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Results: 16

1.

Genome sequence of mungbean and insights into evolution within Vigna species.

Kang YJ, Kim SK, Kim MY, Lestari P, Kim KH, Ha BK, Jun TH, Hwang WJ, Lee T, Lee J, Shim S, Yoon MY, Jang YE, Han KS, Taeprayoon P, Yoon N, Somta P, Tanya P, Kim KS, Gwag JG, Moon JK, Lee YH, Park BS, Bombarely A, Doyle JJ, Jackson SA, Schafleitner R, Srinives P, Varshney RK, Lee SH.

Nat Commun. 2014 Nov 11;5:5443. doi: 10.1038/ncomms6443.

PMID:
25384727
[PubMed - in process]
Free PMC Article
2.

The genetic architecture of seed composition in soybean is refined by genome-wide association scans across multiple populations.

Vaughn JN, Nelson RL, Song Q, Cregan PB, Li Z.

G3 (Bethesda). 2014 Sep 22;4(11):2283-94. doi: 10.1534/g3.114.013433.

PMID:
25246241
[PubMed - in process]
Free PMC Article
3.

Genomewide association studies for 50 agronomic traits in peanut using the 'reference set' comprising 300 genotypes from 48 countries of the semi-arid tropics of the world.

Pandey MK, Upadhyaya HD, Rathore A, Vadez V, Sheshshayee MS, Sriswathi M, Govil M, Kumar A, Gowda MV, Sharma S, Hamidou F, Kumar VA, Khera P, Bhat RS, Khan AW, Singh S, Li H, Monyo E, Nadaf HL, Mukri G, Jackson SA, Guo B, Liang X, Varshney RK.

PLoS One. 2014 Aug 20;9(8):e105228. doi: 10.1371/journal.pone.0105228. eCollection 2014.

PMID:
25140620
[PubMed - in process]
Free PMC Article
4.

Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris).

Gao D, Abernathy B, Rohksar D, Schmutz J, Jackson SA.

Front Plant Sci. 2014 Jul 11;5:339. doi: 10.3389/fpls.2014.00339. eCollection 2014.

PMID:
25071814
[PubMed]
Free PMC Article
5.

Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean.

Bellucci E, Bitocchi E, Ferrarini A, Benazzo A, Biagetti E, Klie S, Minio A, Rau D, Rodriguez M, Panziera A, Venturini L, Attene G, Albertini E, Jackson SA, Nanni L, Fernie AR, Nikoloski Z, Bertorelle G, Delledonne M, Papa R.

Plant Cell. 2014 May 21;26(5):1901-1912. [Epub ahead of print]

PMID:
24850850
[PubMed - as supplied by publisher]
Free PMC Article
6.

An R package for SNP marker-based parent-offspring tests.

Abdel-Haleem H, Ji P, Boerma HR, Li Z.

Plant Methods. 2013 Nov 19;9(1):44. doi: 10.1186/1746-4811-9-44.

PMID:
24245988
[PubMed]
Free PMC Article
7.

Functional and structural divergence of an unusual LTR retrotransposon family in plants.

Gao D, Jimenez-Lopez JC, Iwata A, Gill N, Jackson SA.

PLoS One. 2012;7(10):e48595. doi: 10.1371/journal.pone.0048595. Epub 2012 Oct 31.

PMID:
23119066
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A highly conserved, small LTR retrotransposon that preferentially targets genes in grass genomes.

Gao D, Chen J, Chen M, Meyers BC, Jackson S.

PLoS One. 2012;7(2):e32010. doi: 10.1371/journal.pone.0032010. Epub 2012 Feb 16.

PMID:
22359654
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

SNP discovery and development of a high-density genotyping array for sunflower.

Bachlava E, Taylor CA, Tang S, Bowers JE, Mandel JR, Burke JM, Knapp SJ.

PLoS One. 2012;7(1):e29814. doi: 10.1371/journal.pone.0029814. Epub 2012 Jan 4.

PMID:
22238659
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

The rice miniature inverted repeat transposable element mPing is an effective insertional mutagen in soybean.

Hancock CN, Zhang F, Floyd K, Richardson AO, Lafayette P, Tucker D, Wessler SR, Parrott WA.

Plant Physiol. 2011 Oct;157(2):552-62. doi: 10.1104/pp.111.181206. Epub 2011 Aug 15.

PMID:
21844309
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Preclinical evaluation of a recombinant adeno-associated virus vector expressing human alpha-1 antitrypsin made using a recombinant herpes simplex virus production method.

Chulay JD, Ye GJ, Thomas DL, Knop DR, Benson JM, Hutt JA, Wang G, Humphries M, Flotte TR.

Hum Gene Ther. 2011 Feb;22(2):155-65. doi: 10.1089/hum.2010.118. Epub 2010 Dec 12.

PMID:
20812844
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Transmission ratio distortion results in asymmetric introgression in Louisiana Iris.

Tang S, Okashah RA, Knapp SJ, Arnold ML, Martin NH.

BMC Plant Biol. 2010 Mar 18;10:48. doi: 10.1186/1471-2229-10-48.

PMID:
20298609
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Phylogenetic analyses of peanut resistance gene candidates and screening of different genotypes for polymorphic markers.

Radwan OE, Ahmed TA, Knapp SJ.

Saudi J Biol Sci. 2010 Jan;17(1):43-9. doi: 10.1016/j.sjbs.2009.12.007.

PMID:
23961057
[PubMed]
Free PMC Article
14.

Comparative gene expression profiles between heterotic and non-heterotic hybrids of tetraploid Medicago sativa.

Li X, Wei Y, Nettleton D, Brummer EC.

BMC Plant Biol. 2009 Aug 13;9:107. doi: 10.1186/1471-2229-9-107.

PMID:
19678936
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery.

Peterson DG, Schulze SR, Sciara EB, Lee SA, Bowers JE, Nagel A, Jiang N, Tibbitts DC, Wessler SR, Paterson AH.

Genome Res. 2002 May;12(5):795-807.

PMID:
11997346
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Brassica genomics: a complement to, and early beneficiary of, the Arabidopsis sequence.

Paterson AH, Lan TH, Amasino R, Osborn TC, Quiros C.

Genome Biol. 2001;2(3):REVIEWS1011. Epub 2001 Mar 9. Review.

PMID:
11276431
[PubMed - indexed for MEDLINE]
Free PMC Article

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