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Results: 1 to 20 of 135

1.

Exhaled breath analysis for lung cancer detection using ion mobility spectrometry.

Handa H, Usuba A, Maddula S, Baumbach JI, Mineshita M, Miyazawa T.

PLoS One. 2014 Dec 9;9(12):e114555. doi: 10.1371/journal.pone.0114555. eCollection 2014.

PMID:
25490772
[PubMed - in process]
Free PMC Article
2.

Review on Ion Mobility Spectrometry. Part 2: hyphenated methods and effects of experimental parameters.

Cumeras R, Figueras E, Davis CE, Baumbach JI, Gràcia I.

Analyst. 2015 Feb 16;140(5):1391-410. doi: 10.1039/c4an01101e.

PMID:
25465248
[PubMed - in process]
3.

Review on Ion Mobility Spectrometry. Part 1: current instrumentation.

Cumeras R, Figueras E, Davis CE, Baumbach JI, Gràcia I.

Analyst. 2015 Feb 16;140(5):1376-90. doi: 10.1039/c4an01100g.

PMID:
25465076
[PubMed - in process]
4.

Massive fungal biodiversity data re-annotation with multi-level clustering.

Vu D, Szöke S, Wiwie C, Baumbach J, Cardinali G, Röttger R, Robert V.

Sci Rep. 2014 Oct 30;4:6837. doi: 10.1038/srep06837.

PMID:
25355642
[PubMed - in process]
Free PMC Article
5.

Computational Integrative Biology--on the joint analysis of diverse biological data sets.

Baumbach J, Röttger R.

Integr Biol (Camb). 2014 Nov;6(11):1008-9. doi: 10.1039/c4ib90037e. No abstract available.

PMID:
25298207
[PubMed - in process]
6.

Volatile Organic Compounds during Inflammation and Sepsis in Rats: A Potential Breath Test Using Ion-mobility Spectrometry.

Fink T, Wolf A, Maurer F, Albrecht FW, Heim N, Wolf B, Hauschild AC, Bödeker B, Baumbach JI, Volk T, Sessler DI, Kreuer S.

Anesthesiology. 2015 Jan;122(1):117-26. doi: 10.1097/ALN.0000000000000420.

PMID:
25170570
[PubMed - in process]
7.

Microarray R-based analysis of complex lysate experiments with MIRACLE.

List M, Block I, Pedersen ML, Christiansen H, Schmidt S, Thomassen M, Tan Q, Baumbach J, Mollenhauer J.

Bioinformatics. 2014 Sep 1;30(17):i631-8. doi: 10.1093/bioinformatics/btu473.

PMID:
25161257
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape.

Alcaraz N, Pauling J, Batra R, Barbosa E, Junge A, Christensen AG, Azevedo V, Ditzel HJ, Baumbach J.

BMC Syst Biol. 2014 Aug 19;8:99. doi: 10.1186/s12918-014-0099-x.

PMID:
25134827
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis.

Pauling JK, Christensen AG, Batra R, Alcaraz N, Barbosa E, Larsen MR, Beck HC, Leth-Larsen R, Azevedo V, Ditzel HJ, Baumbach J.

Integr Biol (Camb). 2014 Nov;6(11):1058-68. doi: 10.1039/c4ib00137k.

PMID:
25124678
[PubMed - in process]
10.

BacillusRegNet: a transcriptional regulation database and analysis platform for Bacillus species.

Misirli G, Hallinan J, Röttger R, Baumbach J, Wipat A.

J Integr Bioinform. 2014 Jul 8;11(2):244. doi: 10.2390/biecoll-jib-2014-244.

PMID:
25001169
[PubMed - in process]
11.

Two different approaches for pharmacokinetic modeling of exhaled drug concentrations.

Kreuer S, Hauschild A, Fink T, Baumbach JI, Maddula S, Volk T.

Sci Rep. 2014 Jun 24;4:5423. doi: 10.1038/srep05423.

PMID:
24957852
[PubMed - in process]
Free PMC Article
12.

Classification of breast cancer subtypes by combining gene expression and DNA methylation data.

List M, Hauschild AC, Tan Q, Kruse TA, Mollenhauer J, Baumbach J, Batra R.

J Integr Bioinform. 2014 Jun 13;11(2):236. doi: 10.2390/biecoll-jib-2014-236.

PMID:
24953305
[PubMed - in process]
13.

Value of a newly sequenced bacterial genome.

Barbosa EG, Aburjaile FF, Ramos RT, Carneiro AR, Le Loir Y, Baumbach J, Miyoshi A, Silva A, Azevedo V.

World J Biol Chem. 2014 May 26;5(2):161-8. doi: 10.4331/wjbc.v5.i2.161. Review.

PMID:
24921006
[PubMed]
Free PMC Article
14.

Gαq, Gγ1 and Plc21C control Drosophila body fat storage.

Baumbach J, Xu Y, Hehlert P, Kühnlein RP.

J Genet Genomics. 2014 May 20;41(5):283-92. doi: 10.1016/j.jgg.2014.03.005. Epub 2014 Mar 27.

PMID:
24894355
[PubMed - in process]
Free Article
15.

On the limits of computational functional genomics for bacterial lifestyle prediction.

Barbosa E, Röttger R, Hauschild AC, Azevedo V, Baumbach J.

Brief Funct Genomics. 2014 Sep;13(5):398-408. doi: 10.1093/bfgp/elu014. Epub 2014 May 22.

PMID:
24855068
[PubMed - in process]
16.

Wash-out of ambient air contaminations for breath measurements.

Maurer F, Wolf A, Fink T, Rittershofer B, Heim N, Volk T, Baumbach JI, Kreuer S.

J Breath Res. 2014 Jun;8(2):027107. doi: 10.1088/1752-7155/8/2/027107. Epub 2014 May 19.

PMID:
24837657
[PubMed - indexed for MEDLINE]
17.

Current breathomics--a review on data pre-processing techniques and machine learning in metabolomics breath analysis.

Smolinska A, Hauschild AC, Fijten RR, Dallinga JW, Baumbach J, van Schooten FJ.

J Breath Res. 2014 Jun;8(2):027105. doi: 10.1088/1752-7155/8/2/027105. Epub 2014 Apr 8. Review.

PMID:
24713999
[PubMed - indexed for MEDLINE]
18.

Bi-Force: large-scale bicluster editing and its application to gene expression data biclustering.

Sun P, Speicher NK, Röttger R, Guo J, Baumbach J.

Nucleic Acids Res. 2014 May;42(9):e78. doi: 10.1093/nar/gku201. Epub 2014 Mar 20.

PMID:
24682815
[PubMed - indexed for MEDLINE]
Free Article
19.

Ion mobility spectrometry in breath research.

Fink T, Baumbach JI, Kreuer S.

J Breath Res. 2014 Jun;8(2):027104. doi: 10.1088/1752-7155/8/2/027104. Epub 2014 Mar 28. Review.

PMID:
24682214
[PubMed - indexed for MEDLINE]
20.

The centrosome-specific phosphorylation of Cnn by Polo/Plk1 drives Cnn scaffold assembly and centrosome maturation.

Conduit PT, Feng Z, Richens JH, Baumbach J, Wainman A, Bakshi SD, Dobbelaere J, Johnson S, Lea SM, Raff JW.

Dev Cell. 2014 Mar 31;28(6):659-69. doi: 10.1016/j.devcel.2014.02.013. Epub 2014 Mar 20.

PMID:
24656740
[PubMed - indexed for MEDLINE]
Free PMC Article
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