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Results: 1 to 20 of 44

1.

Long non-coding RNAs as a source of new peptides.

Ruiz-Orera J, Messeguer X, Subirana JA, Alba MM.

Elife. 2014 Sep 16;3:e03523. doi: 10.7554/eLife.03523.

2.

Uncovering adaptive evolution in the human lineage.

Gayà-Vidal M, Albà MM.

BMC Genomics. 2014 Jul 16;15:599. doi: 10.1186/1471-2164-15-599.

3.

Comparative genomics of mammalian hibernators using gene networks.

Villanueva-Cañas JL, Faherty SL, Yoder AD, Albà MM.

Integr Comp Biol. 2014 Sep;54(3):452-62. doi: 10.1093/icb/icu048. Epub 2014 May 31.

PMID:
24881044
4.

Deciphering the modulation of gene expression by type I and II interferons combining 4sU-tagging, translational arrest and in silico promoter analysis.

Trilling M, Bellora N, Rutkowski AJ, de Graaf M, Dickinson P, Robertson K, Prazeres da Costa O, Ghazal P, Friedel CC, Albà MM, Dölken L.

Nucleic Acids Res. 2013 Sep;41(17):8107-25. doi: 10.1093/nar/gkt589. Epub 2013 Jul 5.

5.

Accelerated evolution after gene duplication: a time-dependent process affecting just one copy.

Pegueroles C, Laurie S, Albà MM.

Mol Biol Evol. 2013 Aug;30(8):1830-42. doi: 10.1093/molbev/mst083. Epub 2013 Apr 26.

6.

Dynamics and adaptive benefits of modular protein evolution.

Bornberg-Bauer E, Albà MM.

Curr Opin Struct Biol. 2013 Jun;23(3):459-66. doi: 10.1016/j.sbi.2013.02.012. Epub 2013 Apr 3. Review.

PMID:
23562500
7.

Emergence of novel domains in proteins.

Toll-Riera M, Albà MM.

BMC Evol Biol. 2013 Feb 20;13:47. doi: 10.1186/1471-2148-13-47.

8.

Improving genome-wide scans of positive selection by using protein isoforms of similar length.

Villanueva-Cañas JL, Laurie S, Albà MM.

Genome Biol Evol. 2013;5(2):457-67. doi: 10.1093/gbe/evt017.

9.

Structure and age jointly influence rates of protein evolution.

Toll-Riera M, Bostick D, Albà MM, Plotkin JB.

PLoS Comput Biol. 2012 May;8(5):e1002542. doi: 10.1371/journal.pcbi.1002542. Epub 2012 May 31.

10.

The human cytomegalovirus-specific UL1 gene encodes a late-phase glycoprotein incorporated in the virion envelope.

Shikhagaie M, Mercé-Maldonado E, Isern E, Muntasell A, Albà MM, López-Botet M, Hengel H, Angulo A.

J Virol. 2012 Apr;86(8):4091-101. doi: 10.1128/JVI.06291-11. Epub 2012 Feb 15.

11.

Sequence shortening in the rodent ancestor.

Laurie S, Toll-Riera M, Radó-Trilla N, Albà MM.

Genome Res. 2012 Mar;22(3):478-85. doi: 10.1101/gr.121897.111. Epub 2011 Nov 29.

12.

Role of low-complexity sequences in the formation of novel protein coding sequences.

Toll-Riera M, Radó-Trilla N, Martys F, Albà MM.

Mol Biol Evol. 2012 Mar;29(3):883-6. doi: 10.1093/molbev/msr263. Epub 2011 Oct 31.

13.

Human cytomegalovirus UL7, a homologue of the SLAM-family receptor CD229, impairs cytokine production.

Engel P, Pérez-Carmona N, Albà MM, Robertson K, Ghazal P, Angulo A.

Immunol Cell Biol. 2011 Oct;89(7):753-66. doi: 10.1038/icb.2011.55. Epub 2011 Jun 14.

PMID:
21670740
14.

Lineage-specific variation in intensity of natural selection in mammals.

Toll-Riera M, Laurie S, Albà MM.

Mol Biol Evol. 2011 Jan;28(1):383-98. doi: 10.1093/molbev/msq206. Epub 2010 Aug 5.

15.

Natural selection drives the accumulation of amino acid tandem repeats in human proteins.

Mularoni L, Ledda A, Toll-Riera M, Albà MM.

Genome Res. 2010 Jun;20(6):745-54. doi: 10.1101/gr.101261.109. Epub 2010 Mar 24.

16.

Heterogeneous patterns of gene-expression diversification in mammalian gene duplicates.

Farré D, Albà MM.

Mol Biol Evol. 2010 Feb;27(2):325-35. doi: 10.1093/molbev/msp242. Epub 2009 Oct 12.

17.

Evolution of primate orphan proteins.

Toll-Riera M, Castelo R, Bellora N, Albà MM.

Biochem Soc Trans. 2009 Aug;37(Pt 4):778-82. doi: 10.1042/BST0370778. Review.

PMID:
19614593
18.

Jagged1 is the pathological link between Wnt and Notch pathways in colorectal cancer.

Rodilla V, Villanueva A, Obrador-Hevia A, Robert-Moreno A, Fernández-Majada V, Grilli A, López-Bigas N, Bellora N, Albà MM, Torres F, Duñach M, Sanjuan X, Gonzalez S, Gridley T, Capella G, Bigas A, Espinosa L.

Proc Natl Acad Sci U S A. 2009 Apr 14;106(15):6315-20. doi: 10.1073/pnas.0813221106. Epub 2009 Mar 26.

19.

Genome-wide analysis of histidine repeats reveals their role in the localization of human proteins to the nuclear speckles compartment.

Salichs E, Ledda A, Mularoni L, Albà MM, de la Luna S.

PLoS Genet. 2009 Mar;5(3):e1000397. doi: 10.1371/journal.pgen.1000397. Epub 2009 Mar 6.

20.

Origin of primate orphan genes: a comparative genomics approach.

Toll-Riera M, Bosch N, Bellora N, Castelo R, Armengol L, Estivill X, Albà MM.

Mol Biol Evol. 2009 Mar;26(3):603-12. doi: 10.1093/molbev/msn281. Epub 2008 Dec 8.

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