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Results: 1 to 20 of 121

1.

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A.

Mol Ecol Resour. 2015 May 6. doi: 10.1111/1755-0998.12425. [Epub ahead of print]

PMID:
25944057
2.

Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii.

Loux V, Mariadassou M, Almeida S, Chiapello H, Hammani A, Buratti J, Gendrault A, Barbe V, Aury JM, Deutsch SM, Parayre S, Madec MN, Chuat V, Jan G, Peterlongo P, Azevedo V, Le Loir Y, Falentin H.

BMC Genomics. 2015 Apr 15;16(1):296. doi: 10.1186/s12864-015-1467-7.

3.

Draft Genome Sequence of Xanthomonas sacchari Strain LMG 476.

Pieretti I, Bolot S, Carrère S, Barbe V, Cociancich S, Rott P, Royer M.

Genome Announc. 2015 Mar 19;3(2). pii: e00146-15. doi: 10.1128/genomeA.00146-15.

4.

Two host clades, two bacterial arsenals: evolution through gene losses in facultative endosymbionts.

Rollat-Farnier PA, Santos-Garcia D, Rao Q, Sagot MF, Silva FJ, Henri H, Zchori-Fein E, Latorre A, Moya A, Barbe V, Liu SS, Wang XW, Vavre F, Mouton L.

Genome Biol Evol. 2015 Feb 20;7(3):839-55. doi: 10.1093/gbe/evv030.

5.

Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi.

Fontanillas E, Hood ME, Badouin H, Petit E, Barbe V, Gouzy J, de Vienne DM, Aguileta G, Poulain J, Wincker P, Chen Z, Toh SS, Cuomo CA, Perlin MH, Gladieux P, Giraud T.

Mol Biol Evol. 2015 Apr;32(4):928-43. doi: 10.1093/molbev/msu396. Epub 2014 Dec 21.

6.

Draft Genome Sequence of Propane- and Butane-Oxidizing Actinobacterium Rhodococcus ruber IEGM 231.

Ivshina IB, Kuyukina MS, Krivoruchko AV, Barbe V, Fischer C.

Genome Announc. 2014 Dec 11;2(6). pii: e01297-14. doi: 10.1128/genomeA.01297-14.

7.

Organization and evolution of transposable elements along the bread wheat chromosome 3B.

Daron J, Glover N, Pingault L, Theil S, Jamilloux V, Paux E, Barbe V, Mangenot S, Alberti A, Wincker P, Quesneville H, Feuillet C, Choulet F.

Genome Biol. 2014;15(12):546.

8.

Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens.

Grandaubert J, Lowe RG, Soyer JL, Schoch CL, Van de Wouw AP, Fudal I, Robbertse B, Lapalu N, Links MG, Ollivier B, Linglin J, Barbe V, Mangenot S, Cruaud C, Borhan H, Howlett BJ, Balesdent MH, Rouxel T.

BMC Genomics. 2014 Oct 12;15:891. doi: 10.1186/1471-2164-15-891.

9.

Insights into the pathways of iron- and sulfur-oxidation, and biofilm formation from the chemolithotrophic acidophile Acidithiobacillus ferrivorans CF27.

Talla E, Hedrich S, Mangenot S, Ji B, Johnson DB, Barbe V, Bonnefoy V.

Res Microbiol. 2014 Nov;165(9):753-60. doi: 10.1016/j.resmic.2014.08.002. Epub 2014 Aug 19.

PMID:
25154051
10.

Characterization of a P1-like bacteriophage carrying an SHV-2 extended-spectrum β-lactamase from an Escherichia coli strain.

Billard-Pomares T, Fouteau S, Jacquet ME, Roche D, Barbe V, Castellanos M, Bouet JY, Cruveiller S, Médigue C, Blanco J, Clermont O, Denamur E, Branger C.

Antimicrob Agents Chemother. 2014 Nov;58(11):6550-7. doi: 10.1128/AAC.03183-14. Epub 2014 Aug 18.

11.

Structural and functional partitioning of bread wheat chromosome 3B.

Choulet F, Alberti A, Theil S, Glover N, Barbe V, Daron J, Pingault L, Sourdille P, Couloux A, Paux E, Leroy P, Mangenot S, Guilhot N, Le Gouis J, Balfourier F, Alaux M, Jamilloux V, Poulain J, Durand C, Bellec A, Gaspin C, Safar J, Dolezel J, Rogers J, Vandepoele K, Aury JM, Mayer K, Berges H, Quesneville H, Wincker P, Feuillet C.

