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Results: 1 to 20 of 21

1.

Gene Expression, Metabolite and Lipid Profiling in Eco-Indicator Daphnia magna Indicate Diverse Mechanisms of Toxicity by Legacy and Emerging Flame-Retardants.

Scanlan LD, Loguinov AV, Teng Q, Antczak P, Dailey KP, Nowinski DT, Kornbluh J, Lin XX, Lachenauer E, Arai A, Douglas NK, Falciani F, Stapleton HM, Vulpe CD.

Environ Sci Technol. 2015 May 18. [Epub ahead of print]

PMID:
25985095
2.

Stromal transcriptional profiles reveal hierarchies of anatomical site, serum response and disease and identify disease specific pathways.

Filer A, Antczak P, Parsonage GN, Legault HM, O'Toole M, Pearson MJ, Thomas AM, Scheel-Toellner D, Raza K, Buckley CD, Falciani F.

PLoS One. 2015 Mar 25;10(3):e0120917. doi: 10.1371/journal.pone.0120917. eCollection 2015.

3.

A Bayesian model for the identification of differentially expressed genes in Daphnia magna exposed to munition pollutants.

Cassese A, Guindani M, Antczak P, Falciani F, Vannucci M.

Biometrics. 2015 Mar 13. doi: 10.1111/biom.12303. [Epub ahead of print]

PMID:
25771699
4.

Future water quality monitoring--adapting tools to deal with mixtures of pollutants in water resource management.

Altenburger R, Ait-Aissa S, Antczak P, Backhaus T, Barceló D, Seiler TB, Brion F, Busch W, Chipman K, López de Alda M, Umbuzeiro Gde A, Escher BI, Falciani F, Faust M, Focks A, Hilscherova K, Hollender J, Hollert H, Jäger F, Jahnke A, Kortenkamp A, Krauss M, Lemkine GF, Munthe J, Neumann S, Schymanski EL, Scrimshaw M, Segner H, Slobodnik J, Smedes F, Kughathas S, Teodorovic I, Tindall AJ, Tollefsen KE, Walz KH, Williams TD, Van den Brink PJ, van Gils J, Vrana B, Zhang X, Brack W.

Sci Total Environ. 2015 Apr 15;512-513:540-51. doi: 10.1016/j.scitotenv.2014.12.057. Epub 2015 Jan 31.

PMID:
25644849
5.

The COPD Knowledge Base: enabling data analysis and computational simulation in translational COPD research.

Cano I, Tényi Á, Schueller C, Wolff M, Huertas Migueláñez MM, Gomez-Cabrero D, Antczak P, Roca J, Cascante M, Falciani F, Maier D.

J Transl Med. 2014 Nov 28;12 Suppl 2:S6. doi: 10.1186/1479-5876-12-S2-S6. Epub 2014 Nov 28.

6.

A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD.

Davidsen PK, Herbert JM, Antczak P, Clarke K, Ferrer E, Peinado VI, Gonzalez C, Roca J, Egginton S, Barberá JA, Falciani F.

Genome Med. 2014 Aug 9;6(8):59. doi: 10.1186/s13073-014-0059-5. eCollection 2014.

7.

Silver nanowire exposure results in internalization and toxicity to Daphnia magna.

Scanlan LD, Reed RB, Loguinov AV, Antczak P, Tagmount A, Aloni S, Nowinski DT, Luong P, Tran C, Karunaratne N, Pham D, Lin XX, Falciani F, Higgins CP, Ranville JF, Vulpe CD, Gilbert B.

ACS Nano. 2013 Dec 23;7(12):10681-94. doi: 10.1021/nn4034103. Epub 2013 Dec 5.

8.

Molecular toxicity identification evaluation (mTIE) approach predicts chemical exposure in Daphnia magna.

Antczak P, Jo HJ, Woo S, Scanlan L, Poynton H, Loguinov A, Chan S, Falciani F, Vulpe C.

Environ Sci Technol. 2013 Oct 15;47(20):11747-56. doi: 10.1021/es402819c. Epub 2013 Oct 7.

PMID:
23875995
9.

Gene expression networks underlying ovarian development in wild largemouth bass (Micropterus salmoides).

Martyniuk CJ, Prucha MS, Doperalski NJ, Antczak P, Kroll KJ, Falciani F, Barber DS, Denslow ND.

