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Results: 1 to 20 of 23

1.

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intra- and Inter-Specific Populations of Gossypium spp.

Hulse-Kemp AM, Lemm J, Plieske J, Ashrafi H, Buyyarapu R, Fang DD, Frelichowski J, Giband M, Hague S, Hinze LL, Kochan KJ, Riggs PK, Scheffler JA, Udall JA, Ulloa M, Wang SS, Zhu QH, Bag SK, Bhardwaj A, Burke JJ, Byers RL, Claverie M, Gore MA, Harker DB, Islam MS, Jenkins JN, Jones DC, Lacape JM, Llewellyn DJ, Percy RG, Pepper AE, Poland JA, Mohan Rai K, Sawant SV, Kumar Singh S, Spriggs A, Taylor JM, Wang F, Yourstone SM, Zheng X, Lawley CT, Ganal MW, Van Deynze A, Wilson IW, Stelly DM.

G3 (Bethesda). 2015 Apr 22. pii: g3.115.018416. doi: 10.1534/g3.115.018416. [Epub ahead of print]

2.

BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences and Perspectives for Genetic Mapping.

Hulse-Kemp AM, Ashrafi H, Stoffel K, Zheng X, Saski C, Scheffler BE, Fang DD, Chen ZJ, Van Deynze A, Stelly DM.

G3 (Bethesda). 2015 Apr 9. pii: g3.115.017749. doi: 10.1534/g3.115.017749. [Epub ahead of print]

3.

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts.

Hulse-Kemp AM, Ashrafi H, Zheng X, Wang F, Hoegenauer KA, Maeda AB, Yang SS, Stoffel K, Matvienko M, Clemons K, Udall JA, Van Deynze A, Jones DC, Stelly DM.

BMC Genomics. 2014 Oct 30;15:945. doi: 10.1186/1471-2164-15-945.

4.

A population based study on hepatitis B virus in northern iran, amol.

Keyvani H, Sohrabi M, Zamani F, Poustchi H, Ashrafi H, Saeedian F, Mooadi M, Motamed N, Ajdarkosh H, Khonsari M, Hemmasi G, Ameli M, Kabir A, Khodadost M.

Hepat Mon. 2014 Aug 17;14(8):e20540. doi: 10.5812/hepatmon.20540. eCollection 2014 Aug.

5.

Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species.

Kim S, Park M, Yeom SI, Kim YM, Lee JM, Lee HA, Seo E, Choi J, Cheong K, Kim KT, Jung K, Lee GW, Oh SK, Bae C, Kim SB, Lee HY, Kim SY, Kim MS, Kang BC, Jo YD, Yang HB, Jeong HJ, Kang WH, Kwon JK, Shin C, Lim JY, Park JH, Huh JH, Kim JS, Kim BD, Cohen O, Paran I, Suh MC, Lee SB, Kim YK, Shin Y, Noh SJ, Park J, Seo YS, Kwon SY, Kim HA, Park JM, Kim HJ, Choi SB, Bosland PW, Reeves G, Jo SH, Lee BW, Cho HT, Choi HS, Lee MS, Yu Y, Do Choi Y, Park BS, van Deynze A, Ashrafi H, Hill T, Kim WT, Pai HS, Ahn HK, Yeam I, Giovannoni JJ, Rose JK, Sørensen I, Lee SJ, Kim RW, Choi IY, Choi BS, Lim JS, Lee YH, Choi D.

Nat Genet. 2014 Mar;46(3):270-8. doi: 10.1038/ng.2877. Epub 2014 Jan 19.

PMID:
24441736
6.

QTL mapping of fruit rot resistance to the plant pathogen Phytophthora capsici in a recombinant inbred line Capsicum annuum population.

Naegele RP, Ashrafi H, Hill TA, Chin-Wo SR, Van Deynze AE, Hausbeck MK.

Phytopathology. 2014 May;104(5):479-83. doi: 10.1094/PHYTO-05-13-0143-R.

PMID:
24168044
7.

A pharmacokinetic overview of nanotechnology-based drug delivery systems: an ADME-oriented approach.

Hamidi M, Azadi A, Rafiei P, Ashrafi H.

Crit Rev Ther Drug Carrier Syst. 2013;30(5):435-67. Review.

PMID:
24099328
8.

Nanostructure L-asparaginase-fatty acid bioconjugate: synthesis, preformulation study and biological assessment.

Ashrafi H, Amini M, Mohammadi-Samani S, Ghasemi Y, Azadi A, Tabandeh MR, Kamali-Sarvestani E, Daneshamouz S.

Int J Biol Macromol. 2013 Nov;62:180-7. doi: 10.1016/j.ijbiomac.2013.08.028. Epub 2013 Aug 30.

PMID:
23994737
9.

Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing.

Page JT, Huynh MD, Liechty ZS, Grupp K, Stelly D, Hulse AM, Ashrafi H, Van Deynze A, Wendel JF, Udall JA.

G3 (Bethesda). 2013 Oct 3;3(10):1809-18. doi: 10.1534/g3.113.007229.

10.

