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Results: 1 to 20 of 49

1.

Resonance assignment of PsbP: an extrinsic protein from photosystem II of Spinacia oleracea.

Rathner A, Chandra K, Rathner P, Horničáková M, Schlagnitweit J, Kohoutová J, Ettrich R, Müller N.

Biomol NMR Assign. 2015 Apr 23. [Epub ahead of print]

PMID:
25903141
2.

A refined atomic scale model of the Saccharomyces cerevisiae K(+)-translocation protein Trk1p combined with experimental evidence confirms the role of selectivity filter glycines and other key residues.

Zayats V, Stockner T, Pandey SK, Wörz K, Ettrich R, Ludwig J.

Biochim Biophys Acta. 2015 May;1848(5):1183-95. doi: 10.1016/j.bbamem.2015.02.007. Epub 2015 Feb 14.

PMID:
25687974
3.

Computational study of β-N-acetylhexosaminidase from Talaromyces flavus, a glycosidase with high substrate flexibility.

Kulik N, Slámová K, Ettrich R, Křen V.

BMC Bioinformatics. 2015 Jan 28;16(1):28. doi: 10.1186/s12859-015-0465-8.

4.

Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein.

Reha D, Harish B, Sinha D, Kukacka Z, McSally J, Ettrichova O, Novak P, Carey J, Ettrich R.

J Mol Model. 2014 Sep;20(9):2400. doi: 10.1007/s00894-014-2400-8. Epub 2014 Aug 26.

PMID:
25152065
5.

Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I.

Sinha D, Shamayeva K, Ramasubramani V, Řeha D, Bialevich V, Khabiri M, Guzanová A, Milbar N, Weiserová M, Csefalvay E, Carey J, Ettrich R.

J Mol Model. 2014 Jul;20(7):2334. doi: 10.1007/s00894-014-2334-1. Epub 2014 Jun 28.

PMID:
24972799
6.

Binding-competent states for L-arginine in E. coli arginine repressor apoprotein.

Pandey SK, Řeha D, Zayats V, Melichercik M, Carey J, Ettrich R.

J Mol Model. 2014 Jul;20(7):2330. doi: 10.1007/s00894-014-2330-5. Epub 2014 Jun 21.

PMID:
24952066
7.

Inhibition of GlcNAc-processing glycosidases by C-6-azido-NAG-thiazoline and its derivatives.

Krejzová J, Simon P, Kalachova L, Kulik N, Bojarová P, Marhol P, Pelantová H, Cvačka J, Ettrich R, Slámová K, Křen V.

Molecules. 2014 Mar 20;19(3):3471-88. doi: 10.3390/molecules19033471.

8.

Expression, characterization and homology modeling of a novel eukaryotic GH84 β-N-acetylglucosaminidase from Penicillium chrysogenum.

Slámová K, Kulik N, Fiala M, Krejzová-Hofmeisterová J, Ettrich R, Křen V.

Protein Expr Purif. 2014 Mar;95:204-10. doi: 10.1016/j.pep.2014.01.002. Epub 2014 Jan 14.

PMID:
24434566
9.

1.2 Å resolution crystal structure of Escherichia coli WrbA holoprotein.

Kishko I, Carey J, Reha D, Brynda J, Winkler R, Harish B, Guerra R, Ettrichova O, Kukacka Z, Sheryemyetyeva O, Novak P, Kuty M, Kuta Smatanova I, Ettrich R, Lapkouski M.

Acta Crystallogr D Biol Crystallogr. 2013 Sep;69(Pt 9):1748-57. doi: 10.1107/S0907444913017162. Epub 2013 Aug 15.

PMID:
23999298
10.

Expansion of access tunnels and active-site cavities influence activity of haloalkane dehalogenases in organic cosolvents.

Stepankova V, Khabiri M, Brezovsky J, Pavelka A, Sykora J, Amaro M, Minofar B, Prokop Z, Hof M, Ettrich R, Chaloupkova R, Damborsky J.

