Molecular diagnosis of infantile onset inflammatory bowel disease by exome sequencing

Genomics. 2013 Nov-Dec;102(5-6):442-7. doi: 10.1016/j.ygeno.2013.08.008. Epub 2013 Aug 31.

Abstract

Pediatric-onset inflammatory bowel disease (IBD) is known to be associated with severe disease, poor response to therapy, and increased morbidity and mortality. We conducted exome sequencing of two brothers from a non-consanguineous relationship who presented before the age of one with severe infantile-onset IBD, failure to thrive, skin rash, and perirectal abscesses refractory to medical management. We examined the variants discovered in all known IBD-associated and primary immunodeficiency genes in both siblings. The siblings were identified to harbor compound heterozygous mutations in IL10RA (c.784C>T, p.Arg262Cys; c.349C>T, p.Arg117Cys). Upon molecular diagnosis, the proband underwent successful hematopoietic stem cell transplantation and demonstrated marked clinical improvement of all IBD-associated clinical symptoms. Exome sequencing can be an effective tool to aid in the molecular diagnosis of pediatric-onset IBD. We provide additional evidence of the safety and benefit of HSCT for patients with IBD due to mutations in the IL10RA gene.

Keywords: Colitis; Crohn's disease; Exome sequencing; Hematopoietic stem cell transplantation; IL10; IL10RA; Inflammatory bowel disease.

Publication types

  • Case Reports
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Child
  • Exome
  • Genetic Testing*
  • Genetic Variation
  • Hematopoietic Stem Cell Transplantation
  • Humans
  • Infant
  • Inflammatory Bowel Diseases / diagnosis*
  • Inflammatory Bowel Diseases / genetics*
  • Inflammatory Bowel Diseases / therapy
  • Interleukin-10 Receptor alpha Subunit / genetics*
  • Male
  • Molecular Diagnostic Techniques
  • Polymorphism, Single Nucleotide
  • Sequence Analysis, DNA
  • Treatment Outcome

Substances

  • Interleukin-10 Receptor alpha Subunit