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Results: 1 to 20 of 129

1.

Design and development of exome capture sequencing for the domestic pig (Sus scrofa).

Robert C, Fuentes-Utrilla P, Troup K, Loecherbach J, Turner F, Talbot R, Archibald AL, Mileham A, Deeb N, Hume DA, Watson M.

BMC Genomics. 2014 Jul 3;15(1):550. doi: 10.1186/1471-2164-15-550.

PMID:
24988888
[PubMed - in process]
Free PMC Article
2.

The sheep genome illuminates biology of the rumen and lipid metabolism.

Jiang Y, Xie M, Chen W, Talbot R, Maddox JF, Faraut T, Wu C, Muzny DM, Li Y, Zhang W, Stanton JA, Brauning R, Barris WC, Hourlier T, Aken BL, Searle SM, Adelson DL, Bian C, Cam GR, Chen Y, Cheng S, DeSilva U, Dixen K, Dong Y, Fan G, Franklin IR, Fu S, Fuentes-Utrilla P, Guan R, Highland MA, Holder ME, Huang G, Ingham AB, Jhangiani SN, Kalra D, Kovar CL, Lee SL, Liu W, Liu X, Lu C, Lv T, Mathew T, McWilliam S, Menzies M, Pan S, Robelin D, Servin B, Townley D, Wang W, Wei B, White SN, Yang X, Ye C, Yue Y, Zeng P, Zhou Q, Hansen JB, Kristiansen K, Gibbs RA, Flicek P, Warkup CC, Jones HE, Oddy VH, Nicholas FW, McEwan JC, Kijas JW, Wang J, Worley KC, Archibald AL, Cockett N, Xu X, Wang W, Dalrymple BP.

Science. 2014 Jun 6;344(6188):1168-73. doi: 10.1126/science.1252806.

PMID:
24904168
[PubMed - indexed for MEDLINE]
3.

Analysis of the genetics of boar taint reveals both single SNPs and regional effects.

Rowe SJ, Karacaören B, de Koning DJ, Lukic B, Hastings-Clark N, Velander I, Haley CS, Archibald AL.

BMC Genomics. 2014 Jun 3;15:424. doi: 10.1186/1471-2164-15-424.

PMID:
24894739
[PubMed - in process]
Free PMC Article
4.

Down-regulation of mechanisms involved in cell transport and maintenance of mucosal integrity in pigs infected with Lawsonia intracellularis.

Smith SH, Wilson AD, Van Ettinger I, MacIntyre N, Archibald AL, Ait-Ali T.

Vet Res. 2014 May 20;45:55. doi: 10.1186/1297-9716-45-55.

PMID:
24885874
[PubMed - in process]
Free PMC Article
5.

Genomic variation in macrophage-cultured European porcine reproductive and respiratory syndrome virus Olot/91 revealed using ultra-deep next generation sequencing.

Lu ZH, Brown A, Wilson AD, Calvert JG, Balasch M, Fuentes-Utrilla P, Loecherbach J, Turner F, Talbot R, Archibald AL, Ait-Ali T.

Virol J. 2014 Mar 4;11:42. doi: 10.1186/1743-422X-11-42.

PMID:
24588855
[PubMed - in process]
Free PMC Article
6.

Development and validation of a high density SNP genotyping array for Atlantic salmon (Salmo salar).

Houston RD, Taggart JB, Cézard T, Bekaert M, Lowe NR, Downing A, Talbot R, Bishop SC, Archibald AL, Bron JE, Penman DJ, Davassi A, Brew F, Tinch AE, Gharbi K, Hamilton A.

BMC Genomics. 2014 Feb 6;15:90. doi: 10.1186/1471-2164-15-90.

PMID:
24524230
[PubMed - in process]
Free PMC Article
7.

A genome-wide linkage analysis for reproductive traits in F2 Large White × Meishan cross gilts.

Hernandez SC, Finlayson HA, Ashworth CJ, Haley CS, Archibald AL.

Anim Genet. 2014 Apr;45(2):191-7. doi: 10.1111/age.12123. Epub 2014 Jan 23.

PMID:
24456574
[PubMed - in process]
8.

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus.

Frantz LA, Schraiber JG, Madsen O, Megens HJ, Bosse M, Paudel Y, Semiadi G, Meijaard E, Li N, Crooijmans RP, Archibald AL, Slatkin M, Schook LB, Larson G, Groenen MA.

Genome Biol. 2013;14(9):R107.

PMID:
24070215
[PubMed - in process]
Free PMC Article
9.

The impact of breed and tissue compartment on the response of pig macrophages to lipopolysaccharide.

Kapetanovic R, Fairbairn L, Downing A, Beraldi D, Sester DP, Freeman TC, Tuggle CK, Archibald AL, Hume DA.

BMC Genomics. 2013 Aug 28;14:581. doi: 10.1186/1471-2164-14-581.

