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Items: 13

1.

Germ warfare in a microbial mat community: CRISPRs provide insights into the co-evolution of host and viral genomes.

Heidelberg JF, Nelson WC, Schoenfeld T, Bhaya D.

PLoS One. 2009;4(1):e4169. doi: 10.1371/journal.pone.0004169. Epub 2009 Jan 9.

2.

CRISPR/Cas, the immune system of bacteria and archaea.

Horvath P, Barrangou R.

Science. 2010 Jan 8;327(5962):167-70. doi: 10.1126/science.1179555. Review.

PMID:
20056882
3.

Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes.

Al-Attar S, Westra ER, van der Oost J, Brouns SJ.

Biol Chem. 2011 Apr;392(4):277-89. doi: 10.1515/BC.2011.042. Epub 2011 Feb 7. Review.

PMID:
21294681
4.

CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea.

Sorek R, Kunin V, Hugenholtz P.

Nat Rev Microbiol. 2008 Mar;6(3):181-6. Review.

PMID:
18157154
5.

CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation.

Bhaya D, Davison M, Barrangou R.

Annu Rev Genet. 2011;45:273-97. doi: 10.1146/annurev-genet-110410-132430. Review.

PMID:
22060043
6.

Memory of viral infections by CRISPR-Cas adaptive immune systems: acquisition of new information.

Fineran PC, Charpentier E.

Virology. 2012 Dec 20;434(2):202-9. doi: 10.1016/j.virol.2012.10.003. Epub 2012 Nov 2. Review.

7.

Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life.

Prangishvili D, Garrett RA, Koonin EV.

Virus Res. 2006 Apr;117(1):52-67. Epub 2006 Feb 28. Review.

PMID:
16503363
8.

Insights from 20 years of bacterial genome sequencing.

Land M, Hauser L, Jun SR, Nookaew I, Leuze MR, Ahn TH, Karpinets T, Lund O, Kora G, Wassenaar T, Poudel S, Ussery DW.

Funct Integr Genomics. 2015 Mar;15(2):141-61. doi: 10.1007/s10142-015-0433-4. Epub 2015 Feb 27. Review.

9.

The dynamic genetic repertoire of microbial communities.

Wilmes P, Simmons SL, Denef VJ, Banfield JF.

FEMS Microbiol Rev. 2009 Jan;33(1):109-32. doi: 10.1111/j.1574-6976.2008.00144.x. Epub 2008 Nov 24. Review.

10.

Microbial genomics and infectious diseases.

Relman DA.

N Engl J Med. 2011 Jul 28;365(4):347-57. doi: 10.1056/NEJMra1003071. Review. No abstract available.

11.

Measurably evolving pathogens in the genomic era.

Biek R, Pybus OG, Lloyd-Smith JO, Didelot X.

Trends Ecol Evol. 2015 Jun;30(6):306-13. doi: 10.1016/j.tree.2015.03.009. Epub 2015 Apr 14. Review.

PMID:
25887947
12.

Ten years of maintaining and expanding a microbial genome and metagenome analysis system.

Markowitz VM, Chen IM, Chu K, Pati A, Ivanova NN, Kyrpides NC.

Trends Microbiol. 2015 Nov;23(11):730-41. doi: 10.1016/j.tim.2015.07.012. Epub 2015 Oct 14. Review.

PMID:
26439299
13.

The global virome: not as big as we thought?

Ignacio-Espinoza JC, Solonenko SA, Sullivan MB.

Curr Opin Virol. 2013 Oct;3(5):566-71. doi: 10.1016/j.coviro.2013.07.004. Epub 2013 Jul 26. Review.

PMID:
23896279
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