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Items: 20

1.

Preparation of next-generation sequencing libraries from damaged DNA.

Briggs AW, Heyn P.

Methods Mol Biol. 2012;840:143-54. doi: 10.1007/978-1-61779-516-9_18.

PMID:
22237532
2.

Library preparation methods for next-generation sequencing: tone down the bias.

van Dijk EL, Jaszczyszyn Y, Thermes C.

Exp Cell Res. 2014 Mar 10;322(1):12-20. doi: 10.1016/j.yexcr.2014.01.008. Epub 2014 Jan 15. Review.

PMID:
24440557
3.

Studying the epigenome using next generation sequencing.

Ku CS, Naidoo N, Wu M, Soong R.

J Med Genet. 2011 Nov;48(11):721-30. doi: 10.1136/jmedgenet-2011-100242. Epub 2011 Aug 8. Review.

PMID:
21825079
4.

Next-generation sequencing fragment library construction.

Podnar J, Deiderick H, Hunicke-Smith S.

Curr Protoc Mol Biol. 2014 Jul 1;107:7.17.1-16. doi: 10.1002/0471142727.mb0717s107. Review.

PMID:
24984855
5.

Library construction for next-generation sequencing: overviews and challenges.

Head SR, Komori HK, LaMere SA, Whisenant T, Van Nieuwerburgh F, Salomon DR, Ordoukhanian P.

Biotechniques. 2014 Feb 1;56(2):61-4, 66, 68, passim. doi: 10.2144/000114133. eCollection 2014. Review.

6.

Next-generation sequencing technologies for environmental DNA research.

Shokralla S, Spall JL, Gibson JF, Hajibabaei M.

Mol Ecol. 2012 Apr;21(8):1794-805. doi: 10.1111/j.1365-294X.2012.05538.x. Review.

PMID:
22486820
7.

Rapid quantification of DNA libraries for next-generation sequencing.

Buehler B, Hogrefe HH, Scott G, Ravi H, Pabón-Peña C, O'Brien S, Formosa R, Happe S.

Methods. 2010 Apr;50(4):S15-8. doi: 10.1016/j.ymeth.2010.01.004. Review.

PMID:
20215015
8.

Next-generation sequencing and its applications in molecular diagnostics.

Su Z, Ning B, Fang H, Hong H, Perkins R, Tong W, Shi L.

Expert Rev Mol Diagn. 2011 Apr;11(3):333-43. doi: 10.1586/erm.11.3. Review.

PMID:
21463242
9.

Next-generation sequencing of phage-displayed peptide libraries.

Matochko WL, Derda R.

Methods Mol Biol. 2015;1248:249-66. doi: 10.1007/978-1-4939-2020-4_17. Review.

PMID:
25616338
10.

Combinational usage of next generation sequencing and qPCR for the analysis of tumor samples.

Loewe RP.

Methods. 2013 Jan;59(1):126-31. doi: 10.1016/j.ymeth.2012.11.002. Epub 2012 Nov 21. Review.

PMID:
23178393
11.

Next Generation Sequencing-based analysis of RNA polymerase functions.

Heyduk T, Heyduk E.

Methods. 2015 Sep 15;86:37-44. doi: 10.1016/j.ymeth.2015.04.030. Epub 2015 May 1. Review.

PMID:
25937393
12.

Setting up next-generation sequencing in the medical laboratory.

Yu B.

Methods Mol Biol. 2014;1168:195-206. doi: 10.1007/978-1-4939-0847-9_11. Review.

PMID:
24870137
13.

[Application of next generation sequencing techniques in plant transcriptome].

Liang Y, Chen SY, Liu GS.

Yi Chuan. 2011 Dec;33(12):1317-26. Review. Chinese.

PMID:
22207377
14.

Structure and function in the uracil-DNA glycosylase superfamily.

Pearl LH.

Mutat Res. 2000 Aug 30;460(3-4):165-81. Review.

PMID:
10946227
15.

Uracil in DNA--general mutagen, but normal intermediate in acquired immunity.

Kavli B, Otterlei M, Slupphaug G, Krokan HE.

DNA Repair (Amst). 2007 Apr 1;6(4):505-16. Epub 2006 Nov 20. Review.

PMID:
17116429
16.

Next-generation sequencing offers new insights into DNA degradation.

Overballe-Petersen S, Orlando L, Willerslev E.

Trends Biotechnol. 2012 Jul;30(7):364-8. doi: 10.1016/j.tibtech.2012.03.007. Epub 2012 Apr 17. Review.

PMID:
22516743
17.

Drug discovery with DNA-encoded chemical libraries.

Buller F, Mannocci L, Scheuermann J, Neri D.

Bioconjug Chem. 2010 Sep 15;21(9):1571-80. doi: 10.1021/bc1001483. Review.

PMID:
20681509
18.

The future of ancient DNA: Technical advances and conceptual shifts.

Hofreiter M, Paijmans JL, Goodchild H, Speller CF, Barlow A, Fortes GG, Thomas JA, Ludwig A, Collins MJ.

Bioessays. 2015 Mar;37(3):284-93. doi: 10.1002/bies.201400160. Epub 2014 Nov 21. Review.

PMID:
25413709
19.

Residue specific contributions to stability and activity inferred from saturation mutagenesis and deep sequencing.

Tripathi A, Varadarajan R.

Curr Opin Struct Biol. 2014 Feb;24:63-71. doi: 10.1016/j.sbi.2013.12.001. Epub 2014 Jan 7. Review.

PMID:
24721454
20.

Ancient DNA damage.

Dabney J, Meyer M, Pääbo S.

Cold Spring Harb Perspect Biol. 2013 Jul 1;5(7). pii: a012567. doi: 10.1101/cshperspect.a012567. Review.

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