Science. 2014 Jul 18;345(6194):1249721. doi: 10.1126/science.1249721.

PMID:
25035497
12.

The complete mitochondrial genome of Acanthastrea maxima (Cnidaria, Scleractinia, Lobophylliidae).

Arrigoni R, Vacherie B, Benzoni F, Barbe V.

Mitochondrial DNA. 2014 Jun 18:1-2. [Epub ahead of print]

PMID:
24938099
13.

Comparative analysis of Klebsiella pneumoniae genomes identifies a phospholipase D family protein as a novel virulence factor.

Lery LM, Frangeul L, Tomas A, Passet V, Almeida AS, Bialek-Davenet S, Barbe V, Bengoechea JA, Sansonetti P, Brisse S, Tournebize R.

BMC Biol. 2014 May 29;12:41. doi: 10.1186/1741-7007-12-41.

14.

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest.

Kunze G, Gaillardin C, Czernicka M, Durrens P, Martin T, Böer E, Gabaldón T, Cruz JA, Talla E, Marck C, Goffeau A, Barbe V, Baret P, Baronian K, Beier S, Bleykasten C, Bode R, Casaregola S, Despons L, Fairhead C, Giersberg M, Gierski PP, Hähnel U, Hartmann A, Jankowska D, Jubin C, Jung P, Lafontaine I, Leh-Louis V, Lemaire M, Marcet-Houben M, Mascher M, Morel G, Richard GF, Riechen J, Sacerdot C, Sarkar A, Savel G, Schacherer J, Sherman DJ, Stein N, Straub ML, Thierry A, Trautwein-Schult A, Vacherie B, Westhof E, Worch S, Dujon B, Souciet JL, Wincker P, Scholz U, Neuvéglise C.

Biotechnol Biofuels. 2014 Apr 24;7:66. doi: 10.1186/1754-6834-7-66. eCollection 2014.

15.

Genome Sequence of Luminous Piezophile Photobacterium phosphoreum ANT-2200.

Zhang SD, Barbe V, Garel M, Zhang WJ, Chen H, Santini CL, Murat D, Jing H, Zhao Y, Lajus A, Martini S, Pradel N, Tamburini C, Wu LF.

Genome Announc. 2014 Apr 17;2(2). pii: e00096-14. doi: 10.1128/genomeA.00096-14.

16.

Population genomics supports baculoviruses as vectors of horizontal transfer of insect transposons.

Gilbert C, Chateigner A, Ernenwein L, Barbe V, Bézier A, Herniou EA, Cordaux R.

Nat Commun. 2014;5:3348. doi: 10.1038/ncomms4348.

17.

Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).

Morales L, Noel B, Porcel B, Marcet-Houben M, Hullo MF, Sacerdot C, Tekaia F, Leh-Louis V, Despons L, Khanna V, Aury JM, Barbe V, Couloux A, Labadie K, Pelletier E, Souciet JL, Boekhout T, Gabaldon T, Wincker P, Dujon B.

Genome Biol Evol. 2013;5(12):2524-39. doi: 10.1093/gbe/evt201.

18.

Fuse or die: how to survive the loss of Dam in Vibrio cholerae.

Val ME, Kennedy SP, Soler-Bistué AJ, Barbe V, Bouchier C, Ducos-Galand M, Skovgaard O, Mazel D.

Mol Microbiol. 2014 Feb;91(4):665-78. doi: 10.1111/mmi.12483. Epub 2014 Jan 7.

PMID:
24308271
19.

Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads.

Darrasse A, Carrère S, Barbe V, Boureau T, Arrieta-Ortiz ML, Bonneau S, Briand M, Brin C, Cociancich S, Durand K, Fouteau S, Gagnevin L, Guérin F, Guy E, Indiana A, Koebnik R, Lauber E, Munoz A, Noël LD, Pieretti I, Poussier S, Pruvost O, Robène-Soustrade I, Rott P, Royer M, Serres-Giardi L, Szurek B, van Sluys MA, Verdier V, Vernière C, Arlat M, Manceau C, Jacques MA.

BMC Genomics. 2013 Nov 6;14:761. doi: 10.1186/1471-2164-14-761.

20.

Genome Sequence of Halomonas sp. Strain A3H3, Isolated from Arsenic-Rich Marine Sediments.

Koechler S, Plewniak F, Barbe V, Battaglia-Brunet F, Jost B, Joulian C, Philipps M, Vicaire S, Vincent S, Ye T, Bertin PN.

Genome Announc. 2013 Oct 10;1(5). pii: e00819-13. doi: 10.1128/genomeA.00819-13.

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