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Results: 1 to 20 of 51

1.

Solution NMR and molecular dynamics reveal a persistent alpha helix within the dynamic region of PsbQ from photosystem II of higher plants.

Rathner P, Rathner A, Horničáková M, Wohlschlager C, Chandra K, Kohoutová J, Ettrich R, Wimmer R, Müller N.

Proteins. 2015 Sep;83(9):1677-86. doi: 10.1002/prot.24853. Epub 2015 Jul 21.

PMID:
26138376
2.

Functional coupling of duplex translocation to DNA cleavage in a type I restriction enzyme.

Csefalvay E, Lapkouski M, Guzanova A, Csefalvay L, Baikova T, Shevelev I, Bialevich V, Shamayeva K, Janscak P, Kuta Smatanova I, Panjikar S, Carey J, Weiserova M, Ettrich R.

PLoS One. 2015 Jun 3;10(6):e0128700. doi: 10.1371/journal.pone.0128700. eCollection 2015.

3.

Resonance assignment of PsbP: an extrinsic protein from photosystem II of Spinacia oleracea.

Rathner A, Chandra K, Rathner P, Horničáková M, Schlagnitweit J, Kohoutová J, Ettrich R, Müller N.

Biomol NMR Assign. 2015 Apr 23. [Epub ahead of print]

PMID:
25903141
4.

A refined atomic scale model of the Saccharomyces cerevisiae K+-translocation protein Trk1p combined with experimental evidence confirms the role of selectivity filter glycines and other key residues.

Zayats V, Stockner T, Pandey SK, Wörz K, Ettrich R, Ludwig J.

Biochim Biophys Acta. 2015 May;1848(5):1183-95. doi: 10.1016/j.bbamem.2015.02.007. Epub 2015 Feb 14.

PMID:
25687974
5.

Computational study of β-N-acetylhexosaminidase from Talaromyces flavus, a glycosidase with high substrate flexibility.

Kulik N, Slámová K, Ettrich R, Křen V.

BMC Bioinformatics. 2015 Jan 28;16:28. doi: 10.1186/s12859-015-0465-8.

6.

Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein.

Reha D, Harish B, Sinha D, Kukacka Z, McSally J, Ettrichova O, Novak P, Carey J, Ettrich R.

J Mol Model. 2014 Sep;20(9):2400. doi: 10.1007/s00894-014-2400-8. Epub 2014 Aug 26.

PMID:
25152065
7.

Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I.

Sinha D, Shamayeva K, Ramasubramani V, Řeha D, Bialevich V, Khabiri M, Guzanová A, Milbar N, Weiserová M, Csefalvay E, Carey J, Ettrich R.

J Mol Model. 2014 Jul;20(7):2334. doi: 10.1007/s00894-014-2334-1. Epub 2014 Jun 28.

PMID:
24972799
8.

Binding-competent states for L-arginine in E. coli arginine repressor apoprotein.

Pandey SK, Řeha D, Zayats V, Melichercik M, Carey J, Ettrich R.

J Mol Model. 2014 Jul;20(7):2330. doi: 10.1007/s00894-014-2330-5. Epub 2014 Jun 21.

PMID:
24952066
9.

Inhibition of GlcNAc-processing glycosidases by C-6-azido-NAG-thiazoline and its derivatives.

Krejzová J, Simon P, Kalachova L, Kulik N, Bojarová P, Marhol P, Pelantová H, Cvačka J, Ettrich R, Slámová K, Křen V.

Molecules. 2014 Mar 20;19(3):3471-88. doi: 10.3390/molecules19033471.

10.

Expression, characterization and homology modeling of a novel eukaryotic GH84 β-N-acetylglucosaminidase from Penicillium chrysogenum.

Slámová K, Kulik N, Fiala M, Krejzová-Hofmeisterová J, Ettrich R, Křen V.

Protein Expr Purif. 2014 Mar;95:204-10. doi: 10.1016/j.pep.2014.01.002. Epub 2014 Jan 14.