PMID:
23984833
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Structural and functional annotation of the porcine immunome.

Dawson HD, Loveland JE, Pascal G, Gilbert JG, Uenishi H, Mann KM, Sang Y, Zhang J, Carvalho-Silva D, Hunt T, Hardy M, Hu Z, Zhao SH, Anselmo A, Shinkai H, Chen C, Badaoui B, Berman D, Amid C, Kay M, Lloyd D, Snow C, Morozumi T, Cheng RP, Bystrom M, Kapetanovic R, Schwartz JC, Kataria R, Astley M, Fritz E, Steward C, Thomas M, Wilming L, Toki D, Archibald AL, Bed'Hom B, Beraldi D, Huang TH, Ait-Ali T, Blecha F, Botti S, Freeman TC, Giuffra E, Hume DA, Lunney JK, Murtaugh MP, Reecy JM, Harrow JL, Rogel-Gaillard C, Tuggle CK.

BMC Genomics. 2013 May 15;14:332. doi: 10.1186/1471-2164-14-332.

PMID:
23676093
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Comparative analysis of monocyte subsets in the pig.

Fairbairn L, Kapetanovic R, Beraldi D, Sester DP, Tuggle CK, Archibald AL, Hume DA.

J Immunol. 2013 Jun 15;190(12):6389-96. doi: 10.4049/jimmunol.1300365. Epub 2013 May 10.

PMID:
23667115
[PubMed - indexed for MEDLINE]
Free Article
12.

Signatures of diversifying selection in European pig breeds.

Wilkinson S, Lu ZH, Megens HJ, Archibald AL, Haley C, Jackson IJ, Groenen MA, Crooijmans RP, Ogden R, Wiener P.

PLoS Genet. 2013 Apr;9(4):e1003453. doi: 10.1371/journal.pgen.1003453. Epub 2013 Apr 25.

PMID:
23637623
[PubMed - in process]
Free PMC Article
13.

Secreted phosphoprotein 1 expression in endometrium and placental tissues of hyperprolific large white and meishan gilts.

Hernandez SC, Hogg CO, Billon Y, Sanchez MP, Bidanel JP, Haley CS, Archibald AL, Ashworth CJ.

Biol Reprod. 2013 May 16;88(5):120. doi: 10.1095/biolreprod.112.104679. Print 2013 May.

PMID:
23575146
[PubMed - indexed for MEDLINE]
Free Article
14.

A gene expression atlas of the domestic pig.

Freeman TC, Ivens A, Baillie JK, Beraldi D, Barnett MW, Dorward D, Downing A, Fairbairn L, Kapetanovic R, Raza S, Tomoiu A, Alberio R, Wu C, Su AI, Summers KM, Tuggle CK, Archibald AL, Hume DA.

BMC Biol. 2012 Nov 15;10:90. doi: 10.1186/1741-7007-10-90.

PMID:
23153189
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content.

Tortereau F, Servin B, Frantz L, Megens HJ, Milan D, Rohrer G, Wiedmann R, Beever J, Archibald AL, Schook LB, Groenen MA.

BMC Genomics. 2012 Nov 15;13:586. doi: 10.1186/1471-2164-13-586.

PMID:
23152986
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Analyses of pig genomes provide insight into porcine demography and evolution.

Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey BR, Sperber G, Stadler P, Sweedler JV, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook LB.

Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622.

PMID:
23151582
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Strong signatures of selection in the domestic pig genome.

Rubin CJ, Megens HJ, Martinez Barrio A, Maqbool K, Sayyab S, Schwochow D, Wang C, Carlborg Ö, Jern P, Jørgensen CB, Archibald AL, Fredholm M, Groenen MA, Andersson L.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19529-36. doi: 10.1073/pnas.1217149109. Epub 2012 Nov 14.

PMID:
23151514
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Development of a genetic tool for product regulation in the diverse British pig breed market.

Wilkinson S, Archibald AL, Haley CS, Megens HJ, Crooijmans RP, Groenen MA, Wiener P, Ogden R.

BMC Genomics. 2012 Nov 15;13:580. doi: 10.1186/1471-2164-13-580.

PMID:
23150935
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

USP18 restricts PRRSV growth through alteration of nuclear translocation of NF-κB p65 and p50 in MARC-145 cells.

Xu D, Lillico SG, Barnett MW, Whitelaw CB, Archibald AL, Ait-Ali T.

Virus Res. 2012 Oct;169(1):264-7. doi: 10.1016/j.virusres.2012.07.002. Epub 2012 Jul 13.

PMID:
22796444
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Detection of a quantitative trait locus associated with resistance to Ascaris suum infection in pigs.

Skallerup P, Nejsum P, Jørgensen CB, Göring HH, Karlskov-Mortensen P, Archibald AL, Fredholm M, Thamsborg SM.

Int J Parasitol. 2012 Apr;42(4):383-91.

PMID:
22619754
[PubMed - indexed for MEDLINE]

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