Chembiochem. 2013 May 10;14(7):890-7. doi: 10.1002/cbic.201200733. Epub 2013 Apr 5.

PMID:
23564727
11.

Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel.

Koudelakova T, Chaloupkova R, Brezovsky J, Prokop Z, Sebestova E, Hesseler M, Khabiri M, Plevaka M, Kulik D, Kuta Smatanova I, Rezacova P, Ettrich R, Bornscheuer UT, Damborsky J.

Angew Chem Int Ed Engl. 2013 Feb 11;52(7):1959-63. doi: 10.1002/anie.201206708. Epub 2013 Jan 9. No abstract available.

PMID:
23303607
12.

Structural model of lymphocyte receptor NKR-P1C revealed by mass spectrometry and molecular modeling.

Rozbesky D, Sovova Z, Marcoux J, Man P, Ettrich R, Robinson CV, Novak P.

Anal Chem. 2013 Feb 5;85(3):1597-604. doi: 10.1021/ac302860m. Epub 2013 Jan 14.

PMID:
23249299
13.

Raman spectroscopy adds complementary detail to the high-resolution x-ray crystal structure of photosynthetic PsbP from Spinacia oleracea.

Kopecky V Jr, Kohoutova J, Lapkouski M, Hofbauerova K, Sovova Z, Ettrichova O, González-Pérez S, Dulebo A, Kaftan D, Smatanova IK, Revuelta JL, Arellano JB, Carey J, Ettrich R.

PLoS One. 2012;7(10):e46694. doi: 10.1371/journal.pone.0046694. Epub 2012 Oct 5.

14.

Biphasic kinetic behavior of E. coli WrbA, an FMN-dependent NAD(P)H:quinone oxidoreductase.

Kishko I, Harish B, Zayats V, Reha D, Tenner B, Beri D, Gustavsson T, Ettrich R, Carey J.

PLoS One. 2012;7(8):e43902. doi: 10.1371/journal.pone.0043902. Epub 2012 Aug 29.

15.

Interaction of organic solvents with protein structures at protein-solvent interface.

Khabiri M, Minofar B, Brezovský J, Damborský J, Ettrich R.

J Mol Model. 2013 Nov;19(11):4701-11. doi: 10.1007/s00894-012-1507-z. Epub 2012 Jul 4.

PMID:
22760789
16.

Regulation of the transient receptor potential channel TRPA1 by its N-terminal ankyrin repeat domain.

Zayats V, Samad A, Minofar B, Roelofs KE, Stockner T, Ettrich R.

J Mol Model. 2013 Nov;19(11):4689-700. doi: 10.1007/s00894-012-1505-1. Epub 2012 Jul 3.

PMID:
22752543
18.

Charybdotoxin and margatoxin acting on the human voltage-gated potassium channel hKv1.3 and its H399N mutant: an experimental and computational comparison.

Nikouee A, Khabiri M, Grissmer S, Ettrich R.

J Phys Chem B. 2012 May 3;116(17):5132-40. doi: 10.1021/jp2102463. Epub 2012 Apr 19.

PMID:
22490327
19.

Charybdotoxin unbinding from the mKv1.3 potassium channel: a combined computational and experimental study.

Khabiri M, Nikouee A, Cwiklik L, Grissmer S, Ettrich R.

J Phys Chem B. 2011 Oct 6;115(39):11490-500. doi: 10.1021/jp2061909. Epub 2011 Sep 13.

PMID:
21877740
20.

Enzymatic characterization and molecular modeling of an evolutionarily interesting fungal β-N-acetylhexosaminidase.

Ryšlavá H, Kalendová A, Doubnerová V, Skočdopol P, Kumar V, Kukačka Z, Pompach P, Vaněk O, Slámová K, Bojarová P, Kulik N, Ettrich R, Křen V, Bezouška K.

FEBS J. 2011 Jul;278(14):2469-84. doi: 10.1111/j.1742-4658.2011.08173.x. Epub 2011 Jun 1.

PMID:
21564548
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