PLoS One. 2013;8(3):e59093. doi: 10.1371/journal.pone.0059093. Epub 2013 Mar 20.

10.

The experimental renal cell carcinoma model in the chick embryo.

Fergelot P, Bernhard JC, Soulet F, Kilarski WW, Léon C, Courtois N, Deminière C, Herbert JM, Antczak P, Falciani F, Rioux-Leclercq N, Patard JJ, Ferrière JM, Ravaud A, Hagedorn M, Bikfalvi A.

Angiogenesis. 2013 Jan;16(1):181-94. doi: 10.1007/s10456-012-9311-z. Epub 2012 Oct 18.

PMID:
23076651
11.

Identification and pathway mapping of furan target proteins reveal mitochondrial energy production and redox regulation as critical targets of furan toxicity.

Moro S, Chipman JK, Antczak P, Turan N, Dekant W, Falciani F, Mally A.

Toxicol Sci. 2012 Apr;126(2):336-52. doi: 10.1093/toxsci/kfs005. Epub 2012 Jan 12.

12.

Relative overexpression of X-linked genes in mouse embryonic stem cells is consistent with Ohno's hypothesis.

Lin H, Halsall JA, Antczak P, O'Neill LP, Falciani F, Turner BM.

Nat Genet. 2011 Nov 28;43(12):1169-70; author reply 1171-2. doi: 10.1038/ng.992. No abstract available.

PMID:
22120049
13.

Identification and angiogenic role of the novel tumor endothelial marker CLEC14A.

Mura M, Swain RK, Zhuang X, Vorschmitt H, Reynolds G, Durant S, Beesley JF, Herbert JM, Sheldon H, Andre M, Sanderson S, Glen K, Luu NT, McGettrick HM, Antczak P, Falciani F, Nash GB, Nagy ZS, Bicknell R.

Oncogene. 2012 Jan 19;31(3):293-305. doi: 10.1038/onc.2011.233. Epub 2011 Jun 27.

PMID:
21706054
14.

A systems biology approach sheds new light on Escherichia coli acid resistance.

Stincone A, Daudi N, Rahman AS, Antczak P, Henderson I, Cole J, Johnson MD, Lund P, Falciani F.

Nucleic Acids Res. 2011 Sep 1;39(17):7512-28. doi: 10.1093/nar/gkr338. Epub 2011 Jun 19.

15.

A computational framework for gene regulatory network inference that combines multiple methods and datasets.

Gupta R, Stincone A, Antczak P, Durant S, Bicknell R, Bikfalvi A, Falciani F.

BMC Syst Biol. 2011 Apr 13;5:52. doi: 10.1186/1752-0509-5-52.

16.

Analysis of normal-tumour tissue interaction in tumours: prediction of prostate cancer features from the molecular profile of adjacent normal cells.

Trevino V, Tadesse MG, Vannucci M, Al-Shahrour F, Antczak P, Durant S, Bikfalvi A, Dopazo J, Campbell MJ, Falciani F.

PLoS One. 2011 Mar 30;6(3):e16492. doi: 10.1371/journal.pone.0016492.

17.

Reverse engineering adverse outcome pathways.

Perkins EJ, Chipman JK, Edwards S, Habib T, Falciani F, Taylor R, Van Aggelen G, Vulpe C, Antczak P, Loguinov A.

Environ Toxicol Chem. 2011 Jan;30(1):22-38. doi: 10.1002/etc.374.

PMID:
20963852
18.

Gene signatures in wound tissue as evidenced by molecular profiling in the chick embryo model.

Soulet F, Kilarski WW, Antczak P, Herbert J, Bicknell R, Falciani F, Bikfalvi A.

BMC Genomics. 2010 Sep 14;11:495. doi: 10.1186/1471-2164-11-495.

19.

Mapping drug physico-chemical features to pathway activity reveals molecular networks linked to toxicity outcome.

Antczak P, Ortega F, Chipman JK, Falciani F.

PLoS One. 2010 Aug 27;5(8):e12385. doi: 10.1371/journal.pone.0012385.

20.

Novel aspects of the acid response network of E. coli K-12 are revealed by a study of transcriptional dynamics.

Burton NA, Johnson MD, Antczak P, Robinson A, Lund PA.

J Mol Biol. 2010 Sep 3;401(5):726-42. doi: 10.1016/j.jmb.2010.06.054. Epub 2010 Jul 13.

PMID:
20603130
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