An Ultra High-Density, Transcript-Based, Genetic Map of Lettuce.

Truco MJ, Ashrafi H, Kozik A, van Leeuwen H, Bowers J, Reyes Chin Wo S, Stoffel K, Xu H, Hill T, Van Deynze A, Michelmore RW.

G3 (Bethesda). 2013 Mar 22. pii: g3.112.004929v3. doi: 10.1534/g3.112.004929. [Epub ahead of print]

11.

Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip.

Hill TA, Ashrafi H, Reyes-Chin-Wo S, Yao J, Stoffel K, Truco MJ, Kozik A, Michelmore RW, Van Deynze A.

PLoS One. 2013;8(2):e56200. doi: 10.1371/journal.pone.0056200. Epub 2013 Feb 8.

12.

Identification of QTLs for capsaicinoids, fruit quality, and plant architecture-related traits in an interspecific Capsicum RIL population.

Yarnes SC, Ashrafi H, Reyes-Chin-Wo S, Hill TA, Stoffel KM, Van Deynze A.

Genome. 2013 Jan;56(1):61-74. doi: 10.1139/gen-2012-0083. Epub 2013 Jan 1.

PMID:
23379339
13.

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.

Paterson AH, Wendel JF, Gundlach H, Guo H, Jenkins J, Jin D, Llewellyn D, Showmaker KC, Shu S, Udall J, Yoo MJ, Byers R, Chen W, Doron-Faigenboim A, Duke MV, Gong L, Grimwood J, Grover C, Grupp K, Hu G, Lee TH, Li J, Lin L, Liu T, Marler BS, Page JT, Roberts AW, Romanel E, Sanders WS, Szadkowski E, Tan X, Tang H, Xu C, Wang J, Wang Z, Zhang D, Zhang L, Ashrafi H, Bedon F, Bowers JE, Brubaker CL, Chee PW, Das S, Gingle AR, Haigler CH, Harker D, Hoffmann LV, Hovav R, Jones DC, Lemke C, Mansoor S, ur Rahman M, Rainville LN, Rambani A, Reddy UK, Rong JK, Saranga Y, Scheffler BE, Scheffler JA, Stelly DM, Triplett BA, Van Deynze A, Vaslin MF, Waghmare VN, Walford SA, Wright RJ, Zaki EA, Zhang T, Dennis ES, Mayer KF, Peterson DG, Rokhsar DS, Wang X, Schmutz J.

Nature. 2012 Dec 20;492(7429):423-7. doi: 10.1038/nature11798.

PMID:
23257886
14.

De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.

Ashrafi H, Hill T, Stoffel K, Kozik A, Yao J, Chin-Wo SR, Van Deynze A.

BMC Genomics. 2012 Oct 30;13:571. doi: 10.1186/1471-2164-13-571.

15.

Uniform ripening encodes a Golden 2-like transcription factor regulating tomato fruit chloroplast development.

Powell AL, Nguyen CV, Hill T, Cheng KL, Figueroa-Balderas R, Aktas H, Ashrafi H, Pons C, Fernández-Muñoz R, Vicente A, Lopez-Baltazar J, Barry CS, Liu Y, Chetelat R, Granell A, Van Deynze A, Giovannoni JJ, Bennett AB.

Science. 2012 Jun 29;336(6089):1711-5. doi: 10.1126/science.1222218.

16.

Khorasan Disease: Prevalence of HTLV-I Associated Myelopathy/Tropical Spastic Paraparesis (HAM/TSP) In West Azarbaijan from 2004 to 2007.

Boostani R, Mellat Ardakani A, Ashrafi H.

Iran Red Crescent Med J. 2011 Jun;13(6):428-30. Epub 2011 Jun 1.

17.

Ultrasonographic evaluation of bowel wall thickness and intramural blood flow in ulcerative colitis.

Bavil AS, Somi MH, Nemati M, Nadergoli BS, Ghabili K, Mirnour R, Ashrafi H.

ISRN Gastroenterol. 2012;2012:370495. doi: 10.5402/2012/370495. Epub 2012 May 9.

18.

Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).

Stoffel K, van Leeuwen H, Kozik A, Caldwell D, Ashrafi H, Cui X, Tan X, Hill T, Reyes-Chin-Wo S, Truco MJ, Michelmore RW, Van Deynze A.

BMC Genomics. 2012 May 14;13:185. doi: 10.1186/1471-2164-13-185.

19.

The effect of quince leaf (Cydonia oblonga miller) decoction on testes in hypercholesterolemic rabbits: a pilot study.

Ashrafi H, Ghabili K, Alihemmati A, Jouyban A, Shoja MM, Aslanabadi S, Adl FH, Ghavimi H, Hajhosseini L.

Afr J Tradit Complement Altern Med. 2012 Dec 31;10(2):277-82. eCollection 2013.

20.

De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity.

Iorizzo M, Senalik DA, Grzebelus D, Bowman M, Cavagnaro PF, Matvienko M, Ashrafi H, Van Deynze A, Simon PW.

BMC Genomics. 2011 Aug 2;12:389. doi: 10.1186/1471-2164-12-389.

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