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Results: 9

1.

Whole-Genome Sequence of the C57L/J Mouse Inbred Strain.

Ananda G, Takemon Y, Hinerfeld D, Korstanje R.

G3 (Bethesda). 2014 Jul 21. pii: g3.114.012997. doi: 10.1534/g3.114.012997. [Epub ahead of print]

PMID:
25053706
[PubMed - as supplied by publisher]
Free Article
2.

Microsatellite Interruptions Stabilize Primate Genomes and Exist as Population-Specific Single Nucleotide Polymorphisms within Individual Human Genomes.

Ananda G, Hile SE, Breski A, Wang Y, Kelkar Y, Makova KD, Eckert KA.

PLoS Genet. 2014 Jul 17;10(7):e1004498. doi: 10.1371/journal.pgen.1004498. eCollection 2014 Jul.

PMID:
25033203
[PubMed - in process]
Free PMC Article
3.

Segmenting the human genome based on states of neutral genetic divergence.

Kuruppumullage Don P, Ananda G, Chiaromonte F, Makova KD.

Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14699-704. doi: 10.1073/pnas.1221792110. Epub 2013 Aug 19.

PMID:
23959903
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes.

Montgomery SB, Goode DL, Kvikstad E, Albers CA, Zhang ZD, Mu XJ, Ananda G, Howie B, Karczewski KJ, Smith KS, Anaya V, Richardson R, Davis J; 1000 Genomes Project Consortium, MacArthur DG, Sidow A, Duret L, Gerstein M, Makova KD, Marchini J, McVean G, Lunter G.

Genome Res. 2013 May;23(5):749-61. doi: 10.1101/gr.148718.112. Epub 2013 Mar 11.

PMID:
23478400
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Mature microsatellites: mechanisms underlying dinucleotide microsatellite mutational biases in human cells.

Baptiste BA, Ananda G, Strubczewski N, Lutzkanin A, Khoo SJ, Srikanth A, Kim N, Makova KD, Krasilnikova MM, Eckert KA.

G3 (Bethesda). 2013 Mar;3(3):451-63. doi: 10.1534/g3.112.005173. Epub 2013 Mar 1.

PMID:
23450065
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Distinct mutational behaviors differentiate short tandem repeats from microsatellites in the human genome.

Ananda G, Walsh E, Jacob KD, Krasilnikova M, Eckert KA, Chiaromonte F, Makova KD.

Genome Biol Evol. 2013;5(3):606-20. doi: 10.1093/gbe/evs116.

PMID:
23241442
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A genome-wide view of mutation rate co-variation using multivariate analyses.

Ananda G, Chiaromonte F, Makova KD.

Genome Biol. 2011;12(3):R27. doi: 10.1186/gb-2011-12-3-r27. Epub 2011 Mar 22.

PMID:
21426544
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Galaxy: a web-based genome analysis tool for experimentalists.

Blankenberg D, Von Kuster G, Coraor N, Ananda G, Lazarus R, Mangan M, Nekrutenko A, Taylor J.

Curr Protoc Mol Biol. 2010 Jan;Chapter 19:Unit 19.10.1-21. doi: 10.1002/0471142727.mb1910s89.

PMID:
20069535
[PubMed - indexed for MEDLINE]
9.

Windshield splatter analysis with the Galaxy metagenomic pipeline.

Kosakovsky Pond S, Wadhawan S, Chiaromonte F, Ananda G, Chung WY, Taylor J, Nekrutenko A; Galaxy Team.

Genome Res. 2009 Nov;19(11):2144-53. doi: 10.1101/gr.094508.109. Epub 2009 Oct 9.

PMID:
19819906
[PubMed - indexed for MEDLINE]
Free PMC Article

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