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Results: 1 to 20 of 80

1.

The specific alteration of histone methylation profiles by DZNep during early zebrafish development.

Ostrup O, Reiner AH, Aleström P, Collas P.

Biochim Biophys Acta. 2014 Nov;1839(11):1307-15. doi: 10.1016/j.bbagrm.2014.09.013. Epub 2014 Sep 28.

PMID:
25260724
[PubMed - in process]
2.

Zebrafish as a model to study the role of DNA methylation in environmental toxicology.

Kamstra JH, Aleström P, Kooter JM, Legler J.

Environ Sci Pollut Res Int. 2014 Aug 31. [Epub ahead of print]

PMID:
25172464
[PubMed - as supplied by publisher]
3.

Normalization of RNA-sequencing data from samples with varying mRNA levels.

Aanes H, Winata C, Moen LF, Østrup O, Mathavan S, Collas P, Rognes T, Aleström P.

PLoS One. 2014 Feb 25;9(2):e89158. doi: 10.1371/journal.pone.0089158. eCollection 2014.

PMID:
24586560
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Transcriptome dynamics and diversity in the early zebrafish embryo.

Aanes H, Collas P, Aleström P.

Brief Funct Genomics. 2014 Mar;13(2):95-105. doi: 10.1093/bfgp/elt049. Epub 2013 Dec 12. Review.

PMID:
24335756
[PubMed - indexed for MEDLINE]
5.

Differential transcript isoform usage pre- and post-zygotic genome activation in zebrafish.

Aanes H, Østrup O, Andersen IS, Moen LF, Mathavan S, Collas P, Alestrom P.

BMC Genomics. 2013 May 15;14:331. doi: 10.1186/1471-2164-14-331.

PMID:
23676078
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Epigenetic marking of the zebrafish developmental program.

Andersen IS, Lindeman LC, Reiner AH, Østrup O, Aanes H, Aleström P, Collas P.

Curr Top Dev Biol. 2013;104:85-112. doi: 10.1016/B978-0-12-416027-9.00003-6. Review.

PMID:
23587239
[PubMed - indexed for MEDLINE]
7.

Parental exposure to natural mixtures of POPs reduced embryo production and altered gene transcription in zebrafish embryos.

Lyche JL, Grześ IM, Karlsson C, Nourizadeh-Lillabadi R, Berg V, Kristoffersen AB, Skåre JU, Alestrøm P, Ropstad E.

Aquat Toxicol. 2013 Jan 15;126:424-34. doi: 10.1016/j.aquatox.2012.08.019. Epub 2012 Sep 20.

PMID:
23063069
[PubMed - indexed for MEDLINE]
8.

Developmental features of DNA methylation during activation of the embryonic zebrafish genome.

Andersen IS, Reiner AH, Aanes H, Aleström P, Collas P.

Genome Biol. 2012 Jul 25;13(7):R65. doi: 10.1186/gb-2012-13-7-r65.

PMID:
22830626
[PubMed - in process]
Free PMC Article
9.

Natural mixtures of persistent organic pollutants (POPs) suppress ovarian follicle development, liver vitellogenin immunostaining and hepatocyte proliferation in female zebrafish (Danio rerio).

Kraugerud M, Doughty RW, Lyche JL, Berg V, Tremoen NH, Alestrøm P, Aleksandersen M, Ropstad E.

Aquat Toxicol. 2012 Jul 15;116-117:16-23. doi: 10.1016/j.aquatox.2012.02.031. Epub 2012 Mar 5.

PMID:
22459409
[PubMed - indexed for MEDLINE]
10.

Culturable gut microbiota diversity in zebrafish.

Cantas L, Sørby JR, Aleström P, Sørum H.

Zebrafish. 2012 Mar;9(1):26-37. doi: 10.1089/zeb.2011.0712.

PMID:
22428747
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Epigenetic complexity during the zebrafish mid-blastula transition.

Andersen IS, Ostrup O, Lindeman LC, Aanes H, Reiner AH, Mathavan S, Aleström P, Collas P.

