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Items: 1 to 20 of 133

1.

Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes.

Lebrigand K, He le D, Thakur N, Arguel MJ, Polanowska J, Henrissat B, Record E, Magdelenat G, Barbe V, Raffaele S, Barbry P, Ewbank JJ.

PLoS Genet. 2016 May 6;12(5):e1006017. doi: 10.1371/journal.pgen.1006017. eCollection 2016 May.

2.

Complete Genome Sequence of Mycoplasma mycoides subsp. mycoides T1/44, a Vaccine Strain against Contagious Bovine Pleuropneumonia.

Gourgues G, Barré A, Beaudoing E, Weber J, Magdelenat G, Barbe V, Schieck E, Jores J, Vashee S, Blanchard A, Lartigue C, Sirand-Pugnet P.

Genome Announc. 2016 Apr 14;4(2). pii: e00263-16. doi: 10.1128/genomeA.00263-16.

3.

Genomic and physiological analysis reveals versatile metabolic capacity of deep-sea Photobacterium phosphoreum ANT-2200.

Zhang SD, Santini CL, Zhang WJ, Barbe V, Mangenot S, Guyomar C, Garel M, Chen HT, Li XG, Yin QJ, Zhao Y, Armengaud J, Gaillard JC, Martini S, Pradel N, Vidaud C, Alberto F, Médigue C, Tamburini C, Wu LF.

Extremophiles. 2016 May;20(3):301-10. doi: 10.1007/s00792-016-0822-1. Epub 2016 Apr 2.

PMID:
27039108
4.

The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis.

Belda E, van Heck RG, Lopez-Sanchez MJ, Cruveiller S, Barbe V, Fraser C, Klenk HP, Petersen J, Morgat A, Nikel PI, Vallenet D, Rouy Z, Sekowska A, Martins Dos Santos VA, de Lorenzo V, Danchin A, Médigue C.

Environ Microbiol. 2016 Feb 23. doi: 10.1111/1462-2920.13230. [Epub ahead of print]

PMID:
26913973
5.

Permanent draft genome sequence of the probiotic strain Propionibacterium freudenreichii CIRM-BIA 129 (ITG P20).

Falentin H, Deutsch SM, Loux V, Hammani A, Buratti J, Parayre S, Chuat V, Barbe V, Aury JM, Jan G, Le Loir Y.

Stand Genomic Sci. 2016 Jan 14;11:6. doi: 10.1186/s40793-015-0120-z. eCollection 2016.

6.

Recurrent DNA virus domestication leading to different parasite virulence strategies.

Pichon A, Bézier A, Urbach S, Aury JM, Jouan V, Ravallec M, Guy J, Cousserans F, Thézé J, Gauthier J, Demettre E, Schmieder S, Wurmser F, Sibut V, Poirié M, Colinet D, da Silva C, Couloux A, Barbe V, Drezen JM, Volkoff AN.

Sci Adv. 2015 Nov 27;1(10):e1501150. doi: 10.1126/sciadv.1501150. eCollection 2015 Nov.

7.

Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges.

Gordon JL, Lefeuvre P, Escalon A, Barbe V, Cruveiller S, Gagnevin L, Pruvost O.

BMC Genomics. 2015 Dec 23;16:1098. doi: 10.1186/s12864-015-2310-x.

8.

Thiomonas sp. CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea.

Farasin J, Andres J, Casiot C, Barbe V, Faerber J, Halter D, Heintz D, Koechler S, Lièvremont D, Lugan R, Marchal M, Plewniak F, Seby F, Bertin PN, Arsène-Ploetze F.

Front Microbiol. 2015 Sep 28;6:993. doi: 10.3389/fmicb.2015.00993. eCollection 2015.

9.

Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas.

Freel KC, Krueger MC, Farasin J, Brochier-Armanet C, Barbe V, Andrès J, Cholley PE, Dillies MA, Jagla B, Koechler S, Leva Y, Magdelenat G, Plewniak F, Proux C, Coppée JY, Bertin PN, Heipieper HJ, Arsène-Ploetze F.

