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Results: 6

1.

Integrative analysis of the microbiome and metabolome of the human intestinal mucosal surface reveals exquisite inter-relationships.

McHardy IH, Goudarzi M, Tong M, Ruegger PM, Schwager E, Weger JR, Graeber TG, Sonnenburg JL, Horvath S, Huttenhower C, McGovern DP, Fornace AJ Jr, Borneman J, Braun J.

Microbiome. 2013 Jun 5;1(1):17. doi: 10.1186/2049-2618-1-17.

PMID:
24450808
[PubMed]
Free PMC Article
2.

Intestinal bacteria modify lymphoma incidence and latency by affecting systemic inflammatory state, oxidative stress, and leukocyte genotoxicity.

Yamamoto ML, Maier I, Dang AT, Berry D, Liu J, Ruegger PM, Yang JI, Soto PA, Presley LL, Reliene R, Westbrook AM, Wei B, Loy A, Chang C, Braun J, Borneman J, Schiestl RH.

Cancer Res. 2013 Jul 15;73(14):4222-32. doi: 10.1158/0008-5472.CAN-13-0022.

PMID:
23860718
[PubMed - indexed for MEDLINE]
3.

Correlations between root-associated microorganisms and peach replant disease symptoms in a California soil.

Yang JI, Ruegger PM, McKenry MV, Becker JO, Borneman J.

PLoS One. 2012;7(10):e46420. doi: 10.1371/journal.pone.0046420. Epub 2012 Oct 5.

PMID:
23071565
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology.

Ruegger PM, Bent E, Li W, Jeske DR, Cui X, Braun J, Jiang T, Borneman J.

J Microbiol Methods. 2012 Sep;90(3):235-40. doi: 10.1016/j.mimet.2012.05.013. Epub 2012 May 25.

PMID:
22640891
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Improving probe set selection for microbial community analysis by leveraging taxonomic information of training sequences.

Ruegger PM, Della Vedova G, Jiang T, Borneman J.

BMC Bioinformatics. 2011 Oct 10;12:394. doi: 10.1186/1471-2105-12-394.

PMID:
21985453
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Host-microbe relationships in inflammatory bowel disease detected by bacterial and metaproteomic analysis of the mucosal-luminal interface.

Presley LL, Ye J, Li X, Leblanc J, Zhang Z, Ruegger PM, Allard J, McGovern D, Ippoliti A, Roth B, Cui X, Jeske DR, Elashoff D, Goodglick L, Braun J, Borneman J.

Inflamm Bowel Dis. 2012 Mar;18(3):409-17. doi: 10.1002/ibd.21793. Epub 2011 Jun 22.

PMID:
21698720
[PubMed - indexed for MEDLINE]
Free PMC Article

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