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Results: 1 to 20 of 34

1.

Conversion of BAC Clones into Binary BAC (BIBAC) Vectors and Their Delivery into Basidiomycete Fungal Cells Using Agrobacterium tumefaciens.

Ali S, Bakkeren G.

Methods Mol Biol. 2015;1227:199-215. doi: 10.1007/978-1-4939-1652-8_9.

PMID:
25239747
[PubMed - in process]
2.

An immunity-triggering effector from the Barley smut fungus Ustilago hordei resides in an Ustilaginaceae-specific cluster bearing signs of transposable element-assisted evolution.

Ali S, Laurie JD, Linning R, Cervantes-Chávez JA, Gaudet D, Bakkeren G.

PLoS Pathog. 2014 Jul 3;10(7):e1004223. doi: 10.1371/journal.ppat.1004223. eCollection 2014 Jul.

PMID:
24992661
[PubMed - in process]
Free PMC Article
3.

Using transcription of six Puccinia triticina races to identify the effective secretome during infection of wheat.

Bruce M, Neugebauer KA, Joly DL, Migeon P, Cuomo CA, Wang S, Akhunov E, Bakkeren G, Kolmer JA, Fellers JP.

Front Plant Sci. 2014 Jan 13;4:520. doi: 10.3389/fpls.2013.00520. eCollection 2014 Jan 13.

PMID:
24454317
[PubMed]
Free PMC Article
4.

The transition from a phytopathogenic smut ancestor to an anamorphic biocontrol agent deciphered by comparative whole-genome analysis.

Lefebvre F, Joly DL, Labbé C, Teichmann B, Linning R, Belzile F, Bakkeren G, Bélanger RR.

Plant Cell. 2013 Jun;25(6):1946-59. doi: 10.1105/tpc.113.113969. Epub 2013 Jun 25.

PMID:
23800965
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Do TE activity and counteracting genome defenses, RNAi and methylation, shape the sex lives of smut fungi?

Laurie JD, Linning R, Wong P, Bakkeren G.

Plant Signal Behav. 2013 Apr;8(4):e23853. doi: 10.4161/psb.23853. Epub 2013 Feb 20.

PMID:
23425853
[PubMed - indexed for MEDLINE]
6.

Host-induced gene silencing of wheat leaf rust fungus Puccinia triticina pathogenicity genes mediated by the Barley stripe mosaic virus.

Panwar V, McCallum B, Bakkeren G.

Plant Mol Biol. 2013 Apr;81(6):595-608. doi: 10.1007/s11103-013-0022-7. Epub 2013 Feb 17.

PMID:
23417582
[PubMed - indexed for MEDLINE]
7.

Conserved loci of leaf and stem rust fungi of wheat share synteny interrupted by lineage-specific influx of repeat elements.

Fellers JP, Soltani BM, Bruce M, Linning R, Cuomo CA, Szabo LJ, Bakkeren G.

BMC Genomics. 2013 Jan 29;14:60. doi: 10.1186/1471-2164-14-60.

PMID:
23356831
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Endogenous silencing of Puccinia triticina pathogenicity genes through in planta-expressed sequences leads to the suppression of rust diseases on wheat.

Panwar V, McCallum B, Bakkeren G.

Plant J. 2013 Feb;73(3):521-32. doi: 10.1111/tpj.12047. Epub 2012 Dec 12.

PMID:
23110316
[PubMed - indexed for MEDLINE]
9.

Genome comparison of barley and maize smut fungi reveals targeted loss of RNA silencing components and species-specific presence of transposable elements.

Laurie JD, Ali S, Linning R, Mannhaupt G, Wong P, Güldener U, Münsterkötter M, Moore R, Kahmann R, Bakkeren G, Schirawski J.

Plant Cell. 2012 May;24(5):1733-45. doi: 10.1105/tpc.112.097261. Epub 2012 May 22.

PMID:
22623492
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi.

Xu J, Linning R, Fellers J, Dickinson M, Zhu W, Antonov I, Joly DL, Donaldson ME, Eilam T, Anikster Y, Banks T, Munro S, Mayo M, Wynhoven B, Ali J, Moore R, McCallum B, Borodovsky M, Saville B, Bakkeren G.