Biochem Biophys Res Commun. 2012 Jan 27;417(4):1139-44. doi: 10.1016/j.bbrc.2011.12.077. Epub 2011 Dec 22.

PMID:
22209792
[PubMed - indexed for MEDLINE]
12.

Prepatterning of developmental gene expression by modified histones before zygotic genome activation.

Lindeman LC, Andersen IS, Reiner AH, Li N, Aanes H, Østrup O, Winata C, Mathavan S, Müller F, Aleström P, Collas P.

Dev Cell. 2011 Dec 13;21(6):993-1004. doi: 10.1016/j.devcel.2011.10.008. Epub 2011 Dec 1.

PMID:
22137762
[PubMed - indexed for MEDLINE]
Free Article
13.

Prion protein function and the disturbance of early embryonic development in zebrafish.

Syed M, Nourizadeh-Lillabadi R, Press CM, Alestrøm P.

Prion. 2011 Apr-Jun;5(2):88-92. Epub 2011 Apr 1.

PMID:
21628994
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition.

Aanes H, Winata CL, Lin CH, Chen JP, Srinivasan KG, Lee SG, Lim AY, Hajan HS, Collas P, Bourque G, Gong Z, Korzh V, Aleström P, Mathavan S.

Genome Res. 2011 Aug;21(8):1328-38. doi: 10.1101/gr.116012.110. Epub 2011 May 9.

PMID:
21555364
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Accumulation and effects of natural mixtures of persistent organic pollutants (POP) in Zebrafish after two generations of exposure.

Berg V, Lyche JL, Karlsson C, Stavik B, Nourizadeh-Lillabadi R, Hårdnes N, Skaare JU, Alestrøm P, Lie E, Ropstad E.

J Toxicol Environ Health A. 2011;74(7-9):407-23. doi: 10.1080/15287394.2011.550455.

PMID:
21391088
[PubMed - indexed for MEDLINE]
16.

Natural mixtures of POPs affected body weight gain and induced transcription of genes involved in weight regulation and insulin signaling.

Lyche JL, Nourizadeh-Lillabadi R, Karlsson C, Stavik B, Berg V, Skåre JU, Alestrøm P, Ropstad E.

Aquat Toxicol. 2011 Apr;102(3-4):197-204. doi: 10.1016/j.aquatox.2011.01.017. Epub 2011 Feb 26.

PMID:
21356182
[PubMed - indexed for MEDLINE]
17.

Tiling histone H3 lysine 4 and 27 methylation in zebrafish using high-density microarrays.

Lindeman LC, Reiner AH, Mathavan S, Aleström P, Collas P.

PLoS One. 2010 Dec 20;5(12):e15651. doi: 10.1371/journal.pone.0015651.

PMID:
21187971
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Early embryonic gene expression profiling of zebrafish prion protein (Prp2) morphants.

Nourizadeh-Lillabadi R, Seilø Torgersen J, Vestrheim O, König M, Aleström P, Syed M.

PLoS One. 2010 Oct 22;5(10):e13573. doi: 10.1371/journal.pone.0013573.

PMID:
21042590
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Natural mixtures of persistent organic pollutants (POP) increase weight gain, advance puberty, and induce changes in gene expression associated with steroid hormones and obesity in female zebrafish.

Lyche JL, Nourizadeh-Lillabadi R, Almaas C, Stavik B, Berg V, Skåre JU, Alestrøm P, Ropstad E.

J Toxicol Environ Health A. 2010;73(15):1032-57. doi: 10.1080/15287394.2010.481618.

PMID:
20526952
[PubMed - indexed for MEDLINE]
20.

Chromatin states of developmentally-regulated genes revealed by DNA and histone methylation patterns in zebrafish embryos.

Lindeman LC, Winata CL, Aanes H, Mathavan S, Alestrom P, Collas P.

Int J Dev Biol. 2010;54(5):803-13. doi: 10.1387/ijdb.103081ll.

PMID:
20336603
[PubMed - indexed for MEDLINE]
Free Article

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