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Results: 13

1.

Inferring ancient metabolism using ancestral core metabolic models of enterobacteria.

Baumler DJ, Ma B, Reed JL, Perna NT.

BMC Syst Biol. 2013 Jun 11;7:46. doi: 10.1186/1752-0509-7-46.

PMID:
23758866
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Using comparative genomics for inquiry-based learning to dissect virulence of Escherichia coli O157:H7 and Yersinia pestis.

Baumler DJ, Banta LM, Hung KF, Schwarz JA, Cabot EL, Glasner JD, Perna NT.

CBE Life Sci Educ. 2012 Spring;11(1):81-93. doi: 10.1187/cbe.10-04-0057.

PMID:
22383620
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The evolution of metabolic networks of E. coli.

Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT.

BMC Syst Biol. 2011 Nov 1;5:182. doi: 10.1186/1752-0509-5-182.

PMID:
22044664
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Reduction of Escherichia coli O157:H7 shedding in cattle by addition of chitosan microparticles to feed.

Jeong KC, Kang MY, Kang J, Baumler DJ, Kaspar CW.

Appl Environ Microbiol. 2011 Apr;77(8):2611-6. doi: 10.1128/AEM.02587-10. Epub 2011 Feb 18.

PMID:
21335379
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Molybdate treatment and sulfate starvation decrease ATP and DNA levels in Ferroplasma acidarmanu.

Baumler DJ, Hung KF, Jeong KC, Kaspar CW.

Archaea. 2008 Dec;2(3):205-9.

PMID:
19054747
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Acid stress damage of DNA is prevented by Dps binding in Escherichia coli O157:H7.

Jeong KC, Hung KF, Baumler DJ, Byrd JJ, Kaspar CW.

BMC Microbiol. 2008 Oct 15;8:181. doi: 10.1186/1471-2180-8-181.

PMID:
18922164
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria.

Glasner JD, Plunkett G 3rd, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, Fedorko J, Hampton T, Liss P, Rusch M, Shaker M, Shaull L, Shetty P, Thotakura S, Whitmore J, Blattner FR, Greene JM, Perna NT.

Nucleic Acids Res. 2008 Jan;36(Database issue):D519-23. Epub 2007 Nov 13.

PMID:
17999997
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Production of methanethiol and volatile sulfur compounds by the archaeon "Ferroplasma acidarmanus".

Baumler DJ, Hung KF, Jeong KC, Kaspar CW.

Extremophiles. 2007 Nov;11(6):841-51. Epub 2007 Oct 4.

PMID:
17914603
[PubMed - indexed for MEDLINE]
9.

H-NS controls metabolism and stress tolerance in Escherichia coli O157:H7 that influence mouse passage.

Erol I, Jeong KC, Baumler DJ, Vykhodets B, Choi SH, Kaspar CW.

BMC Microbiol. 2006 Aug 15;6:72.

PMID:
16911800
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Enhancement of acid tolerance in Zymomonas mobilis by a proton-buffering peptide.

Baumler DJ, Hung KF, Bose JL, Vykhodets BM, Cheng CM, Jeong KC, Kaspar CW.

Appl Biochem Biotechnol. 2006 Jul;134(1):15-26.

PMID:
16891663
[PubMed - indexed for MEDLINE]
11.

dps expression in Escherichia coli O157:H7 requires an extended -10 region and is affected by the cAMP receptor protein.

Jeong KC, Baumler DJ, Kaspar CW.

Biochim Biophys Acta. 2006 Jan-Feb;1759(1-2):51-9. Epub 2006 Mar 9.

PMID:
16574257
[PubMed - indexed for MEDLINE]
12.

Sulfate requirement for heterotrophic growth of "Ferroplasma acidarmanus" strain fer1.

Baumler DJ, Jeong KC, Fox BG, Banfield JF, Kaspar CW.

Res Microbiol. 2005 May;156(4):492-8. Epub 2005 Feb 19.

PMID:
15862447
[PubMed - indexed for MEDLINE]
13.

Contribution of dps to acid stress tolerance and oxidative stress tolerance in Escherichia coli O157:H7.

Choi SH, Baumler DJ, Kaspar CW.

Appl Environ Microbiol. 2000 Sep;66(9):3911-6.

PMID:
10966408
[PubMed - indexed for MEDLINE]
Free PMC Article

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