial genomes: a side-effect of selection of mutational robustness?

Beslon G, Parsons DP, Sanchez-Dehesa Y, Peña JM, Knibbe C.

Biosystems. 2010 Oct;102(1):32-40. doi: 10.1016/j.biosystems.2010.07.009. Epub 2010 Jul 23.

PMID:
20655979
18.

On the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter.

Coulon A, Gandrillon O, Beslon G.

BMC Syst Biol. 2010 Jan 8;4:2. doi: 10.1186/1752-0509-4-2.

19.

Large multiprotein structures modeling and simulation: the need for mesoscopic models.

Coulon A, Beslon G, Gandrillon O.

Methods Mol Biol. 2008;484:537-58. doi: 10.1007/978-1-59745-398-1_32.

PMID:
18592200
20.

The topology of the protein network influences the dynamics of gene order: from systems biology to a systemic understanding of evolution.

Knibbe C, Fayard JM, Beslon G.

Artif Life. 2008 Winter;14(1):149-56. doi: 10.1162/artl.2008.14.1.149.

PMID:
18171137
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