PLoS One. 2015 Sep 30;10(9):e0139011. doi: 10.1371/journal.pone.0139011. eCollection 2015.

10.

Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Sayavedra L, Kleiner M, Ponnudurai R, Wetzel S, Pelletier E, Barbe V, Satoh N, Shoguchi E, Fink D, Breusing C, Reusch TB, Rosenstiel P, Schilhabel MB, Becher D, Schweder T, Markert S, Dubilier N, Petersen JM.

Elife. 2015 Sep 15;4:e07966. doi: 10.7554/eLife.07966.

11.

Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations.

Chateigner A, Bézier A, Labrousse C, Jiolle D, Barbe V, Herniou EA.

Viruses. 2015 Jul 7;7(7):3625-46. doi: 10.3390/v7072788.

12.

AAC(3)-XI, a new aminoglycoside 3-N-acetyltransferase from Corynebacterium striatum.

Galimand M, Fishovitz J, Lambert T, Barbe V, Zajicek J, Mobashery S, Courvalin P.

Antimicrob Agents Chemother. 2015 Sep;59(9):5647-53. doi: 10.1128/AAC.01203-15. Epub 2015 Jul 6.

13.

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A.

Mol Ecol Resour. 2016 Jan;16(1):254-65. doi: 10.1111/1755-0998.12425. Epub 2015 May 29.

PMID:
25944057
14.

Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii.

Loux V, Mariadassou M, Almeida S, Chiapello H, Hammani A, Buratti J, Gendrault A, Barbe V, Aury JM, Deutsch SM, Parayre S, Madec MN, Chuat V, Jan G, Peterlongo P, Azevedo V, Le Loir Y, Falentin H.

BMC Genomics. 2015 Apr 15;16:296. doi: 10.1186/s12864-015-1467-7.

15.

Draft Genome Sequence of Xanthomonas sacchari Strain LMG 476.

Pieretti I, Bolot S, Carrère S, Barbe V, Cociancich S, Rott P, Royer M.

Genome Announc. 2015 Mar 19;3(2). pii: e00146-15. doi: 10.1128/genomeA.00146-15.

16.

Two host clades, two bacterial arsenals: evolution through gene losses in facultative endosymbionts.

Rollat-Farnier PA, Santos-Garcia D, Rao Q, Sagot MF, Silva FJ, Henri H, Zchori-Fein E, Latorre A, Moya A, Barbe V, Liu SS, Wang XW, Vavre F, Mouton L.

Genome Biol Evol. 2015 Feb 20;7(3):839-55. doi: 10.1093/gbe/evv030.

17.

Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi.

Fontanillas E, Hood ME, Badouin H, Petit E, Barbe V, Gouzy J, de Vienne DM, Aguileta G, Poulain J, Wincker P, Chen Z, Toh SS, Cuomo CA, Perlin MH, Gladieux P, Giraud T.

Mol Biol Evol. 2015 Apr;32(4):928-43. doi: 10.1093/molbev/msu396. Epub 2014 Dec 21.

18.

Draft Genome Sequence of Propane- and Butane-Oxidizing Actinobacterium Rhodococcus ruber IEGM 231.

Ivshina IB, Kuyukina MS, Krivoruchko AV, Barbe V, Fischer C.

Genome Announc. 2014 Dec 11;2(6). pii: e01297-14. doi: 10.1128/genomeA.01297-14.

19.

Organization and evolution of transposable elements along the bread wheat chromosome 3B.

Daron J, Glover N, Pingault L, Theil S, Jamilloux V, Paux E, Barbe V, Mangenot S, Alberti A, Wincker P, Quesneville H, Feuillet C, Choulet F.

Genome Biol. 2014;15(12):546.

20.

Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens.

Grandaubert J, Lowe RG, Soyer JL, Schoch CL, Van de Wouw AP, Fudal I, Robbertse B, Lapalu N, Links MG, Ollivier B, Linglin J, Barbe V, Mangenot S, Cruaud C, Borhan H, Howlett BJ, Balesdent MH, Rouxel T.

BMC Genomics. 2014 Oct 12;15:891. doi: 10.1186/1471-2164-15-891.

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