PMID:
24434566
11.

1.2 Å resolution crystal structure of Escherichia coli WrbA holoprotein.

Kishko I, Carey J, Reha D, Brynda J, Winkler R, Harish B, Guerra R, Ettrichova O, Kukacka Z, Sheryemyetyeva O, Novak P, Kuty M, Kuta Smatanova I, Ettrich R, Lapkouski M.

Acta Crystallogr D Biol Crystallogr. 2013 Sep;69(Pt 9):1748-57. doi: 10.1107/S0907444913017162. Epub 2013 Aug 15.

PMID:
23999298
12.

Expansion of access tunnels and active-site cavities influence activity of haloalkane dehalogenases in organic cosolvents.

Stepankova V, Khabiri M, Brezovsky J, Pavelka A, Sykora J, Amaro M, Minofar B, Prokop Z, Hof M, Ettrich R, Chaloupkova R, Damborsky J.

Chembiochem. 2013 May 10;14(7):890-7. doi: 10.1002/cbic.201200733. Epub 2013 Apr 5.

PMID:
23564727
13.

Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel.

Koudelakova T, Chaloupkova R, Brezovsky J, Prokop Z, Sebestova E, Hesseler M, Khabiri M, Plevaka M, Kulik D, Kuta Smatanova I, Rezacova P, Ettrich R, Bornscheuer UT, Damborsky J.

Angew Chem Int Ed Engl. 2013 Feb 11;52(7):1959-63. doi: 10.1002/anie.201206708. Epub 2013 Jan 9. No abstract available.

PMID:
23303607
14.

Structural model of lymphocyte receptor NKR-P1C revealed by mass spectrometry and molecular modeling.

Rozbesky D, Sovova Z, Marcoux J, Man P, Ettrich R, Robinson CV, Novak P.

Anal Chem. 2013 Feb 5;85(3):1597-604. doi: 10.1021/ac302860m. Epub 2013 Jan 14.

PMID:
23249299
15.

Raman spectroscopy adds complementary detail to the high-resolution x-ray crystal structure of photosynthetic PsbP from Spinacia oleracea.

Kopecky V Jr, Kohoutova J, Lapkouski M, Hofbauerova K, Sovova Z, Ettrichova O, González-Pérez S, Dulebo A, Kaftan D, Smatanova IK, Revuelta JL, Arellano JB, Carey J, Ettrich R.

PLoS One. 2012;7(10):e46694. doi: 10.1371/journal.pone.0046694. Epub 2012 Oct 5.

16.

Biphasic kinetic behavior of E. coli WrbA, an FMN-dependent NAD(P)H:quinone oxidoreductase.

Kishko I, Harish B, Zayats V, Reha D, Tenner B, Beri D, Gustavsson T, Ettrich R, Carey J.

PLoS One. 2012;7(8):e43902. doi: 10.1371/journal.pone.0043902. Epub 2012 Aug 29.

17.

Interaction of organic solvents with protein structures at protein-solvent interface.

Khabiri M, Minofar B, Brezovský J, Damborský J, Ettrich R.

J Mol Model. 2013 Nov;19(11):4701-11. doi: 10.1007/s00894-012-1507-z. Epub 2012 Jul 4.

PMID:
22760789
18.

Regulation of the transient receptor potential channel TRPA1 by its N-terminal ankyrin repeat domain.

Zayats V, Samad A, Minofar B, Roelofs KE, Stockner T, Ettrich R.

J Mol Model. 2013 Nov;19(11):4689-700. doi: 10.1007/s00894-012-1505-1. Epub 2012 Jul 3.

PMID:
22752543
20.

Charybdotoxin and margatoxin acting on the human voltage-gated potassium channel hKv1.3 and its H399N mutant: an experimental and computational comparison.

Nikouee A, Khabiri M, Grissmer S, Ettrich R.

J Phys Chem B. 2012 May 3;116(17):5132-40. doi: 10.1021/jp2102463. Epub 2012 Apr 19.

PMID:
22490327
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