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Items: 14

1.

A comprehensively molecular haplotype-resolved genome of a European individual.

Suk EK, McEwen GK, Duitama J, Nowick K, Schulz S, Palczewski S, Schreiber S, Holloway DT, McLaughlin S, Peckham H, Lee C, Huebsch T, Hoehe MR.

Genome Res. 2011 Oct;21(10):1672-85. doi: 10.1101/gr.125047.111. Epub 2011 Aug 3.

2.

Haplotype-resolved genome sequencing: experimental methods and applications.

Snyder MW, Adey A, Kitzman JO, Shendure J.

Nat Rev Genet. 2015 Jun;16(6):344-58. doi: 10.1038/nrg3903. Epub 2015 May 7. Review.

PMID:
25948246
3.

Human inter-individual DNA sequence variation in candidate genes, drug targets, the importance of haplotypes and pharmacogenomics.

Hoehe MR, Timmermann B, Lehrach H.

Curr Pharm Biotechnol. 2003 Dec;4(6):351-78. Review.

PMID:
14683431
4.

The role of haplotypes in candidate gene studies.

Clark AG.

Genet Epidemiol. 2004 Dec;27(4):321-33. Review.

PMID:
15368617
5.

The Human Genome Project--an overview.

Bentley DR.

Med Res Rev. 2000 May;20(3):189-96. Review.

PMID:
10797463
6.

Genesis of ancestral haplotypes: RNA modifications and reverse transcription-mediated polymorphisms.

Steele EJ, Williamson JF, Lester S, Stewart BJ, Millman JA, Carnegie P, Lindley RA, Pain GN, Dawkins RL.

Hum Immunol. 2011 Mar;72(3):283-293.e1. doi: 10.1016/j.humimm.2010.12.005. Epub 2010 Dec 13. Review.

PMID:
21156194
7.

Whole genome sequencing.

Ng PC, Kirkness EF.

Methods Mol Biol. 2010;628:215-26. doi: 10.1007/978-1-60327-367-1_12. Review.

PMID:
20238084
8.

Haplotype phasing: existing methods and new developments.

Browning SR, Browning BL.

Nat Rev Genet. 2011 Sep 16;12(10):703-14. doi: 10.1038/nrg3054. Review.

9.

[Analysis and application of SNP and haplotype in the human genome].

Li J, Pan YC, Li YX, Shi TL.

Yi Chuan Xue Bao. 2005 Aug;32(8):879-89. Review. Chinese.

PMID:
16231744
10.

Trap a gene and find out its function: toward functional genomics in Drosophila.

Lukacsovich T, Yamamoto D.

J Neurogenet. 2001;15(3-4):147-68. Review.

PMID:
12092900
11.

Benchmarking of viral haplotype reconstruction programmes: an overview of the capacities and limitations of currently available programmes.

Schirmer M, Sloan WT, Quince C.

Brief Bioinform. 2014 May;15(3):431-42. doi: 10.1093/bib/bbs081. Epub 2012 Dec 19. Review.

12.

Contact genomics: scaffolding and phasing (meta)genomes using chromosome 3D physical signatures.

Flot JF, Marie-Nelly H, Koszul R.

FEBS Lett. 2015 Oct 7;589(20 Pt A):2966-74. doi: 10.1016/j.febslet.2015.04.034. Epub 2015 Apr 29. Review.

13.

Genomic mutation rates: what high-throughput methods can tell us.

Nishant KT, Singh ND, Alani E.

Bioessays. 2009 Sep;31(9):912-20. doi: 10.1002/bies.200900017. Review.

14.

Genomes.

Brown TA.

2nd edition. Oxford: Wiley-Liss; 2002.

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