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Results: 15

1.

The maternal transcriptome of the crustacean Parhyale hawaiensis is inherited asymmetrically to invariant cell lineages of the ectoderm and mesoderm.

Nestorov P, Battke F, Levesque MP, Gerberding M.

PLoS One. 2013;8(2):e56049. doi: 10.1371/journal.pone.0056049. Epub 2013 Feb 13.

2.

REVEAL--visual eQTL analytics.

Jäger G, Battke F, Nieselt K.

Bioinformatics. 2012 Sep 15;28(18):i542-i548. doi: 10.1093/bioinformatics/bts382.

3.

Detection of viable Mycobacterium ulcerans in clinical samples by a novel combined 16S rRNA reverse transcriptase/IS2404 real-time qPCR assay.

Beissner M, Symank D, Phillips RO, Amoako YA, Awua-Boateng NY, Sarfo FS, Jansson M, Huber KL, Herbinger KH, Battke F, Löscher T, Adjei O, Bretzel G.

PLoS Negl Trop Dis. 2012;6(8):e1756. doi: 10.1371/journal.pntd.0001756. Epub 2012 Aug 28. No abstract available.

4.

GenomeRing: alignment visualization based on SuperGenome coordinates.

Herbig A, Jäger G, Battke F, Nieselt K.

Bioinformatics. 2012 Jun 15;28(12):i7-15. doi: 10.1093/bioinformatics/bts217.

5.

An eQTL biological data visualization challenge and approaches from the visualization community.

Bartlett CW, Cheong SY, Hou L, Paquette J, Lum PY, Jäger G, Battke F, Vehlow C, Heinrich J, Nieselt K, Sakai R, Aerts J, Ray WC.

BMC Bioinformatics. 2012;13 Suppl 8:S8. doi: 10.1186/1471-2105-13-S8-S8. Epub 2012 May 18.

6.

iHAT: interactive hierarchical aggregation table for genetic association data.

Heinrich J, Vehlow C, Battke F, Jäger G, Weiskopf D, Nieselt K.

BMC Bioinformatics. 2012;13 Suppl 8:S2. doi: 10.1186/1471-2105-13-S8-S2. Epub 2012 May 18.

7.

The PII protein GlnK is a pleiotropic regulator for morphological differentiation and secondary metabolism in Streptomyces coelicolor.

Waldvogel E, Herbig A, Battke F, Amin R, Nentwich M, Nieselt K, Ellingsen TE, Wentzel A, Hodgson DA, Wohlleben W, Mast Y.

Appl Microbiol Biotechnol. 2011 Dec;92(6):1219-36. doi: 10.1007/s00253-011-3644-1. Epub 2011 Oct 28.

PMID:
22033567
8.

Identifying associations between amino acid changes and meta information in alignments.

Spangenberg L, Battke F, Graña M, Nieselt K, Naya H.

Bioinformatics. 2011 Oct 15;27(20):2782-9. doi: 10.1093/bioinformatics/btr476. Epub 2011 Aug 16.

9.

GaggleBridge: collaborative data analysis.

Battke F, Symons S, Herbig A, Nieselt K.

Bioinformatics. 2011 Sep 15;27(18):2612-3. doi: 10.1093/bioinformatics/btr429. Epub 2011 Jul 19.

10.

A technical platform for generating reproducible expression data from Streptomyces coelicolor batch cultivations.

Battke F, Herbig A, Wentzel A, Jakobsen OM, Bonin M, Hodgson DA, Wohlleben W, Ellingsen TE; STREAM Consortium, Nieselt K.

Adv Exp Med Biol. 2011;696:3-15. doi: 10.1007/978-1-4419-7046-6_1.

PMID:
21431541
11.

Mayday SeaSight: combined analysis of deep sequencing and microarray data.

Battke F, Nieselt K.

PLoS One. 2011 Jan 31;6(1):e16345. doi: 10.1371/journal.pone.0016345.

12.

Integrative systems biology visualization with MAYDAY.

Symons S, Zipplies C, Battke F, Nieselt K.

J Integr Bioinform. 2010 Mar 25;7(3). doi: 10.2390/biecoll-jib-2010-115.

PMID:
20375461
13.

Mayday--integrative analytics for expression data.

Battke F, Symons S, Nieselt K.

BMC Bioinformatics. 2010 Mar 9;11:121. doi: 10.1186/1471-2105-11-121.

14.

The dynamic architecture of the metabolic switch in Streptomyces coelicolor.

Nieselt K, Battke F, Herbig A, Bruheim P, Wentzel A, Jakobsen ØM, Sletta H, Alam MT, Merlo ME, Moore J, Omara WA, Morrissey ER, Juarez-Hermosillo MA, Rodríguez-García A, Nentwich M, Thomas L, Iqbal M, Legaie R, Gaze WH, Challis GL, Jansen RC, Dijkhuizen L, Rand DA, Wild DL, Bonin M, Reuther J, Wohlleben W, Smith MC, Burroughs NJ, Martín JF, Hodgson DA, Takano E, Breitling R, Ellingsen TE, Wellington EM.

BMC Genomics. 2010 Jan 6;11:10. doi: 10.1186/1471-2164-11-10.

15.

Palladium exposure of barley: uptake and effects.

Battke F, Leopold K, Maier M, Schmidhalter U, Schuster M.

Plant Biol (Stuttg). 2008 Mar;10(2):272-6. doi: 10.1111/j.1438-8677.2007.00017.x. Erratum in: Plant Biol (Stuttg). 2008 May;10(3):413.

PMID:
18304202
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