Nitrate-dependent [Fe(II)EDTA]2- oxidation by Paracoccus ferrooxidans sp. nov., isolated from a denitrifying bioreactor

Syst Appl Microbiol. 2006 Jun;29(4):276-86. doi: 10.1016/j.syapm.2005.08.001. Epub 2005 Sep 1.

Abstract

Enrichments with [Fe(II)EDTA]2- as electron donor and nitrate or nitrite as electron acceptor were established using an inoculum from a bioreactor performing denitrification. A nitrate-reducing, [Fe(II)EDTA]2- oxidizing strain was isolated and named strain BDN-1. The G + C content of strain BDN-1 was 67%, and the organism was closely affiliated to Paracoccus denitrificans, P. pantotrophus and P. versutus by 16S rRNA sequence comparison. Results from DNA-DNA hybridization, rep-PCR, and whole cell protein analysis gave congruent results confirming the genotypic and phenotypic differences between strain BDN-1 and the other species of Paracoccus. From these results, we considered strain BDN-1 as a novel species for which we propose the name Paracoccus ferrooxidans. Apart from [Fe(II)EDTA]2-, BDN-1 could also use thiosulfate and thiocyanate as inorganic electron donors. Nitrate, nitrite, N2O, [Fe(II)EDTA.NO]2- and oxygen could be used by strain BDN-1 as electron acceptors. Repeated transfer on a culture medium with bicarbonate as the sole carbon source confirmed that strain BDN-1 was a facultative autotroph. [Fe(II)EDTA]2- oxidation dependent denitrification was also performed by other Paracoccus species, that were closely affiliated to P. ferrooxidans.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / analysis
  • Base Composition
  • Bicarbonates / metabolism
  • Bioreactors / microbiology*
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Edetic Acid / metabolism*
  • Ferrous Compounds / metabolism*
  • Genes, rRNA
  • Industrial Microbiology
  • Microscopy, Electron, Transmission
  • Molecular Sequence Data
  • Nitrates / metabolism*
  • Nitrites / metabolism
  • Nitrous Oxide / metabolism
  • Nucleic Acid Hybridization
  • Oxidation-Reduction
  • Paracoccus / classification*
  • Paracoccus / isolation & purification
  • Paracoccus / metabolism*
  • Paracoccus / ultrastructure
  • Phylogeny
  • Polymerase Chain Reaction
  • Proteome / analysis
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Thiocyanates / metabolism
  • Thiosulfates / metabolism

Substances

  • Bacterial Proteins
  • Bicarbonates
  • DNA, Bacterial
  • DNA, Ribosomal
  • Ferrous Compounds
  • Nitrates
  • Nitrites
  • Proteome
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Thiocyanates
  • Thiosulfates
  • Fe(II)-EDTA
  • Edetic Acid
  • Nitrous Oxide
  • thiocyanate

Associated data

  • GENBANK/AY954687