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Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi) in Sulfur Cycling.

Wasmund K, Cooper M, Schreiber L, Lloyd KG, Baker BJ, Petersen DG, Jørgensen BB, Stepanauskas R, Reinhardt R, Schramm A, Loy A, Adrian L.

MBio. 2016 May 3;7(3). pii: e00266-16. doi: 10.1128/mBio.00266-16.


Toward Better Genetically Encoded Sensors of Membrane Potential.

Storace D, Sepehri Rad M, Kang B, Cohen LB, Hughes T, Baker BJ.

Trends Neurosci. 2016 May;39(5):277-89. doi: 10.1016/j.tins.2016.02.005. Review.


Imaging Membrane Potential with Two Types of Genetically Encoded Fluorescent Voltage Sensors.

Lee S, Piao HH, Sepheri-Rad M, Jung A, Sung U, Song YK, Baker BJ.

J Vis Exp. 2016 Feb 4;(108). doi: 10.3791/53566.


Abrupt Decline in Tuberculosis among Foreign-Born Persons in the United States.

Baker BJ, Winston CA, Liu Y, France AM, Cain KP.

PLoS One. 2016 Feb 10;11(2):e0147353. doi: 10.1371/journal.pone.0147353. eCollection 2016.


Genomic reconstruction of a novel, deeply branched sediment archaeal phylum with pathways for acetogenesis and sulfur reduction.

Seitz KW, Lazar CS, Hinrichs KU, Teske AP, Baker BJ.

ISME J. 2016 Jan 29. doi: 10.1038/ismej.2015.233. [Epub ahead of print]


Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and Other Microbial Community Members in Biogeochemical Transformations in Oil Reservoirs.

Hu P, Tom L, Singh A, Thomas BC, Baker BJ, Piceno YM, Andersen GL, Banfield JF.

MBio. 2016 Jan 19;7(1):e01669-15. doi: 10.1128/mBio.01669-15.


Discrimination of Multiple Coronal Stop Contrasts in Wubuy (Australia): A Natural Referent Consonant Account.

Bundgaard-Nielsen RL, Baker BJ, Kroos CH, Harvey M, Best CT.

PLoS One. 2015 Dec 3;10(12):e0142054. doi: 10.1371/journal.pone.0142054. eCollection 2015.


Genomic evidence for distinct carbon substrate preferences and ecological niches of Bathyarchaeota in estuarine sediments.

Lazar CS, Baker BJ, Seitz K, Hyde AS, Dick GJ, Hinrichs KU, Teske AP.

Environ Microbiol. 2016 Apr;18(4):1200-11. doi: 10.1111/1462-2920.13142. Epub 2016 Jan 18.


Developing Fast Fluorescent Protein Voltage Sensors by Optimizing FRET Interactions.

Sung U, Sepehri-Rad M, Piao HH, Jin L, Hughes T, Cohen LB, Baker BJ.

PLoS One. 2015 Nov 20;10(11):e0141585. doi: 10.1371/journal.pone.0141585. eCollection 2015.


Genomic and transcriptomic evidence for scavenging of diverse organic compounds by widespread deep-sea archaea.

Li M, Baker BJ, Anantharaman K, Jain S, Breier JA, Dick GJ.

Nat Commun. 2015 Nov 17;6:8933. doi: 10.1038/ncomms9933.


Genetically Encoded Protein Sensors of Membrane Potential.

Storace D, Rad MS, Han Z, Jin L, Cohen LB, Hughes T, Baker BJ, Sung U.

Adv Exp Med Biol. 2015;859:493-509. doi: 10.1007/978-3-319-17641-3_20. Review.


Linker length and fusion site composition improve the optical signal of genetically encoded fluorescent voltage sensors.

Jung A, Garcia JE, Kim E, Yoon BJ, Baker BJ.

Neurophotonics. 2015 Apr;2(2):021012. doi: 10.1117/1.NPh.2.2.021012. Epub 2015 Mar 5.


Structure and Function of Macroalgal Natural Products.

Young RM, Schoenrock KM, von Salm JL, Amsler CD, Baker BJ.

Methods Mol Biol. 2015;1308:39-73. doi: 10.1007/978-1-4939-2684-8_2.


Inhibition of System Xc(-) Transporter Attenuates Autoimmune Inflammatory Demyelination.

Evonuk KS, Baker BJ, Doyle RE, Moseley CE, Sestero CM, Johnston BP, De Sarno P, Tang A, Gembitsky I, Hewett SJ, Weaver CT, Raman C, DeSilva TM.

J Immunol. 2015 Jul 15;195(2):450-63. doi: 10.4049/jimmunol.1401108. Epub 2015 Jun 12.


Genomic resolution of linkages in carbon, nitrogen, and sulfur cycling among widespread estuary sediment bacteria.

Baker BJ, Lazar CS, Teske AP, Dick GJ.

Microbiome. 2015 Apr 13;3:14. doi: 10.1186/s40168-015-0077-6. eCollection 2015.


Identification of communal oviposition pheromones from the black fly Simulium vittatum.

McGaha TW Jr, Young RM, Burkett-Cadena ND, Iburg JP, Beau JM, Hassan S, Katholi CR, Cupp EW, Baker BJ, Unnasch TR, Noblet R.

PLoS One. 2015 Mar 18;10(3):e0118904. doi: 10.1371/journal.pone.0118904. eCollection 2015.


Expression of Interferon-γ Receptor Genes in Peripheral Blood Mononuclear Cells Is Associated With Rheumatoid Arthritis and Its Radiographic Severity in African Americans.

Tang Q, Danila MI, Cui X, Parks L, Baker BJ, Reynolds RJ, Raman C, Wanseck KC, Redden DT, Johnson MR; CLEAR Investigators, Bridges SL Jr.

Arthritis Rheumatol. 2015 May;67(5):1165-70. doi: 10.1002/art.39056.


Synthesis, stereochemical analysis, and derivatization of myricanol provide new probes that promote autophagic tau clearance.

Martin MD, Calcul L, Smith C, Jinwal UK, Fontaine SN, Darling A, Seeley K, Wojtas L, Narayan M, Gestwicki JE, Smith GR, Reitz AB, Baker BJ, Dickey CA.

ACS Chem Biol. 2015 Apr 17;10(4):1099-109. doi: 10.1021/cb501013w. Epub 2015 Jan 30.


Additional benefits of GeneXpert MTB/RIF assay for the evaluation of pulmonary tuberculosis among inpatients.

Baker BJ, Holtom PD.

Clin Infect Dis. 2015 Apr 15;60(8):1287-8. doi: 10.1093/cid/civ006. Epub 2015 Jan 13. No abstract available.

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