BMC Genomics. 2011 Mar 24;12:161. doi: 10.1186/1471-2164-12-161.

PMID:
21435244
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Proteome analysis of wheat leaf rust fungus, Puccinia triticina, infection structures enriched for haustoria.

Song X, Rampitsch C, Soltani B, Mauthe W, Linning R, Banks T, McCallum B, Bakkeren G.

Proteomics. 2011 Mar;11(5):944-63. doi: 10.1002/pmic.201000014. Epub 2011 Jan 31.

PMID:
21280219
[PubMed - indexed for MEDLINE]
12.

Response to environmental stresses, cell-wall integrity, and virulence are orchestrated through the calcineurin pathway in Ustilago hordei.

Cervantes-Chávez JA, Ali S, Bakkeren G.

Mol Plant Microbe Interact. 2011 Feb;24(2):219-32. doi: 10.1094/MPMI-09-10-0202.

PMID:
20977307
[PubMed - indexed for MEDLINE]
Free Article
13.

Introduction of large DNA inserts into the barley pathogenic fungus, Ustilago hordei, via recombined binary BAC vectors and Agrobacterium-mediated transformation.

Ali S, Bakkeren G.

Curr Genet. 2011 Feb;57(1):63-73. doi: 10.1007/s00294-010-0324-0. Epub 2010 Oct 10.

PMID:
20936474
[PubMed - indexed for MEDLINE]
14.

Morphological and molecular analyses of host and nonhost interactions involving barley and wheat and the covered smut pathogen Ustilago hordei.

Gaudet DA, Wang Y, Penniket C, Lu ZX, Bakkeren G, Laroche A.

Mol Plant Microbe Interact. 2010 Dec;23(12):1619-34. doi: 10.1094/MPMI-11-09-0271.

PMID:
20822422
[PubMed - indexed for MEDLINE]
Free Article
15.

Use of inter-simple sequence repeats and amplified fragment length polymorphisms to analyze genetic relationships among small grain-infecting species of ustilago.

Menzies JG, Bakkeren G, Matheson F, Procunier JD, Woods S.

Phytopathology. 2003 Feb;93(2):167-75. doi: 10.1094/PHYTO.2003.93.2.167.

PMID:
18943131
[PubMed]
Free Article
16.

Sex in smut fungi: Structure, function and evolution of mating-type complexes.

Bakkeren G, Kämper J, Schirawski J.

Fungal Genet Biol. 2008 Aug;45 Suppl 1:S15-21. doi: 10.1016/j.fgb.2008.04.005. Epub 2008 May 22. Review.

PMID:
18501648
[PubMed - indexed for MEDLINE]
17.

Hallmarks of RNA silencing are found in the smut fungus Ustilago hordei but not in its close relative Ustilago maydis.

Laurie JD, Linning R, Bakkeren G.

Curr Genet. 2008 Jan;53(1):49-58. Epub 2007 Nov 30.

PMID:
18060405
[PubMed - indexed for MEDLINE]
18.

Generation of a wheat leaf rust, Puccinia triticina, EST database from stage-specific cDNA libraries.

Hu G, Linning R, McCallum B, Banks T, Cloutier S, Butterfield Y, Liu J, Kirkpatrick R, Stott J, Yang G, Smailus D, Jones S, Marra M, Schein J, Bakkeren G.

Mol Plant Pathol. 2007 Jul;8(4):451-67. doi: 10.1111/j.1364-3703.2007.00406.x.

PMID:
20507513
[PubMed]
19.

Complementation of Ustilago maydis MAPK mutants by a wheat leaf rust, Puccinia triticina homolog: potential for functional analyses of rust genes.

Hu G, Kamp A, Linning R, Naik S, Bakkeren G.

Mol Plant Microbe Interact. 2007 Jun;20(6):637-47.

PMID:
17555272
[PubMed - indexed for MEDLINE]
Free Article
20.

Development and linkage mapping of E-STS and RGA markers for functional gene homologues in apple.

Naik S, Hampson C, Gasic K, Bakkeren G, Korban SS.

Genome. 2006 Aug;49(8):959-68.

PMID:
17036071
[PubMed - indexed for MEDLINE]

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