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Items: 1 to 20 of 37

1.
2.

Inconsistency of Species Tree Methods under Gene Flow.

Solís-Lemus C, Yang M, Ané C.

Syst Biol. 2016 May 5. pii: syw030. [Epub ahead of print]

PMID:
27151419
3.

Statistical evidence for common ancestry: Application to primates.

Baum DA, Ané C, Larget B, Solís-Lemus C, Ho LS, Boone P, Drummond CP, Bontrager M, Hunter SJ, Saucier W.

Evolution. 2016 Jun;70(6):1354-63. doi: 10.1111/evo.12934. Epub 2016 May 30.

PMID:
27139421
4.

Evaluating and Characterizing Ancient Whole-Genome Duplications in Plants with Gene Count Data.

Tiley GP, Ané C, Burleigh JG.

Genome Biol Evol. 2016 Apr 11;8(4):1023-37. doi: 10.1093/gbe/evw058.

5.

Inferring Phylogenetic Networks with Maximum Pseudolikelihood under Incomplete Lineage Sorting.

Solís-Lemus C, Ané C.

PLoS Genet. 2016 Mar 7;12(3):e1005896. doi: 10.1371/journal.pgen.1005896. eCollection 2016 Mar.

6.

Exploring Tree-Like and Non-Tree-Like Patterns Using Genome Sequences: An Example Using the Inbreeding Plant Species Arabidopsis thaliana (L.) Heynh.

Stenz NW, Larget B, Baum DA, Ané C.

Syst Biol. 2015 Sep;64(5):809-23. doi: 10.1093/sysbio/syv039. Epub 2015 Jun 27.

PMID:
26117705
7.

Bayesian species delimitation combining multiple genes and traits in a unified framework.

Solís-Lemus C, Knowles LL, Ané C.

Evolution. 2015 Feb;69(2):492-507. doi: 10.1111/evo.12582. Epub 2015 Jan 16.

PMID:
25495061
8.

A linear-time algorithm for Gaussian and non-Gaussian trait evolution models.

Ho Ls, Ané C.

Syst Biol. 2014 May;63(3):397-408. doi: 10.1093/sysbio/syu005. Epub 2014 Feb 4.

PMID:
24500037
9.

Computing the joint distribution of tree shape and tree distance for gene tree inference and recombination detection.

Chung Y, Perna NT, Ané C.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Sep-Oct;10(5):1263-74. doi: 10.1109/TCBB.2013.109.

PMID:
24384712
10.

Detecting and locating whole genome duplications on a phylogeny: a probabilistic approach.

Rabier CE, Ta T, Ané C.

Mol Biol Evol. 2014 Mar;31(3):750-62. doi: 10.1093/molbev/mst263. Epub 2013 Dec 19.

11.

Using HSV-1 genome phylogenetics to track past human migrations.

Kolb AW, Ané C, Brandt CR.

PLoS One. 2013 Oct 16;8(10):e76267. doi: 10.1371/journal.pone.0076267. eCollection 2013.

12.

The evolution of hybrid incompatibilities along a phylogeny.

Wang RJ, Ané C, Payseur BA.

Evolution. 2013 Oct;67(10):2905-22. doi: 10.1111/evo.12173. Epub 2013 Jun 20.

13.

Locating evolutionary precursors on a phylogenetic tree.

Marazzi B, Ané C, Simon MF, Delgado-Salinas A, Luckow M, Sanderson MJ.

Evolution. 2012 Dec;66(12):3918-30. doi: 10.1111/j.1558-5646.2012.01720.x. Epub 2012 Aug 6.

PMID:
23206146
14.

Growth and survival parameter estimates and relation to RpoS levels in serotype O157:H7 and non-O157 Shiga toxin-producing Escherichia coli.

Mand TD, Döpfer D, Ingham B, Ané C, Kaspar CW.

J Appl Microbiol. 2013 Jan;114(1):242-55. doi: 10.1111/jam.12021. Epub 2012 Oct 19.

15.

Mapping quantitative trait loci onto a phylogenetic tree.

Broman KW, Kim S, Sen S, Ané C, Payseur BA.

Genetics. 2012 Sep;192(1):267-79. doi: 10.1534/genetics.112.142448. Epub 2012 Jun 28.

16.

Single copy nuclear gene analysis of polyploidy in wild potatoes (Solanum section Petota).

Cai D, Rodríguez F, Teng Y, Ané C, Bonierbale M, Mueller LA, Spooner DM.

BMC Evol Biol. 2012 May 24;12:70. doi: 10.1186/1471-2148-12-70.

17.

Comparison of bulk-tank standard plate count and somatic cell count for Wisconsin dairy farms in three size categories.

Ingham SC, Hu Y, Ané C.

J Dairy Sci. 2011 Aug;94(8):4237-41. doi: 10.3168/jds.2011-4310. Erratum in: J Dairy Sci. 2011 Oct;94(10):5247.

PMID:
21787961
18.

Traumatic intrapericardial diaphragmatic hernia.

Joyeux F, Canaud L, Berthet JP, Ané CM.

Eur J Cardiothorac Surg. 2011 Jul;40(1):e69. doi: 10.1016/j.ejcts.2011.02.016. Epub 2011 Mar 21. No abstract available.

PMID:
21420875
19.

Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.

Chung Y, Ané C.

Syst Biol. 2011 May;60(3):261-75. doi: 10.1093/sysbio/syr003. Epub 2011 Mar 2.

PMID:
21368324
20.

Detecting phylogenetic breakpoints and discordance from genome-wide alignments for species tree reconstruction.

Ané C.

Genome Biol Evol. 2011;3:246-58. doi: 10.1093/gbe/evr013. Epub 2011 Feb 28.

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