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Results: 14

1.

Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean.

Schroeder H, Ávila-Arcos MC, Malaspinas AS, Poznik GD, Sandoval-Velasco M, Carpenter ML, Moreno-Mayar JV, Sikora M, Johnson PL, Allentoft ME, Samaniego JA, Haviser JB, Dee MW, Stafford TW Jr, Salas A, Orlando L, Willerslev E, Bustamante CD, Gilbert MT.

Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3669-73. doi: 10.1073/pnas.1421784112. Epub 2015 Mar 9.

2.

Ancient genomics.

Der Sarkissian C, Allentoft ME, Ávila-Arcos MC, Barnett R, Campos PF, Cappellini E, Ermini L, Fernández R, da Fonseca R, Ginolhac A, Hansen AJ, Jónsson H, Korneliussen T, Margaryan A, Martin MD, Moreno-Mayar JV, Raghavan M, Rasmussen M, Velasco MS, Schroeder H, Schubert M, Seguin-Orlando A, Wales N, Gilbert MT, Willerslev E, Orlando L.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130387. doi: 10.1098/rstb.2013.0387.

3.

Optimization of DNA recovery and amplification from non-carbonized archaeobotanical remains.

Wales N, Andersen K, Cappellini E, Avila-Arcos MC, Gilbert MT.

PLoS One. 2014 Jan 27;9(1):e86827. doi: 10.1371/journal.pone.0086827. eCollection 2014.

4.

Tracking niche variation over millennial timescales in sympatric killer whale lineages.

Foote AD, Newton J, Ávila-Arcos MC, Kampmann ML, Samaniego JA, Post K, Rosing-Asvid A, Sinding MH, Gilbert MT.

Proc Biol Sci. 2013 Aug 14;280(1768):20131481. doi: 10.1098/rspb.2013.1481. Print 2013 Oct 7.

5.

Genetic diversity among pandemic 2009 influenza viruses isolated from a transmission chain.

Fordyce SL, Bragstad K, Pedersen SS, Jensen TG, Gahrn-Hansen B, Daniels R, Hay A, Kampmann ML, Bruhn CA, Moreno-Mayar JV, Ávila-Arcos MC, Gilbert MT, Nielsen LP.

Virol J. 2013 Apr 12;10:116. doi: 10.1186/1743-422X-10-116.

6.

Deep sequencing of RNA from ancient maize kernels.

Fordyce SL, Ávila-Arcos MC, Rasmussen M, Cappellini E, Romero-Navarro JA, Wales N, Alquezar-Planas DE, Penfield S, Brown TA, Vielle-Calzada JP, Montiel R, Jørgensen T, Odegaard N, Jacobs M, Arriaza B, Higham TF, Ramsey CB, Willerslev E, Gilbert MT.

PLoS One. 2013;8(1):e50961. doi: 10.1371/journal.pone.0050961. Epub 2013 Jan 11.

7.

Historically low mitochondrial DNA diversity in koalas (Phascolarctos cinereus).

Tsangaras K, Ávila-Arcos MC, Ishida Y, Helgen KM, Roca AL, Greenwood AD.

BMC Genet. 2012 Oct 24;13:92. doi: 10.1186/1471-2156-13-92.

8.

North African populations carry the signature of admixture with Neandertals.

Sánchez-Quinto F, Botigué LR, Civit S, Arenas C, Avila-Arcos MC, Bustamante CD, Comas D, Lalueza-Fox C.

PLoS One. 2012;7(10):e47765. doi: 10.1371/journal.pone.0047765. Epub 2012 Oct 17.

9.

One hundred twenty years of koala retrovirus evolution determined from museum skins.

Ávila-Arcos MC, Ho SY, Ishida Y, Nikolaidis N, Tsangaras K, Hönig K, Medina R, Rasmussen M, Fordyce SL, Calvignac-Spencer S, Willerslev E, Gilbert MT, Helgen KM, Roca AL, Greenwood AD.

Mol Biol Evol. 2013 Feb;30(2):299-304. doi: 10.1093/molbev/mss223. Epub 2012 Sep 14. Erratum in: Mol Biol Evol. 2013 May;30(5):1237.

10.

Genomic affinities of two 7,000-year-old Iberian hunter-gatherers.

Sánchez-Quinto F, Schroeder H, Ramirez O, Avila-Arcos MC, Pybus M, Olalde I, Velazquez AM, Marcos ME, Encinas JM, Bertranpetit J, Orlando L, Gilbert MT, Lalueza-Fox C.

Curr Biol. 2012 Aug 21;22(16):1494-9. doi: 10.1016/j.cub.2012.06.005. Epub 2012 Jun 28.

11.

Application and comparison of large-scale solution-based DNA capture-enrichment methods on ancient DNA.

Avila-Arcos MC, Cappellini E, Romero-Navarro JA, Wales N, Moreno-Mayar JV, Rasmussen M, Fordyce SL, Montiel R, Vielle-Calzada JP, Willerslev E, Gilbert MT.

Sci Rep. 2011;1:74. doi: 10.1038/srep00074. Epub 2011 Aug 24.

12.

A simple method for the parallel deep sequencing of full influenza A genomes.

Kampmann ML, Fordyce SL, Avila-Arcos MC, Rasmussen M, Willerslev E, Nielsen LP, Gilbert MT.

J Virol Methods. 2011 Dec;178(1-2):243-8. doi: 10.1016/j.jviromet.2011.09.001. Epub 2011 Sep 17.

PMID:
21946287
13.

An Aboriginal Australian genome reveals separate human dispersals into Asia.

Rasmussen M, Guo X, Wang Y, Lohmueller KE, Rasmussen S, Albrechtsen A, Skotte L, Lindgreen S, Metspalu M, Jombart T, Kivisild T, Zhai W, Eriksson A, Manica A, Orlando L, De La Vega FM, Tridico S, Metspalu E, Nielsen K, Ávila-Arcos MC, Moreno-Mayar JV, Muller C, Dortch J, Gilbert MT, Lund O, Wesolowska A, Karmin M, Weinert LA, Wang B, Li J, Tai S, Xiao F, Hanihara T, van Driem G, Jha AR, Ricaut FX, de Knijff P, Migliano AB, Gallego Romero I, Kristiansen K, Lambert DM, Brunak S, Forster P, Brinkmann B, Nehlich O, Bunce M, Richards M, Gupta R, Bustamante CD, Krogh A, Foley RA, Lahr MM, Balloux F, Sicheritz-Pontén T, Villems R, Nielsen R, Wang J, Willerslev E.

Science. 2011 Oct 7;334(6052):94-8. doi: 10.1126/science.1211177. Epub 2011 Sep 22.

14.

High-throughput sequencing of core STR loci for forensic genetic investigations using the Roche Genome Sequencer FLX platform.

Fordyce SL, Ávila-Arcos MC, Rockenbauer E, Børsting C, Frank-Hansen R, Petersen FT, Willerslev E, Hansen AJ, Morling N, Gilbert MT.

Biotechniques. 2011 Aug;51(2):127-33. doi: 10.2144/000113721.

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